RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 IGLV2-23P01705 113 aa2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 HLA-DQB1P01920 261 aa2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 RLN2P04090 185 aa2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 CD74P04233 296 aa2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 CRYGBP07316 175 aa2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 SAA2P0DJI9 122 aaPredicted RBP2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 CXCL2P19875 107 aa2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 AADACP22760 399 aa2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 FGF9P31371 208 aaPredicted RBP2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 BTCP35070 178 aa2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 LGALS7P47929 136 aa2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 AKR1C2P52895 323 aa2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 KRTAP10-1P60331 282 aa2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 S100A10P60903 97 aa2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 ZNF85Q03923 595 aa2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 AKR1C1Q04828 323 aa2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 KISS1Q15726 138 aa2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 ANKRD55Q3KP44 614 aa2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 LGALSLQ3ZCW2 172 aaPredicted RBP2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 CDNFQ49AH0 187 aa2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 CLLU1Q5K131 121 aa2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 AADACL4Q5VUY2 407 aa2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 HACD4Q5VWC8 232 aa2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 RPL13AP3Q6NVV1 102 aa2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 WDR73Q6P4I2 378 aa2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 ZNF497Q6ZNH5 498 aa2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 TPRA1Q86W33 373 aa2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 TMEM17Q86X19 198 aa2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 GPHB5Q86YW7 130 aa2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 ZFP82Q8N141 532 aa2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 C6orf223Q8N319 242 aa2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 GBGT1Q8N5D6 347 aa2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 JAGN1Q8N5M9 183 aa2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 NKAIN3Q8N8D7 197 aa2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 ZNF383Q8NA42 475 aa2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 ADAD2Q8NCV1 583 aaKnown RBP2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 PXT1Q8NFP0 134 aa2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 OR11H4Q8NGC9 324 aa2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 OR51A2Q8NGJ7 313 aa2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 OR13C3Q8NGS6 347 aa2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 OR5AK2Q8NH90 309 aa2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 ASB17Q8WXJ9 295 aa2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 THRSPQ92748 146 aa2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 FRZBQ92765 325 aa2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 GALNT14Q96FL9 552 aa2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 S100A16Q96FQ6 103 aaKnown RBP2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 GRAMD2BQ96HH9 432 aa2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 TSNAXQ99598 290 aaKnown RBP2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 C7orf50Q9BRJ6 194 aaKnown RBP2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 MARVELD1Q9BSK0 173 aa2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 NDUFAF3Q9BU61 184 aa2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 ZNF471Q9BX82 626 aaPredicted RBP2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 IFI27L2Q9H2X8 130 aa2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 TMEM231Q9H6L2 316 aa2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 TAF9BQ9HBM6 251 aa2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 CLEC5AQ9NY25 188 aa2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 ABRACLQ9P1F3 81 aa2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 RCC2Q9P258 522 aaKnown RBP2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 COPZ2Q9P299 210 aa2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 CKLFQ9UBR5 152 aa2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 ELF5Q9UKW6 265 aaPredicted RBP2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 TRAPPC2LQ9UL33 140 aa2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 ST3GAL6Q9Y274 331 aa2.09□□□□□ -2.07
CHMP4A-208ENST00000534106 IGLV5-37A0A075B6J1 123 aa2.08□□□□□ -2.08
CHMP4A-208ENST00000534106 IGHV3OR16-13A0A075B7E8 117 aa2.08□□□□□ -2.08
CHMP4A-208ENST00000534106 IGHV3-49A0A0A0MS15 119 aa2.08□□□□□ -2.08
CHMP4A-208ENST00000534106 TRBV9A0A0B4J1U6 114 aa2.08□□□□□ -2.08
CHMP4A-208ENST00000534106 IGHV3-74A0A0B4J1X5 117 aa2.08□□□□□ -2.08
CHMP4A-208ENST00000534106 A0A0B4J2A0 478 aa2.08□□□□□ -2.08
CHMP4A-208ENST00000534106 NBDYA0A0U1RRE5 68 aa2.08□□□□□ -2.08
CHMP4A-208ENST00000534106 A0A1B0GV50 99 aa2.08□□□□□ -2.08
CHMP4A-208ENST00000534106 C7orf66A4D0T2 115 aa2.08□□□□□ -2.08
CHMP4A-208ENST00000534106 E7EUB6 86 aa2.08□□□□□ -2.08
CHMP4A-208ENST00000534106 F8W036 122 aa2.08□□□□□ -2.08
CHMP4A-208ENST00000534106 H3BUA1 57 aa2.08□□□□□ -2.08
CHMP4A-208ENST00000534106 GABARAPH6UMI1 98 aa2.08□□□□□ -2.08
CHMP4A-208ENST00000534106 TXNL1O43396 289 aa2.08□□□□□ -2.08
CHMP4A-208ENST00000534106 GGCTO75223 188 aaKnown RBP2.08□□□□□ -2.08
CHMP4A-208ENST00000534106 SC5DO75845 299 aa2.08□□□□□ -2.08
CHMP4A-208ENST00000534106 RAB3DO95716 219 aa2.08□□□□□ -2.08
CHMP4A-208ENST00000534106 CTSDP07339 412 aaPredicted RBP2.08□□□□□ -2.08
CHMP4A-208ENST00000534106 GIPP09681 153 aaPredicted RBP2.08□□□□□ -2.08
CHMP4A-208ENST00000534106 SCTP09683 121 aa2.08□□□□□ -2.08
CHMP4A-208ENST00000534106 OR2T7P0C7T2 308 aa2.08□□□□□ -2.08
CHMP4A-208ENST00000534106 AKAIN1P0CW23 69 aa2.08□□□□□ -2.08
CHMP4A-208ENST00000534106 C8orf88P0DMB2 117 aa2.08□□□□□ -2.08
CHMP4A-208ENST00000534106 MYOD1P15172 320 aa2.08□□□□□ -2.08
CHMP4A-208ENST00000534106 PGAM2P15259 253 aa2.08□□□□□ -2.08
CHMP4A-208ENST00000534106 HTN3P15516 51 aa2.08□□□□□ -2.08
CHMP4A-208ENST00000534106 PVALBP20472 110 aaPredicted RBP2.08□□□□□ -2.08
CHMP4A-208ENST00000534106 NFYAP23511 347 aaPredicted RBP2.08□□□□□ -2.08
CHMP4A-208ENST00000534106 MAPK3P27361 379 aaPredicted RBP2.08□□□□□ -2.08
CHMP4A-208ENST00000534106 S100A11P31949 105 aa2.08□□□□□ -2.08
CHMP4A-208ENST00000534106 CEBPGP53567 150 aa2.08□□□□□ -2.08
CHMP4A-208ENST00000534106 EMP1P54849 157 aa2.08□□□□□ -2.08
CHMP4A-208ENST00000534106 SNRPEP62304 92 aaKnown RBP2.08□□□□□ -2.08
CHMP4A-208ENST00000534106 HTD2P86397 168 aa2.08□□□□□ -2.08
CHMP4A-208ENST00000534106 PAX5Q02548 391 aa2.08□□□□□ -2.08
CHMP4A-208ENST00000534106 FGL1Q08830 312 aa2.08□□□□□ -2.08
CHMP4A-208ENST00000534106 PLA2G7Q13093 441 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms