RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 TM2D1Q9BX74 207 aa10.51□□□□□ -0.73
SPG11-203ENST00000535302 LRRC37AA6NMS7 1700 aa10.51□□□□□ -0.73
SPG11-203ENST00000535302 PQLC2LA1A4F0 135 aa10.5□□□□□ -0.73
SPG11-203ENST00000535302 IQCF6A8MYZ5 107 aa10.5□□□□□ -0.73
SPG11-203ENST00000535302 SERF1AO75920 110 aa10.5□□□□□ -0.73
SPG11-203ENST00000535302 TMEM8BA6NDV4 472 aa10.5□□□□□ -0.73
SPG11-203ENST00000535302 SRSF3P84103 164 aaKnown RBP10.5□□□□□ -0.73
SPG11-203ENST00000535302 BRD3OSQ6XYD6 125 aa10.5□□□□□ -0.73
SPG11-203ENST00000535302 TEX29Q8N6K0 151 aa10.5□□□□□ -0.73
SPG11-203ENST00000535302 NEUROG1Q92886 237 aa10.5□□□□□ -0.73
SPG11-203ENST00000535302 WBP1Q96G27 269 aa10.5□□□□□ -0.73
SPG11-203ENST00000535302 INTS1Q8N201 2190 aaKnown RBP10.5□□□□□ -0.73
SPG11-203ENST00000535302 SELLP14151 372 aa10.5□□□□□ -0.73
SPG11-203ENST00000535302 ACTL10Q5JWF8 245 aa10.5□□□□□ -0.73
SPG11-203ENST00000535302 ZNF319Q9P2F9 582 aa10.5□□□□□ -0.73
SPG11-203ENST00000535302 DOCK3Q8IZD9 2030 aa10.5□□□□□ -0.73
SPG11-203ENST00000535302 A0A1B0GTI1 187 aa10.5□□□□□ -0.73
SPG11-203ENST00000535302 CCL1P22362 96 aa10.5□□□□□ -0.73
SPG11-203ENST00000535302 OSR1Q8TAX0 266 aaPredicted RBP10.5□□□□□ -0.73
SPG11-203ENST00000535302 GGTLC3B5MD39 225 aa10.5□□□□□ -0.73
SPG11-203ENST00000535302 ZNF562Q6V9R5 426 aa10.49□□□□□ -0.73
SPG11-203ENST00000535302 DOPEY2Q9Y3R5 2298 aa10.49□□□□□ -0.73
SPG11-203ENST00000535302 NR2C2APQ86WQ0 139 aa10.49□□□□□ -0.73
SPG11-203ENST00000535302 KIF26BQ2KJY2 2108 aa10.49□□□□□ -0.73
SPG11-203ENST00000535302 TRGV1A0A0A0MS02 117 aa10.49□□□□□ -0.73
SPG11-203ENST00000535302 TM4SF5O14894 197 aa10.49□□□□□ -0.73
SPG11-203ENST00000535302 GPX4P36969 197 aaPredicted RBP10.49□□□□□ -0.73
SPG11-203ENST00000535302 CFHR1Q03591 330 aa10.49□□□□□ -0.73
SPG11-203ENST00000535302 ZIC4Q8N9L1 334 aa10.49□□□□□ -0.73
SPG11-203ENST00000535302 MLNRO43193 412 aa10.49□□□□□ -0.73
SPG11-203ENST00000535302 THBDP07204 575 aa10.49□□□□□ -0.73
SPG11-203ENST00000535302 SSC4DQ8WTU2 575 aa10.49□□□□□ -0.73
SPG11-203ENST00000535302 GTF3C1Q12789 2109 aa10.49□□□□□ -0.73
SPG11-203ENST00000535302 THADAQ6YHU6 1953 aa10.49□□□□□ -0.73
SPG11-203ENST00000535302 ZNF329Q86UD4 541 aa10.49□□□□□ -0.73
SPG11-203ENST00000535302 FOXD3Q9UJU5 478 aaPredicted RBP10.49□□□□□ -0.73
SPG11-203ENST00000535302 DOCK11Q5JSL3 2073 aa10.48□□□□□ -0.73
SPG11-203ENST00000535302 NBR2O15453 112 aa10.48□□□□□ -0.73
SPG11-203ENST00000535302 EXOC3-AS1Q8N2X6 119 aa10.48□□□□□ -0.73
SPG11-203ENST00000535302 LINC00312Q9Y6C7 94 aa10.48□□□□□ -0.73
SPG11-203ENST00000535302 OCIAD2Q56VL3 154 aa10.48□□□□□ -0.73
SPG11-203ENST00000535302 LINC00114Q6XXX2 140 aa10.48□□□□□ -0.73
SPG11-203ENST00000535302 METRNQ9UJH8 293 aa10.48□□□□□ -0.73
SPG11-203ENST00000535302 CADP27708 2225 aa10.48□□□□□ -0.73
SPG11-203ENST00000535302 A0A087WX48 190 aa10.48□□□□□ -0.73
SPG11-203ENST00000535302 OR9G9P0C7N8 305 aa10.48□□□□□ -0.73
SPG11-203ENST00000535302 FLVCR1-AS1Q8TAF5 88 aa10.48□□□□□ -0.73
SPG11-203ENST00000535302 PSMG3Q9BT73 122 aaPredicted RBP10.48□□□□□ -0.73
SPG11-203ENST00000535302 TRBV9A0A0B4J1U6 114 aa10.48□□□□□ -0.73
SPG11-203ENST00000535302 IGKV1-9A0A0C4DH69 117 aa10.48□□□□□ -0.73
SPG11-203ENST00000535302 M0R2P5 195 aa10.48□□□□□ -0.73
SPG11-203ENST00000535302 CRIM1Q9NZV1 1036 aa10.48□□□□□ -0.73
SPG11-203ENST00000535302 A0A0A6YYD4 124 aa10.48□□□□□ -0.73
SPG11-203ENST00000535302 TIMM23O14925 209 aa10.48□□□□□ -0.73
SPG11-203ENST00000535302 TOMM40O96008 361 aa10.48□□□□□ -0.73
SPG11-203ENST00000535302 RPL32P62910 135 aaKnown RBP10.48□□□□□ -0.73
SPG11-203ENST00000535302 PAQR4Q8N4S7 273 aaPredicted RBP10.48□□□□□ -0.73
SPG11-203ENST00000535302 RNASE6Q93091 150 aaKnown RBP10.48□□□□□ -0.73
SPG11-203ENST00000535302 BRCA1P38398 1863 aaKnown RBP10.47□□□□□ -0.73
SPG11-203ENST00000535302 SLC25A39Q9BZJ4 359 aaPredicted RBP10.47□□□□□ -0.73
SPG11-203ENST00000535302 ZNF236Q9UL36 1845 aa10.47□□□□□ -0.73
SPG11-203ENST00000535302 GNLYP22749 145 aa10.47□□□□□ -0.73
SPG11-203ENST00000535302 RCHY1Q96PM5 261 aa10.47□□□□□ -0.73
SPG11-203ENST00000535302 IZUMO1RA6ND01 250 aa10.47□□□□□ -0.73
SPG11-203ENST00000535302 MORN2Q502X0 79 aa10.47□□□□□ -0.73
SPG11-203ENST00000535302 DMRT1Q9Y5R6 373 aa10.47□□□□□ -0.73
SPG11-203ENST00000535302 PSME4Q14997 1843 aa10.47□□□□□ -0.73
SPG11-203ENST00000535302 IGKV1D-8A0A087WSZ0 117 aa10.47□□□□□ -0.73
SPG11-203ENST00000535302 PRB2P02812 416 aaPredicted RBP10.47□□□□□ -0.73
SPG11-203ENST00000535302 LINC00518Q8N0U6 118 aa10.47□□□□□ -0.73
SPG11-203ENST00000535302 NRN1Q9NPD7 142 aa10.47□□□□□ -0.73
SPG11-203ENST00000535302 RPUSD1Q9UJJ7 312 aaKnown RBP10.47□□□□□ -0.73
SPG11-203ENST00000535302 TAF1LQ8IZX4 1826 aa10.47□□□□□ -0.73
SPG11-203ENST00000535302 IFI6P09912 130 aa10.47□□□□□ -0.73
SPG11-203ENST00000535302 ZNF883P0CG24 379 aa10.47□□□□□ -0.73
SPG11-203ENST00000535302 ARFGEF3Q5TH69 2177 aa10.47□□□□□ -0.73
SPG11-203ENST00000535302 LY6HO94772 140 aa10.46□□□□□ -0.73
SPG11-203ENST00000535302 CD59P13987 128 aa10.46□□□□□ -0.73
SPG11-203ENST00000535302 ATRAIDQ6UW56 229 aa10.46□□□□□ -0.73
SPG11-203ENST00000535302 ZNF525Q8N782 197 aa10.46□□□□□ -0.73
SPG11-203ENST00000535302 KLHDC3Q9BQ90 382 aa10.46□□□□□ -0.73
SPG11-203ENST00000535302 PRSS22Q9GZN4 317 aa10.46□□□□□ -0.73
SPG11-203ENST00000535302 VSIRQ9H7M9 311 aa10.46□□□□□ -0.73
SPG11-203ENST00000535302 PATJQ8NI35 1801 aa10.46□□□□□ -0.73
SPG11-203ENST00000535302 FABP5P3A8MUU1 101 aa10.46□□□□□ -0.74
SPG11-203ENST00000535302 SMKR1H3BMG3 65 aa10.46□□□□□ -0.74
SPG11-203ENST00000535302 FCN3O75636 299 aa10.46□□□□□ -0.74
SPG11-203ENST00000535302 ANXA2RQ3ZCQ2 193 aa10.46□□□□□ -0.74
SPG11-203ENST00000535302 C10orf55Q5SWW7 151 aa10.46□□□□□ -0.74
SPG11-203ENST00000535302 ARID2Q68CP9 1835 aa10.46□□□□□ -0.74
SPG11-203ENST00000535302 SIGLEC15Q6ZMC9 328 aa10.46□□□□□ -0.74
SPG11-203ENST00000535302 C18orf12Q96KH6 178 aa10.46□□□□□ -0.74
SPG11-203ENST00000535302 DPM2O94777 84 aa10.46□□□□□ -0.74
SPG11-203ENST00000535302 IGHV1-46P01743 117 aa10.46□□□□□ -0.74
SPG11-203ENST00000535302 TCRAP04437 139 aa10.46□□□□□ -0.74
SPG11-203ENST00000535302 UPK2O00526 184 aa10.45□□□□□ -0.74
SPG11-203ENST00000535302 CGB3P0DN86 165 aa10.45□□□□□ -0.74
SPG11-203ENST00000535302 PAX1P15863 534 aa10.45□□□□□ -0.74
SPG11-203ENST00000535302 TMEM133Q9H2Q1 129 aa10.45□□□□□ -0.74
SPG11-203ENST00000535302 COX11Q9Y6N1 276 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms