RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 C1orf194Q5T5A4 169 aa7.69□□□□□ -1.18
CSDE1-217ENST00000534699 TMEM230Q96A57 120 aa7.69□□□□□ -1.18
CSDE1-217ENST00000534699 RNF2Q99496 336 aa7.69□□□□□ -1.18
CSDE1-217ENST00000534699 NDUFA13Q9P0J0 144 aa7.69□□□□□ -1.18
CSDE1-217ENST00000534699 CACNG5Q9UF02 275 aa7.69□□□□□ -1.18
CSDE1-217ENST00000534699 PUS1Q9Y606 427 aaKnown RBP eCLIP7.69□□□□□ -1.18
CSDE1-217ENST00000534699 CEBPZOSA8MTT3 80 aa7.69□□□□□ -1.18
CSDE1-217ENST00000534699 DNASE2O00115 360 aaPredicted RBP7.69□□□□□ -1.18
CSDE1-217ENST00000534699 PINX1Q96BK5 328 aaKnown RBP7.69□□□□□ -1.18
CSDE1-217ENST00000534699 K7EQG2 157 aa7.68□□□□□ -1.18
CSDE1-217ENST00000534699 YIF1AO95070 293 aa7.68□□□□□ -1.18
CSDE1-217ENST00000534699 IGLC1P0CG04 106 aa7.68□□□□□ -1.18
CSDE1-217ENST00000534699 PI3P19957 117 aa7.68□□□□□ -1.18
CSDE1-217ENST00000534699 RAB11AP62491 216 aa7.68□□□□□ -1.18
CSDE1-217ENST00000534699 SP6Q3SY56 376 aa7.68□□□□□ -1.18
CSDE1-217ENST00000534699 RNASE12Q5GAN4 147 aaKnown RBP7.68□□□□□ -1.18
CSDE1-217ENST00000534699 C16orf54Q6UWD8 224 aa7.68□□□□□ -1.18
CSDE1-217ENST00000534699 TOMM5Q8N4H5 51 aa7.68□□□□□ -1.18
CSDE1-217ENST00000534699 A0A0G2JRQ6 117 aa7.68□□□□□ -1.18
CSDE1-217ENST00000534699 LHFPL5Q8TAF8 219 aa7.68□□□□□ -1.18
CSDE1-217ENST00000534699 TRIM63Q969Q1 353 aa7.68□□□□□ -1.18
CSDE1-217ENST00000534699 FNDC4Q9H6D8 234 aaPredicted RBP7.68□□□□□ -1.18
CSDE1-217ENST00000534699 PITX3O75364 302 aa7.67□□□□□ -1.18
CSDE1-217ENST00000534699 IGKV1-17P01599 117 aa7.67□□□□□ -1.18
CSDE1-217ENST00000534699 Q6ZRM9 215 aa7.67□□□□□ -1.18
CSDE1-217ENST00000534699 S100A7AQ86SG5 101 aa7.67□□□□□ -1.18
CSDE1-217ENST00000534699 CCDC190Q86UF4 302 aa7.67□□□□□ -1.18
CSDE1-217ENST00000534699 ST8SIA2Q92186 375 aa7.67□□□□□ -1.18
CSDE1-217ENST00000534699 MS4A6AQ9H2W1 248 aa7.67□□□□□ -1.18
CSDE1-217ENST00000534699 HRH4Q9H3N8 390 aa7.67□□□□□ -1.18
CSDE1-217ENST00000534699 OR10J1P30954 320 aa7.67□□□□□ -1.18
CSDE1-217ENST00000534699 P2RY1P47900 373 aa7.67□□□□□ -1.18
CSDE1-217ENST00000534699 LINC00299Q6ZSB3 139 aa7.67□□□□□ -1.18
CSDE1-217ENST00000534699 C1QTNF4Q9BXJ3 329 aa7.67□□□□□ -1.18
CSDE1-217ENST00000534699 IGHV3-21A0A0B4J1V1 117 aa7.66□□□□□ -1.18
CSDE1-217ENST00000534699 FNDC10F2Z333 226 aa7.66□□□□□ -1.18
CSDE1-217ENST00000534699 PRSS54Q6PEW0 395 aa7.66□□□□□ -1.18
CSDE1-217ENST00000534699 LYG2Q86SG7 212 aa7.66□□□□□ -1.18
CSDE1-217ENST00000534699 DTD1Q8TEA8 209 aa7.66□□□□□ -1.18
CSDE1-217ENST00000534699 GLMPQ8WWB7 406 aa7.66□□□□□ -1.18
CSDE1-217ENST00000534699 SLC35E1Q96K37 410 aa7.66□□□□□ -1.18
CSDE1-217ENST00000534699 TRGV9Q99603 122 aa7.66□□□□□ -1.18
CSDE1-217ENST00000534699 WFDC10AQ9H1F0 79 aa7.66□□□□□ -1.18
CSDE1-217ENST00000534699 RABAC1Q9UI14 185 aa7.66□□□□□ -1.18
CSDE1-217ENST00000534699 COL7A1Q02388 2944 aa7.66□□□□□ -1.18
CSDE1-217ENST00000534699 IGHV3-35A0A0C4DH35 117 aa7.66□□□□□ -1.18
CSDE1-217ENST00000534699 SFT2D2O95562 160 aa7.66□□□□□ -1.18
CSDE1-217ENST00000534699 RBMS2Q15434 407 aaKnown RBP7.66□□□□□ -1.18
CSDE1-217ENST00000534699 GGNBP1Q5YKI7 109 aa7.66□□□□□ -1.18
CSDE1-217ENST00000534699 CEMP1Q6PRD7 247 aaPredicted RBP7.66□□□□□ -1.18
CSDE1-217ENST00000534699 GPR82Q96P67 336 aa7.66□□□□□ -1.18
CSDE1-217ENST00000534699 MEOX2P50222 304 aa7.65□□□□□ -1.18
CSDE1-217ENST00000534699 SUPT4H1P63272 117 aaKnown RBP7.65□□□□□ -1.18
CSDE1-217ENST00000534699 PYDC2Q56P42 97 aa7.65□□□□□ -1.18
CSDE1-217ENST00000534699 SPANXN2Q5MJ10 180 aa7.65□□□□□ -1.18
CSDE1-217ENST00000534699 THAP8Q8NA92 274 aa7.65□□□□□ -1.18
CSDE1-217ENST00000534699 OR1S1Q8NH92 325 aa7.65□□□□□ -1.18
CSDE1-217ENST00000534699 RETNQ9HD89 108 aa7.65□□□□□ -1.18
CSDE1-217ENST00000534699 V9GYH0 126 aa7.65□□□□□ -1.18
CSDE1-217ENST00000534699 C11orf94C9JXX5 98 aa7.65□□□□□ -1.18
CSDE1-217ENST00000534699 IFNA10P01566 189 aa7.65□□□□□ -1.18
CSDE1-217ENST00000534699 RD3LP0DJH9 198 aa7.65□□□□□ -1.18
CSDE1-217ENST00000534699 MIFP14174 115 aa7.65□□□□□ -1.18
CSDE1-217ENST00000534699 RND2P52198 227 aa7.65□□□□□ -1.18
CSDE1-217ENST00000534699 TIGITQ495A1 244 aa7.65□□□□□ -1.18
CSDE1-217ENST00000534699 C4orf46Q504U0 113 aa7.65□□□□□ -1.18
CSDE1-217ENST00000534699 ZFAND6Q6FIF0 208 aa7.65□□□□□ -1.18
CSDE1-217ENST00000534699 TRPT1Q86TN4 253 aaKnown RBP7.65□□□□□ -1.18
CSDE1-217ENST00000534699 STHQ8IWL8 128 aa7.65□□□□□ -1.18
CSDE1-217ENST00000534699 OR51G1Q8NGK1 321 aa7.65□□□□□ -1.18
CSDE1-217ENST00000534699 RBM38Q9H0Z9 239 aaKnown RBP7.65□□□□□ -1.18
CSDE1-217ENST00000534699 RBKSQ9H477 322 aa7.65□□□□□ -1.18
CSDE1-217ENST00000534699 MCUBQ9NWR8 336 aa7.65□□□□□ -1.18
CSDE1-217ENST00000534699 UBQLN2Q9UHD9 624 aa7.65□□□□□ -1.18
CSDE1-217ENST00000534699 NUTF2P61970 127 aaKnown RBP7.65□□□□□ -1.19
CSDE1-217ENST00000534699 SNRPD3P62318 126 aaKnown RBP7.65□□□□□ -1.19
CSDE1-217ENST00000534699 IZUMO4Q1ZYL8 232 aa7.65□□□□□ -1.19
CSDE1-217ENST00000534699 TEX48A0A1B0GUV7 120 aa7.64□□□□□ -1.19
CSDE1-217ENST00000534699 CENPXA8MT69 81 aa7.64□□□□□ -1.19
CSDE1-217ENST00000534699 ZNF207O43670 478 aaKnown RBP7.64□□□□□ -1.19
CSDE1-217ENST00000534699 ID1P41134 155 aa7.64□□□□□ -1.19
CSDE1-217ENST00000534699 NKX2-1P43699 371 aaPredicted RBP7.64□□□□□ -1.19
CSDE1-217ENST00000534699 CENPSQ8N2Z9 138 aa7.64□□□□□ -1.19
CSDE1-217ENST00000534699 OR4D5Q8NGN0 318 aa7.64□□□□□ -1.19
CSDE1-217ENST00000534699 DCANP1Q8TF63 244 aa7.64□□□□□ -1.19
CSDE1-217ENST00000534699 NEU1Q99519 415 aa7.64□□□□□ -1.19
CSDE1-217ENST00000534699 SMIM9A6NGZ8 99 aa7.63□□□□□ -1.19
CSDE1-217ENST00000534699 BUB3O43684 328 aa7.63□□□□□ -1.19
CSDE1-217ENST00000534699 PSMB3P49720 205 aa7.63□□□□□ -1.19
CSDE1-217ENST00000534699 TAS2R30P59541 319 aa7.63□□□□□ -1.19
CSDE1-217ENST00000534699 PXDC1Q5TGL8 231 aa7.63□□□□□ -1.19
CSDE1-217ENST00000534699 COQ8AQ8NI60 647 aa7.63□□□□□ -1.19
CSDE1-217ENST00000534699 RARRES2Q99969 163 aa7.63□□□□□ -1.19
CSDE1-217ENST00000534699 NRN1Q9NPD7 142 aa7.63□□□□□ -1.19
CSDE1-217ENST00000534699 HUWE1Q7Z6Z7 4374 aaKnown RBP7.63□□□□□ -1.19
CSDE1-217ENST00000534699 ZNF705EA8MWA4 302 aaPredicted RBP7.63□□□□□ -1.19
CSDE1-217ENST00000534699 AMBPP02760 352 aa7.63□□□□□ -1.19
CSDE1-217ENST00000534699 DEFB131AP59861 70 aa7.63□□□□□ -1.19
CSDE1-217ENST00000534699 SPINK9Q5DT21 86 aa7.63□□□□□ -1.19
CSDE1-217ENST00000534699 FAAP20Q6NZ36 180 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms