RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 AP3S2P59780 193 aa7.72□□□□□ -1.17
CAPN1-225ENST00000533704 SUPT4H1P63272 117 aaKnown RBP7.72□□□□□ -1.17
CAPN1-225ENST00000533704 KLF9Q13886 244 aaPredicted RBP7.72□□□□□ -1.17
CAPN1-225ENST00000533704 SMCO1Q147U7 214 aa7.72□□□□□ -1.17
CAPN1-225ENST00000533704 AARDQ4LEZ3 155 aa7.72□□□□□ -1.17
CAPN1-225ENST00000533704 C2orf83Q53S99 150 aa7.72□□□□□ -1.17
CAPN1-225ENST00000533704 LEMD1Q68G75 181 aa7.72□□□□□ -1.17
CAPN1-225ENST00000533704 Q6ZNX1 250 aa7.72□□□□□ -1.17
CAPN1-225ENST00000533704 Q6ZWC4 215 aa7.72□□□□□ -1.17
CAPN1-225ENST00000533704 LGI3Q8N145 548 aa7.72□□□□□ -1.17
CAPN1-225ENST00000533704 STXBP6Q8NFX7 210 aa7.72□□□□□ -1.17
CAPN1-225ENST00000533704 OR1S1Q8NH92 325 aa7.72□□□□□ -1.17
CAPN1-225ENST00000533704 RNASEH2CQ8TDP1 164 aaKnown RBP7.72□□□□□ -1.17
CAPN1-225ENST00000533704 IL22RA2Q969J5 263 aa7.72□□□□□ -1.17
CAPN1-225ENST00000533704 MS4A6AQ9H2W1 248 aa7.72□□□□□ -1.17
CAPN1-225ENST00000533704 VSIRQ9H7M9 311 aa7.72□□□□□ -1.17
CAPN1-225ENST00000533704 A0A0B4J2A0 478 aa7.71□□□□□ -1.18
CAPN1-225ENST00000533704 KIR2DL5BA0A0G2JN68 375 aa7.71□□□□□ -1.18
CAPN1-225ENST00000533704 KIR2DL5BA0A0G2JPC4 375 aa7.71□□□□□ -1.18
CAPN1-225ENST00000533704 CXorf65A6NEN9 183 aa7.71□□□□□ -1.18
CAPN1-225ENST00000533704 MPTX1A8MV57 137 aa7.71□□□□□ -1.18
CAPN1-225ENST00000533704 IGKV1-17P01599 117 aa7.71□□□□□ -1.18
CAPN1-225ENST00000533704 CD5P06127 495 aa7.71□□□□□ -1.18
CAPN1-225ENST00000533704 SLC25A4P12235 298 aa7.71□□□□□ -1.18
CAPN1-225ENST00000533704 OR10J1P30954 320 aa7.71□□□□□ -1.18
CAPN1-225ENST00000533704 P2RY1P47900 373 aa7.71□□□□□ -1.18
CAPN1-225ENST00000533704 CCR6P51684 374 aa7.71□□□□□ -1.18
CAPN1-225ENST00000533704 DEFB131AP59861 70 aa7.71□□□□□ -1.18
CAPN1-225ENST00000533704 SRPXP78539 464 aa7.71□□□□□ -1.18
CAPN1-225ENST00000533704 TNFRSF9Q07011 255 aa7.71□□□□□ -1.18
CAPN1-225ENST00000533704 RBMS2Q15434 407 aaKnown RBP7.71□□□□□ -1.18
CAPN1-225ENST00000533704 ZNF79Q15937 498 aa7.71□□□□□ -1.18
CAPN1-225ENST00000533704 ETFRF1Q6IPR1 90 aa7.71□□□□□ -1.18
CAPN1-225ENST00000533704 PRSS54Q6PEW0 395 aa7.71□□□□□ -1.18
CAPN1-225ENST00000533704 LYG2Q86SG7 212 aa7.71□□□□□ -1.18
CAPN1-225ENST00000533704 NOXA1Q86UR1 476 aa7.71□□□□□ -1.18
CAPN1-225ENST00000533704 KIR2DL5AQ8N109 375 aa7.71□□□□□ -1.18
CAPN1-225ENST00000533704 OR1S2Q8NGQ3 325 aa7.71□□□□□ -1.18
CAPN1-225ENST00000533704 KIR2DL5BQ8NHK3 375 aa7.71□□□□□ -1.18
CAPN1-225ENST00000533704 DTD1Q8TEA8 209 aa7.71□□□□□ -1.18
CAPN1-225ENST00000533704 Q8WTZ3 238 aa7.71□□□□□ -1.18
CAPN1-225ENST00000533704 TMEM170AQ8WVE7 144 aa7.71□□□□□ -1.18
CAPN1-225ENST00000533704 TRIM63Q969Q1 353 aa7.71□□□□□ -1.18
CAPN1-225ENST00000533704 GRAMD2BQ96HH9 432 aa7.71□□□□□ -1.18
CAPN1-225ENST00000533704 RBKSQ9H477 322 aa7.71□□□□□ -1.18
CAPN1-225ENST00000533704 SHPKQ9UHJ6 478 aa7.71□□□□□ -1.18
CAPN1-225ENST00000533704 TP53TG1Q9Y2A0 90 aa7.71□□□□□ -1.18
CAPN1-225ENST00000533704 V9GYH0 126 aa7.71□□□□□ -1.18
CAPN1-225ENST00000533704 CSMD3Q7Z407 3707 aa7.71□□□□□ -1.18
CAPN1-225ENST00000533704 RYR3Q15413 4870 aa7.71□□□□□ -1.18
CAPN1-225ENST00000533704 JTBO76095 146 aa7.7□□□□□ -1.18
CAPN1-225ENST00000533704 IFNA4P05014 189 aa7.7□□□□□ -1.18
CAPN1-225ENST00000533704 IGLC1P0CG04 106 aa7.7□□□□□ -1.18
CAPN1-225ENST00000533704 INPP1P49441 399 aa7.7□□□□□ -1.18
CAPN1-225ENST00000533704 NMSQ5H8A3 153 aa7.7□□□□□ -1.18
CAPN1-225ENST00000533704 FAM24BQ8N5W8 94 aa7.7□□□□□ -1.18
CAPN1-225ENST00000533704 NPIPB3Q92617 1050 aa7.7□□□□□ -1.18
CAPN1-225ENST00000533704 RNF183Q96D59 192 aa7.7□□□□□ -1.18
CAPN1-225ENST00000533704 CSTL1Q9H114 145 aa7.7□□□□□ -1.18
CAPN1-225ENST00000533704 HSPB7Q9UBY9 170 aa7.7□□□□□ -1.18
CAPN1-225ENST00000533704 CACFD1Q9UGQ2 172 aa7.7□□□□□ -1.18
CAPN1-225ENST00000533704 IL4P05112 153 aa7.69□□□□□ -1.18
CAPN1-225ENST00000533704 IAPPP10997 89 aa7.69□□□□□ -1.18
CAPN1-225ENST00000533704 CRYBB3P26998 211 aa7.69□□□□□ -1.18
CAPN1-225ENST00000533704 EWSR1Q01844 656 aaKnown RBP eCLIP7.69□□□□□ -1.18
CAPN1-225ENST00000533704 SPANXN2Q5MJ10 180 aa7.69□□□□□ -1.18
CAPN1-225ENST00000533704 TRAV2A0A0B4J234 112 aa7.68□□□□□ -1.18
CAPN1-225ENST00000533704 LINC00854A0A1B0GVQ3 168 aa7.68□□□□□ -1.18
CAPN1-225ENST00000533704 BOLA2-SMG1P6H3BVE0 249 aa7.68□□□□□ -1.18
CAPN1-225ENST00000533704 CA1P00915 261 aaPredicted RBP7.68□□□□□ -1.18
CAPN1-225ENST00000533704 HOXB5P09067 269 aa7.68□□□□□ -1.18
CAPN1-225ENST00000533704 ZNF688P0C7X2 276 aa7.68□□□□□ -1.18
CAPN1-225ENST00000533704 EIF2B2P49770 351 aaKnown RBP7.68□□□□□ -1.18
CAPN1-225ENST00000533704 YPEL3P61236 119 aaPredicted RBP7.68□□□□□ -1.18
CAPN1-225ENST00000533704 DHRS2Q13268 280 aa7.68□□□□□ -1.18
CAPN1-225ENST00000533704 TMEM128Q5BJH2 165 aa7.68□□□□□ -1.18
CAPN1-225ENST00000533704 TRIQKQ629K1 86 aa7.68□□□□□ -1.18
CAPN1-225ENST00000533704 CCDC190Q86UF4 302 aa7.68□□□□□ -1.18
CAPN1-225ENST00000533704 STHQ8IWL8 128 aa7.68□□□□□ -1.18
CAPN1-225ENST00000533704 SLC35E1Q96K37 410 aa7.68□□□□□ -1.18
CAPN1-225ENST00000533704 BOLA1Q9Y3E2 137 aa7.68□□□□□ -1.18
CAPN1-225ENST00000533704 U3KQ87 197 aa7.68□□□□□ -1.18
CAPN1-225ENST00000533704 STARD9Q9P2P6 4700 aa7.67□□□□□ -1.18
CAPN1-225ENST00000533704 PIGBOS1A0A0B4J2F0 54 aa7.67□□□□□ -1.18
CAPN1-225ENST00000533704 DUXBA0A1W2PPF3 345 aa7.67□□□□□ -1.18
CAPN1-225ENST00000533704 HELTA6NFD8 242 aa7.67□□□□□ -1.18
CAPN1-225ENST00000533704 ZFP92A6NM28 416 aa7.67□□□□□ -1.18
CAPN1-225ENST00000533704 KNCNA6PVL3 124 aa7.67□□□□□ -1.18
CAPN1-225ENST00000533704 K7EQG2 157 aa7.67□□□□□ -1.18
CAPN1-225ENST00000533704 SFT2D2O95562 160 aa7.67□□□□□ -1.18
CAPN1-225ENST00000533704 RD3LP0DJH9 198 aa7.67□□□□□ -1.18
CAPN1-225ENST00000533704 BCAP31P51572 246 aa7.67□□□□□ -1.18
CAPN1-225ENST00000533704 PPP1R1AQ13522 171 aa7.67□□□□□ -1.18
CAPN1-225ENST00000533704 USF2Q15853 346 aaPredicted RBP7.67□□□□□ -1.18
CAPN1-225ENST00000533704 CENPSQ8N2Z9 138 aa7.67□□□□□ -1.18
CAPN1-225ENST00000533704 TMEM217Q8N7C4 229 aa7.67□□□□□ -1.18
CAPN1-225ENST00000533704 OR51G1Q8NGK1 321 aa7.67□□□□□ -1.18
CAPN1-225ENST00000533704 OR11H2Q8NH07 326 aa7.67□□□□□ -1.18
CAPN1-225ENST00000533704 RARRES2Q99969 163 aa7.67□□□□□ -1.18
CAPN1-225ENST00000533704 SLC25A21Q9BQT8 299 aaPredicted RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms