RNA–Protein interactions for RNA: ENST00000533523.5

CHMP4A-207, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best)

Gene CHMP4A, Length 1,266 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-207ENST00000533523 NDUFA4L2Q9NRX3 87 aa11.84□□□□□ -0.51
CHMP4A-207ENST00000533523 THYN1Q9P016 225 aa11.84□□□□□ -0.51
CHMP4A-207ENST00000533523 FXYD6-FXYD2A0A087WZ82 144 aa11.83□□□□□ -0.52
CHMP4A-207ENST00000533523 IGLC7A0M8Q6 106 aa11.83□□□□□ -0.52
CHMP4A-207ENST00000533523 PPP5D1E7EU14 171 aa11.83□□□□□ -0.52
CHMP4A-207ENST00000533523 L7N2F9 121 aa11.83□□□□□ -0.52
CHMP4A-207ENST00000533523 C1QBP02746 253 aa11.83□□□□□ -0.52
CHMP4A-207ENST00000533523 SLC25A4P12235 298 aa11.83□□□□□ -0.52
CHMP4A-207ENST00000533523 EDN2P20800 178 aa11.83□□□□□ -0.52
CHMP4A-207ENST00000533523 VAMP2P63027 116 aa11.83□□□□□ -0.52
CHMP4A-207ENST00000533523 DTD1Q8TEA8 209 aa11.83□□□□□ -0.52
CHMP4A-207ENST00000533523 EEF1AKMT3Q96AZ1 226 aa11.83□□□□□ -0.52
CHMP4A-207ENST00000533523 FANCD2OSQ96PS1 177 aa11.83□□□□□ -0.52
CHMP4A-207ENST00000533523 RAB40CQ96S21 281 aa11.83□□□□□ -0.52
CHMP4A-207ENST00000533523 C11orf1Q9H5F2 150 aa11.83□□□□□ -0.52
CHMP4A-207ENST00000533523 ENY2Q9NPA8 101 aa11.83□□□□□ -0.52
CHMP4A-207ENST00000533523 SELENOKQ9Y6D0 94 aa11.83□□□□□ -0.52
CHMP4A-207ENST00000533523 IGLV11-55A0A075B6I3 123 aa11.82□□□□□ -0.52
CHMP4A-207ENST00000533523 C2orf70A6NJV1 201 aa11.82□□□□□ -0.52
CHMP4A-207ENST00000533523 ZNF785A8K8V0 405 aa11.82□□□□□ -0.52
CHMP4A-207ENST00000533523 TMEM50AO95807 157 aa11.82□□□□□ -0.52
CHMP4A-207ENST00000533523 REG1AP05451 166 aa11.82□□□□□ -0.52
CHMP4A-207ENST00000533523 PVALBP20472 110 aaPredicted RBP11.82□□□□□ -0.52
CHMP4A-207ENST00000533523 ZFP69Q49AA0 526 aa11.82□□□□□ -0.52
CHMP4A-207ENST00000533523 OR11H4Q8NGC9 324 aa11.82□□□□□ -0.52
CHMP4A-207ENST00000533523 OR10W1Q8NGF6 305 aa11.82□□□□□ -0.52
CHMP4A-207ENST00000533523 LINC00476Q8WZB0 136 aa11.82□□□□□ -0.52
CHMP4A-207ENST00000533523 CXorf58Q96LI9 332 aa11.82□□□□□ -0.52
CHMP4A-207ENST00000533523 CIB3Q96Q77 187 aaPredicted RBP11.82□□□□□ -0.52
CHMP4A-207ENST00000533523 HEYLQ9NQ87 328 aaPredicted RBP11.82□□□□□ -0.52
CHMP4A-207ENST00000533523 E5RGE8 158 aa11.81□□□□□ -0.52
CHMP4A-207ENST00000533523 BOLA2-SMG1P6H3BVE0 249 aa11.81□□□□□ -0.52
CHMP4A-207ENST00000533523 GGCTO75223 188 aaKnown RBP11.81□□□□□ -0.52
CHMP4A-207ENST00000533523 NDUFB8O95169 186 aa11.81□□□□□ -0.52
CHMP4A-207ENST00000533523 OR13C7P0DN81 318 aa11.81□□□□□ -0.52
CHMP4A-207ENST00000533523 FOLR2P14207 255 aa11.81□□□□□ -0.52
CHMP4A-207ENST00000533523 PAX9P55771 341 aa11.81□□□□□ -0.52
CHMP4A-207ENST00000533523 PMS2P11Q13670 270 aa11.81□□□□□ -0.52
CHMP4A-207ENST00000533523 DEFB114Q30KQ6 69 aa11.81□□□□□ -0.52
CHMP4A-207ENST00000533523 C19orf35Q6ZS72 473 aa11.81□□□□□ -0.52
CHMP4A-207ENST00000533523 OR1L6Q8NGR2 347 aa11.81□□□□□ -0.52
CHMP4A-207ENST00000533523 CACNG8Q8WXS5 425 aa11.81□□□□□ -0.52
CHMP4A-207ENST00000533523 SMIM8Q96KF7 97 aa11.81□□□□□ -0.52
CHMP4A-207ENST00000533523 ZC4H2Q9NQZ6 224 aa11.81□□□□□ -0.52
CHMP4A-207ENST00000533523 PSENENQ9NZ42 101 aa11.81□□□□□ -0.52
CHMP4A-207ENST00000533523 TRBV7-1A0A0A6YYK4 115 aa11.8□□□□□ -0.52
CHMP4A-207ENST00000533523 LY6G6CO95867 125 aa11.8□□□□□ -0.52
CHMP4A-207ENST00000533523 TAS2R30P59541 319 aa11.8□□□□□ -0.52
CHMP4A-207ENST00000533523 SLC16A13Q7RTY0 426 aa11.8□□□□□ -0.52
CHMP4A-207ENST00000533523 NOXA1Q86UR1 476 aa11.8□□□□□ -0.52
CHMP4A-207ENST00000533523 TECRQ9NZ01 308 aaKnown RBP11.8□□□□□ -0.52
CHMP4A-207ENST00000533523 CXorf65A6NEN9 183 aa11.79□□□□□ -0.52
CHMP4A-207ENST00000533523 INS-IGF2F8WCM5 200 aa11.79□□□□□ -0.52
CHMP4A-207ENST00000533523 H3BP45 60 aa11.79□□□□□ -0.52
CHMP4A-207ENST00000533523 TSC22D2O75157 780 aa11.79□□□□□ -0.52
CHMP4A-207ENST00000533523 IGHV3-23P01764 117 aa11.79□□□□□ -0.52
CHMP4A-207ENST00000533523 ARL3P36405 182 aa11.79□□□□□ -0.52
CHMP4A-207ENST00000533523 P2RY1P47900 373 aa11.79□□□□□ -0.52
CHMP4A-207ENST00000533523 ERHP84090 104 aaKnown RBP11.79□□□□□ -0.52
CHMP4A-207ENST00000533523 WT1-ASQ06250 92 aa11.79□□□□□ -0.52
CHMP4A-207ENST00000533523 SPANXN5Q5MJ07 72 aa11.79□□□□□ -0.52
CHMP4A-207ENST00000533523 ZNF546Q86UE3 836 aa11.79□□□□□ -0.52
CHMP4A-207ENST00000533523 OR2C3Q8N628 320 aa11.79□□□□□ -0.52
CHMP4A-207ENST00000533523 VN1R17PQ8TDU5 208 aa11.79□□□□□ -0.52
CHMP4A-207ENST00000533523 HYLS1Q96M11 299 aa11.79□□□□□ -0.52
CHMP4A-207ENST00000533523 F11RQ9Y624 299 aaKnown RBP11.79□□□□□ -0.52
CHMP4A-207ENST00000533523 DNAH17Q9UFH2 4485 aa11.79□□□□□ -0.52
CHMP4A-207ENST00000533523 FAM24AA6NFZ4 105 aa11.78□□□□□ -0.52
CHMP4A-207ENST00000533523 OR2C1O95371 312 aa11.78□□□□□ -0.52
CHMP4A-207ENST00000533523 HNRNPCP07910 306 aaKnown RBP eCLIP11.78□□□□□ -0.52
CHMP4A-207ENST00000533523 CAV2P51636 162 aa11.78□□□□□ -0.52
CHMP4A-207ENST00000533523 SLC25A24Q6NUK1 477 aa11.78□□□□□ -0.52
CHMP4A-207ENST00000533523 CLEC19AQ6UXS0 136 aa11.78□□□□□ -0.52
CHMP4A-207ENST00000533523 TMEM61Q8N0U2 210 aa11.78□□□□□ -0.52
CHMP4A-207ENST00000533523 PPP1R14BQ96C90 147 aa11.78□□□□□ -0.52
CHMP4A-207ENST00000533523 CCDC140Q96MF4 163 aa11.78□□□□□ -0.52
CHMP4A-207ENST00000533523 GGTLC1Q9BX51 225 aa11.78□□□□□ -0.52
CHMP4A-207ENST00000533523 LYRM2Q9NU23 88 aaPredicted RBP11.78□□□□□ -0.52
CHMP4A-207ENST00000533523 TNFSF18Q9UNG2 199 aa11.78□□□□□ -0.52
CHMP4A-207ENST00000533523 STRAPQ9Y3F4 350 aaKnown RBP11.78□□□□□ -0.52
CHMP4A-207ENST00000533523 IGSF23A1L1A6 192 aa11.77□□□□□ -0.53
CHMP4A-207ENST00000533523 MFSD2BA6NFX1 497 aa11.77□□□□□ -0.53
CHMP4A-207ENST00000533523 C15orf62A8K5M9 175 aa11.77□□□□□ -0.53
CHMP4A-207ENST00000533523 HMSDA8MTL9 139 aa11.77□□□□□ -0.53
CHMP4A-207ENST00000533523 ARPC5O15511 151 aa11.77□□□□□ -0.53
CHMP4A-207ENST00000533523 IFNA10P01566 189 aa11.77□□□□□ -0.53
CHMP4A-207ENST00000533523 NPY1RP25929 384 aa11.77□□□□□ -0.53
CHMP4A-207ENST00000533523 NUP62P37198 522 aaPredicted RBP11.77□□□□□ -0.53
CHMP4A-207ENST00000533523 HTR2BP41595 481 aa11.77□□□□□ -0.53
CHMP4A-207ENST00000533523 NKX2-5P52952 324 aaPredicted RBP11.77□□□□□ -0.53
CHMP4A-207ENST00000533523 FAM106AQ4KMX7 169 aa11.77□□□□□ -0.53
CHMP4A-207ENST00000533523 GPHB5Q86YW7 130 aa11.77□□□□□ -0.53
CHMP4A-207ENST00000533523 INO80EQ8NBZ0 244 aaPredicted RBP11.77□□□□□ -0.53
CHMP4A-207ENST00000533523 SLC24A4Q8NFF2 622 aa11.77□□□□□ -0.53
CHMP4A-207ENST00000533523 ZNF502Q8TBZ5 544 aa11.77□□□□□ -0.53
CHMP4A-207ENST00000533523 PAIP2BQ9ULR5 123 aaKnown RBP11.77□□□□□ -0.53
CHMP4A-207ENST00000533523 S4R3C0 116 aa11.77□□□□□ -0.53
CHMP4A-207ENST00000533523 U3KQ87 197 aa11.77□□□□□ -0.53
CHMP4A-207ENST00000533523 ZNF320A2RRD8 509 aa11.76□□□□□ -0.53
CHMP4A-207ENST00000533523 LGALS9O00182 355 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms