RNA–Protein interactions for RNA: ENST00000534610.5

ATG13-222, Transcript of autophagy related 13, humanhuman

TSL 5

Gene ATG13, Length 1,655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-222ENST00000534610 C9orf152Q5JTZ5 239 aa12.12□□□□□ -0.47
ATG13-222ENST00000534610 ASPHD1Q5U4P2 390 aa12.12□□□□□ -0.47
ATG13-222ENST00000534610 SSX7Q7RTT5 188 aa12.12□□□□□ -0.47
ATG13-222ENST00000534610 SLC35E3Q7Z769 313 aa12.12□□□□□ -0.47
ATG13-222ENST00000534610 IQCF2Q8IXL9 164 aa12.12□□□□□ -0.47
ATG13-222ENST00000534610 OR4X1Q8NH49 305 aa12.12□□□□□ -0.47
ATG13-222ENST00000534610 FAM110DQ8TAY7 271 aaPredicted RBP12.12□□□□□ -0.47
ATG13-222ENST00000534610 PFDN5Q99471 154 aa12.12□□□□□ -0.47
ATG13-222ENST00000534610 SOX21Q9Y651 276 aaPredicted RBP12.12□□□□□ -0.47
ATG13-222ENST00000534610 CR1P17927 2039 aa12.11□□□□□ -0.47
ATG13-222ENST00000534610 ATP6V0E1O15342 81 aa12.11□□□□□ -0.47
ATG13-222ENST00000534610 HMGB3O15347 200 aaKnown RBP12.11□□□□□ -0.47
ATG13-222ENST00000534610 APOC3P02656 99 aa12.11□□□□□ -0.47
ATG13-222ENST00000534610 NPBWR1P48145 328 aa12.11□□□□□ -0.47
ATG13-222ENST00000534610 PSMB3P49720 205 aa12.11□□□□□ -0.47
ATG13-222ENST00000534610 ECSCRQ19T08 205 aa12.11□□□□□ -0.47
ATG13-222ENST00000534610 ZNF506Q5JVG8 444 aa12.11□□□□□ -0.47
ATG13-222ENST00000534610 C9orf139Q6ZV77 190 aa12.11□□□□□ -0.47
ATG13-222ENST00000534610 OR5R1Q8NH85 324 aa12.11□□□□□ -0.47
ATG13-222ENST00000534610 GATAD1Q8WUU5 269 aa12.11□□□□□ -0.47
ATG13-222ENST00000534610 SEC11CQ9BY50 192 aa12.11□□□□□ -0.47
ATG13-222ENST00000534610 DMRT1Q9Y5R6 373 aa12.11□□□□□ -0.47
ATG13-222ENST00000534610 IGLV11-55A0A075B6I3 123 aa12.1□□□□□ -0.47
ATG13-222ENST00000534610 TRAV30A0A087WSZ9 112 aa12.1□□□□□ -0.47
ATG13-222ENST00000534610 SMAD7O15105 426 aaKnown RBP12.1□□□□□ -0.47
ATG13-222ENST00000534610 CXorf1O96002 111 aa12.1□□□□□ -0.47
ATG13-222ENST00000534610 FSHBP01225 129 aa12.1□□□□□ -0.47
ATG13-222ENST00000534610 SFTA3P0C7M3 94 aa12.1□□□□□ -0.47
ATG13-222ENST00000534610 GATA2P23769 480 aaPredicted RBP12.1□□□□□ -0.47
ATG13-222ENST00000534610 MFAP4P55083 255 aa12.1□□□□□ -0.47
ATG13-222ENST00000534610 RIPPLY3P57055 190 aa12.1□□□□□ -0.47
ATG13-222ENST00000534610 FAM78BQ5VT40 261 aa12.1□□□□□ -0.47
ATG13-222ENST00000534610 CCDC28AQ8IWP9 274 aa12.1□□□□□ -0.47
ATG13-222ENST00000534610 SLC35B3Q9H1N7 401 aa12.1□□□□□ -0.47
ATG13-222ENST00000534610 DNAJC4Q9NNZ3 241 aa12.1□□□□□ -0.47
ATG13-222ENST00000534610 MANBALQ9NQG1 85 aa12.1□□□□□ -0.47
ATG13-222ENST00000534610 ZNF355PQ9NSJ1 428 aa12.1□□□□□ -0.47
ATG13-222ENST00000534610 COX7A2P2O60397 106 aa12.1□□□□□ -0.47
ATG13-222ENST00000534610 CLN5O75503 358 aa12.1□□□□□ -0.47
ATG13-222ENST00000534610 HSPB1P04792 205 aaKnown RBP12.1□□□□□ -0.47
ATG13-222ENST00000534610 TAS2R45P59539 299 aa12.1□□□□□ -0.47
ATG13-222ENST00000534610 RARRES2Q99969 163 aa12.1□□□□□ -0.47
ATG13-222ENST00000534610 MRPL36Q9P0J6 103 aaKnown RBP12.1□□□□□ -0.47
ATG13-222ENST00000534610 VAX2Q9UIW0 290 aa12.1□□□□□ -0.47
ATG13-222ENST00000534610 FUT9Q9Y231 359 aa12.1□□□□□ -0.47
ATG13-222ENST00000534610 IGKV1D-37A0A075B6S9 117 aa12.09□□□□□ -0.47
ATG13-222ENST00000534610 ELOA3CA0A087WX78 387 aaPredicted RBP12.09□□□□□ -0.47
ATG13-222ENST00000534610 LOC102723971A0A1B0GUV8 181 aa12.09□□□□□ -0.47
ATG13-222ENST00000534610 K7EIM0 57 aa12.09□□□□□ -0.47
ATG13-222ENST00000534610 STAG3L2P0CL84 134 aa12.09□□□□□ -0.47
ATG13-222ENST00000534610 STAG3L3P0CL85 134 aa12.09□□□□□ -0.47
ATG13-222ENST00000534610 BCL2P10415 239 aa12.09□□□□□ -0.47
ATG13-222ENST00000534610 DEFA5Q01523 94 aa12.09□□□□□ -0.47
ATG13-222ENST00000534610 ZNF90Q03938 601 aa12.09□□□□□ -0.47
ATG13-222ENST00000534610 BCL6BQ8N143 479 aaPredicted RBP12.09□□□□□ -0.47
ATG13-222ENST00000534610 RXFP4Q8TDU9 374 aa12.09□□□□□ -0.47
ATG13-222ENST00000534610 FANCD2OSQ96PS1 177 aa12.09□□□□□ -0.47
ATG13-222ENST00000534610 SCRT1Q9BWW7 348 aa12.09□□□□□ -0.47
ATG13-222ENST00000534610 MRPL32Q9BYC8 188 aaKnown RBP12.09□□□□□ -0.47
ATG13-222ENST00000534610 TECRQ9NZ01 308 aaKnown RBP12.09□□□□□ -0.47
ATG13-222ENST00000534610 TRAV41A0A0B4J266 112 aa12.08□□□□□ -0.48
ATG13-222ENST00000534610 PLXNB1O43157 2135 aa12.08□□□□□ -0.48
ATG13-222ENST00000534610 GNG7O60262 68 aa12.08□□□□□ -0.48
ATG13-222ENST00000534610 C10orf113Q5VZT2 155 aa12.08□□□□□ -0.48
ATG13-222ENST00000534610 SEPSECSQ9HD40 501 aaKnown RBP12.08□□□□□ -0.48
ATG13-222ENST00000534610 FBXL7Q9UJT9 491 aa12.08□□□□□ -0.48
ATG13-222ENST00000534610 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.08□□□□□ -0.484e-7■■■■□ 25.8
ATG13-222ENST00000534610 MDFIC2A0A1B0GVS7 189 aa12.07□□□□□ -0.48
ATG13-222ENST00000534610 SH2D7A6NKC9 451 aaPredicted RBP12.07□□□□□ -0.48
ATG13-222ENST00000534610 EIF3GO75821 320 aaKnown RBP eCLIP12.07□□□□□ -0.48
ATG13-222ENST00000534610 OR2J3O76001 311 aa12.07□□□□□ -0.48
ATG13-222ENST00000534610 AMY1AP04745 511 aa12.07□□□□□ -0.48
ATG13-222ENST00000534610 OR5G3P0C626 314 aa12.07□□□□□ -0.48
ATG13-222ENST00000534610 IER3P46695 156 aa12.07□□□□□ -0.48
ATG13-222ENST00000534610 CRIP2P52943 208 aaPredicted RBP12.07□□□□□ -0.48
ATG13-222ENST00000534610 ICAM4Q14773 271 aa12.07□□□□□ -0.48
ATG13-222ENST00000534610 Q71RC1 249 aaPredicted RBP12.07□□□□□ -0.48
ATG13-222ENST00000534610 SVBPQ8N300 66 aa12.07□□□□□ -0.48
ATG13-222ENST00000534610 VN1R17PQ8TDU5 208 aa12.07□□□□□ -0.48
ATG13-222ENST00000534610 TXN2Q99757 166 aa12.07□□□□□ -0.48
ATG13-222ENST00000534610 C21orf62Q9NYP8 219 aa12.07□□□□□ -0.48
ATG13-222ENST00000534610 IGHG2P01859 326 aa12.06□□□□□ -0.48
ATG13-222ENST00000534610 IGLC1P0CG04 106 aa12.06□□□□□ -0.48
ATG13-222ENST00000534610 Q56UQ5 140 aa12.06□□□□□ -0.48
ATG13-222ENST00000534610 C10orf91Q5T1B1 145 aa12.06□□□□□ -0.48
ATG13-222ENST00000534610 S100A7AQ86SG5 101 aa12.06□□□□□ -0.48
ATG13-222ENST00000534610 ZNF48Q96MX3 618 aaPredicted RBP12.06□□□□□ -0.48
ATG13-222ENST00000534610 TMPRSS5Q9H3S3 457 aa12.06□□□□□ -0.48
ATG13-222ENST00000534610 GAR1Q9NY12 217 aaKnown RBP12.06□□□□□ -0.48
ATG13-222ENST00000534610 CARHSP1Q9Y2V2 147 aaKnown RBP12.06□□□□□ -0.48
ATG13-222ENST00000534610 DNHD1Q96M86 4753 aa12.06□□□□□ -0.48
ATG13-222ENST00000534610 LINC01548A6NM66 108 aa12.06□□□□□ -0.48
ATG13-222ENST00000534610 C9JQL5 133 aa12.06□□□□□ -0.48
ATG13-222ENST00000534610 HYPMO75409 117 aa12.06□□□□□ -0.48
ATG13-222ENST00000534610 NDUFB8O95169 186 aa12.06□□□□□ -0.48
ATG13-222ENST00000534610 IGHV4-59P01825 116 aa12.06□□□□□ -0.48
ATG13-222ENST00000534610 IGF1P05019 195 aa12.06□□□□□ -0.48
ATG13-222ENST00000534610 RD3LP0DJH9 198 aa12.06□□□□□ -0.48
ATG13-222ENST00000534610 ARL14EPLP0DKL9 152 aa12.06□□□□□ -0.48
ATG13-222ENST00000534610 C8orf88P0DMB2 117 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms