RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 APOBEC3AP31941 199 aaPredicted RBP7.45□□□□□ -1.22
SF3B2-216ENST00000534765 FAM27E3Q08E93 113 aa7.45□□□□□ -1.22
SF3B2-216ENST00000534765 INO80CQ6PI98 192 aaPredicted RBP7.45□□□□□ -1.22
SF3B2-216ENST00000534765 Q6ZT83 130 aa7.45□□□□□ -1.22
SF3B2-216ENST00000534765 FAM169BQ8N8A8 192 aa7.45□□□□□ -1.22
SF3B2-216ENST00000534765 NPFFR1Q9GZQ6 430 aa7.45□□□□□ -1.22
SF3B2-216ENST00000534765 WNK1Q9H4A3 2382 aa7.45□□□□□ -1.22
SF3B2-216ENST00000534765 A6NJY4 79 aa7.45□□□□□ -1.22
SF3B2-216ENST00000534765 MLNRO43193 412 aa7.45□□□□□ -1.22
SF3B2-216ENST00000534765 HLA-DQA1P01909 254 aa7.45□□□□□ -1.22
SF3B2-216ENST00000534765 ZADH2Q8N4Q0 377 aa7.45□□□□□ -1.22
SF3B2-216ENST00000534765 ARPC1AQ92747 370 aa7.45□□□□□ -1.22
SF3B2-216ENST00000534765 SGK494Q96LW2 274 aa7.45□□□□□ -1.22
SF3B2-216ENST00000534765 AGMATQ9BSE5 352 aa7.45□□□□□ -1.22
SF3B2-216ENST00000534765 TRAPPC2LQ9UL33 140 aa7.45□□□□□ -1.22
SF3B2-216ENST00000534765 RAI1Q7Z5J4 1906 aaPredicted RBP7.44□□□□□ -1.22
SF3B2-216ENST00000534765 IGHV1-18A0A0C4DH31 117 aa7.44□□□□□ -1.22
SF3B2-216ENST00000534765 A0A0G2JRQ6 117 aa7.44□□□□□ -1.22
SF3B2-216ENST00000534765 TEX50A0A1B0GTY4 177 aa7.44□□□□□ -1.22
SF3B2-216ENST00000534765 CEACAM18A8MTB9 384 aa7.44□□□□□ -1.22
SF3B2-216ENST00000534765 MT-ND6P03923 174 aa7.44□□□□□ -1.22
SF3B2-216ENST00000534765 NPPCP23582 126 aa7.44□□□□□ -1.22
SF3B2-216ENST00000534765 ID1P41134 155 aa7.44□□□□□ -1.22
SF3B2-216ENST00000534765 ZNF138P52744 262 aa7.44□□□□□ -1.22
SF3B2-216ENST00000534765 TMPRSS3P57727 454 aa7.44□□□□□ -1.22
SF3B2-216ENST00000534765 PSG7Q13046 419 aa7.44□□□□□ -1.22
SF3B2-216ENST00000534765 SAMD5Q5TGI4 173 aa7.44□□□□□ -1.22
SF3B2-216ENST00000534765 CCDC144NLQ6NUI1 221 aa7.44□□□□□ -1.22
SF3B2-216ENST00000534765 SPSB1Q96BD6 273 aa7.44□□□□□ -1.22
SF3B2-216ENST00000534765 TMSB15BA0A087X1C1 80 aa7.44□□□□□ -1.22
SF3B2-216ENST00000534765 K7EMI3 77 aa7.44□□□□□ -1.22
SF3B2-216ENST00000534765 DEGS1O15121 323 aa7.44□□□□□ -1.22
SF3B2-216ENST00000534765 CECR9P0C854 216 aa7.44□□□□□ -1.22
SF3B2-216ENST00000534765 YPEL3P61236 119 aaPredicted RBP7.44□□□□□ -1.22
SF3B2-216ENST00000534765 VWC2Q2TAL6 325 aa7.44□□□□□ -1.22
SF3B2-216ENST00000534765 LINC00173Q6ZV60 143 aa7.44□□□□□ -1.22
SF3B2-216ENST00000534765 TPRX1Q8N7U7 411 aa7.44□□□□□ -1.22
SF3B2-216ENST00000534765 USF3Q68DE3 2245 aa7.44□□□□□ -1.22
SF3B2-216ENST00000534765 HLA-DRB1P01911 266 aa7.44□□□□□ -1.22
SF3B2-216ENST00000534765 HBZP02008 142 aa7.44□□□□□ -1.22
SF3B2-216ENST00000534765 AMY1AP04745 511 aa7.44□□□□□ -1.22
SF3B2-216ENST00000534765 ASCL4Q6XD76 172 aa7.44□□□□□ -1.22
SF3B2-216ENST00000534765 ZNF826PQ6ZT77 177 aa7.44□□□□□ -1.22
SF3B2-216ENST00000534765 OSR2Q8N2R0 312 aa7.44□□□□□ -1.22
SF3B2-216ENST00000534765 OR4F17Q8NGA8 305 aa7.44□□□□□ -1.22
SF3B2-216ENST00000534765 PP6455Q8WZ26 134 aa7.44□□□□□ -1.22
SF3B2-216ENST00000534765 ZNF479Q96JC4 524 aa7.44□□□□□ -1.22
SF3B2-216ENST00000534765 TMEM147Q9BVK8 224 aa7.44□□□□□ -1.22
SF3B2-216ENST00000534765 SAP30LQ9HAJ7 183 aa7.44□□□□□ -1.22
SF3B2-216ENST00000534765 KCNIP2Q9NS61 270 aa7.44□□□□□ -1.22
SF3B2-216ENST00000534765 ANAPC10Q9UM13 185 aa7.44□□□□□ -1.22
SF3B2-216ENST00000534765 DSCAMO60469 2012 aa7.43□□□□□ -1.22
SF3B2-216ENST00000534765 A0A0G2JNJ9 132 aa7.43□□□□□ -1.22
SF3B2-216ENST00000534765 MBD3L4A6NDZ8 208 aaPredicted RBP7.43□□□□□ -1.22
SF3B2-216ENST00000534765 MBD3L3A6NE82 208 aaPredicted RBP7.43□□□□□ -1.22
SF3B2-216ENST00000534765 MBD3L5A6NJ08 208 aaPredicted RBP7.43□□□□□ -1.22
SF3B2-216ENST00000534765 IGKV3-15P01624 115 aa7.43□□□□□ -1.22
SF3B2-216ENST00000534765 CRYBB3P26998 211 aa7.43□□□□□ -1.22
SF3B2-216ENST00000534765 RPS20P60866 119 aaKnown RBP7.43□□□□□ -1.22
SF3B2-216ENST00000534765 Q0VG73 95 aa7.43□□□□□ -1.22
SF3B2-216ENST00000534765 ODF1Q14990 250 aa7.43□□□□□ -1.22
SF3B2-216ENST00000534765 ACP7Q6ZNF0 438 aa7.43□□□□□ -1.22
SF3B2-216ENST00000534765 MBD3L2Q8NHZ7 208 aaPredicted RBP7.43□□□□□ -1.22
SF3B2-216ENST00000534765 TM2D1Q9BX74 207 aa7.43□□□□□ -1.22
SF3B2-216ENST00000534765 Q9UFV3 132 aa7.43□□□□□ -1.22
SF3B2-216ENST00000534765 SETD2Q9BYW2 2564 aaPredicted RBP7.43□□□□□ -1.22
SF3B2-216ENST00000534765 WNT9BO14905 357 aa7.43□□□□□ -1.22
SF3B2-216ENST00000534765 ID3Q02535 119 aa7.43□□□□□ -1.22
SF3B2-216ENST00000534765 UTF1Q5T230 341 aa7.43□□□□□ -1.22
SF3B2-216ENST00000534765 AMTNQ6UX39 209 aa7.43□□□□□ -1.22
SF3B2-216ENST00000534765 LCNL1Q6ZST4 164 aa7.43□□□□□ -1.22
SF3B2-216ENST00000534765 C11orf53Q8IXP5 236 aa7.43□□□□□ -1.22
SF3B2-216ENST00000534765 OR5A1Q8NGJ0 315 aa7.43□□□□□ -1.22
SF3B2-216ENST00000534765 JMJD8Q96S16 334 aa7.43□□□□□ -1.22
SF3B2-216ENST00000534765 MSRB2Q9Y3D2 182 aa7.43□□□□□ -1.22
SF3B2-216ENST00000534765 IGKV1D-13A0A0B4J2D9 117 aa7.43□□□□□ -1.22
SF3B2-216ENST00000534765 C9orf118A6NHY6 69 aa7.43□□□□□ -1.22
SF3B2-216ENST00000534765 H3BVH4 76 aa7.43□□□□□ -1.22
SF3B2-216ENST00000534765 IGKV1-13P0DP09 117 aa7.43□□□□□ -1.22
SF3B2-216ENST00000534765 GRNP28799 593 aaKnown RBP7.43□□□□□ -1.22
SF3B2-216ENST00000534765 CENPWQ5EE01 88 aa7.43□□□□□ -1.22
SF3B2-216ENST00000534765 LRTM2Q8N967 370 aa7.43□□□□□ -1.22
SF3B2-216ENST00000534765 C5orf30Q96GV9 206 aa7.43□□□□□ -1.22
SF3B2-216ENST00000534765 TMEM140Q9NV12 185 aa7.43□□□□□ -1.22
SF3B2-216ENST00000534765 NHP2Q9NX24 153 aaKnown RBP7.43□□□□□ -1.22
SF3B2-216ENST00000534765 MRPL27Q9P0M9 148 aaKnown RBP7.43□□□□□ -1.22
SF3B2-216ENST00000534765 TRBV7-9A0A0J9YWB2 115 aa7.42□□□□□ -1.22
SF3B2-216ENST00000534765 TGFAP01135 160 aa7.42□□□□□ -1.22
SF3B2-216ENST00000534765 IBA57Q5T440 356 aaKnown RBP7.42□□□□□ -1.22
SF3B2-216ENST00000534765 Q8N976 141 aa7.42□□□□□ -1.22
SF3B2-216ENST00000534765 ZNF355PQ9NSJ1 428 aa7.42□□□□□ -1.22
SF3B2-216ENST00000534765 A1L4Q6 167 aa7.42□□□□□ -1.22
SF3B2-216ENST00000534765 DLL1O00548 723 aa7.42□□□□□ -1.22
SF3B2-216ENST00000534765 CDIPTO14735 213 aa7.42□□□□□ -1.22
SF3B2-216ENST00000534765 PAX9P55771 341 aa7.42□□□□□ -1.22
SF3B2-216ENST00000534765 PCBD1P61457 104 aa7.42□□□□□ -1.22
SF3B2-216ENST00000534765 WFDC2Q14508 124 aa7.42□□□□□ -1.22
SF3B2-216ENST00000534765 MIC13Q5XKP0 118 aa7.42□□□□□ -1.22
SF3B2-216ENST00000534765 PCSK4Q6UW60 755 aa7.42□□□□□ -1.22
SF3B2-216ENST00000534765 C1orf122Q6ZSJ8 110 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms