RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 ANXA3P12429 323 aa11.38□□□□□ -0.59
CPSF1-211ENST00000533492 CRYBB3P26998 211 aa11.38□□□□□ -0.59
CPSF1-211ENST00000533492 FAUP35544 74 aaKnown RBP11.38□□□□□ -0.59
CPSF1-211ENST00000533492 RND2P52198 227 aa11.38□□□□□ -0.59
CPSF1-211ENST00000533492 DEFB131AP59861 70 aa11.38□□□□□ -0.59
CPSF1-211ENST00000533492 OR1S2Q8NGQ3 325 aa11.38□□□□□ -0.59
CPSF1-211ENST00000533492 GRAMD2BQ96HH9 432 aa11.38□□□□□ -0.59
CPSF1-211ENST00000533492 PRR13Q9NZ81 148 aa11.38□□□□□ -0.59
CPSF1-211ENST00000533492 SACSQ9NZJ4 4579 aa11.38□□□□□ -0.59
CPSF1-211ENST00000533492 CCDC160A6NGH7 325 aa11.37□□□□□ -0.59
CPSF1-211ENST00000533492 IFNA10P01566 189 aa11.37□□□□□ -0.59
CPSF1-211ENST00000533492 NPY1RP25929 384 aa11.37□□□□□ -0.59
CPSF1-211ENST00000533492 OR10J1P30954 320 aa11.37□□□□□ -0.59
CPSF1-211ENST00000533492 P2RY1P47900 373 aa11.37□□□□□ -0.59
CPSF1-211ENST00000533492 CCR6P51684 374 aa11.37□□□□□ -0.59
CPSF1-211ENST00000533492 PYDC2Q56P42 97 aa11.37□□□□□ -0.59
CPSF1-211ENST00000533492 LEMD1Q68G75 181 aa11.37□□□□□ -0.59
CPSF1-211ENST00000533492 PRSS54Q6PEW0 395 aa11.37□□□□□ -0.59
CPSF1-211ENST00000533492 LGI3Q8N145 548 aa11.37□□□□□ -0.59
CPSF1-211ENST00000533492 STXBP6Q8NFX7 210 aa11.37□□□□□ -0.59
CPSF1-211ENST00000533492 RARRES2Q99969 163 aa11.37□□□□□ -0.59
CPSF1-211ENST00000533492 RYR2Q92736 4967 aa11.36□□□□□ -0.59
CPSF1-211ENST00000533492 A0A0B4J2A0 478 aa11.36□□□□□ -0.59
CPSF1-211ENST00000533492 PIGBOS1A0A0B4J2F0 54 aa11.36□□□□□ -0.59
CPSF1-211ENST00000533492 NUPR2A6NF83 97 aa11.36□□□□□ -0.59
CPSF1-211ENST00000533492 IGLC1P0CG04 106 aa11.36□□□□□ -0.59
CPSF1-211ENST00000533492 EIF2B2P49770 351 aaKnown RBP11.36□□□□□ -0.59
CPSF1-211ENST00000533492 AP3S2P59780 193 aa11.36□□□□□ -0.59
CPSF1-211ENST00000533492 SRPXP78539 464 aa11.36□□□□□ -0.59
CPSF1-211ENST00000533492 EWSR1Q01844 656 aaKnown RBP eCLIP11.36□□□□□ -0.59
CPSF1-211ENST00000533492 SMCO1Q147U7 214 aa11.36□□□□□ -0.59
CPSF1-211ENST00000533492 RBMS2Q15434 407 aaKnown RBP11.36□□□□□ -0.59
CPSF1-211ENST00000533492 LYZL2Q7Z4W2 148 aa11.36□□□□□ -0.59
CPSF1-211ENST00000533492 STHQ8IWL8 128 aa11.36□□□□□ -0.59
CPSF1-211ENST00000533492 TOMM5Q8N4H5 51 aa11.36□□□□□ -0.59
CPSF1-211ENST00000533492 GATAD1Q8WUU5 269 aa11.36□□□□□ -0.59
CPSF1-211ENST00000533492 SHPKQ9UHJ6 478 aa11.36□□□□□ -0.59
CPSF1-211ENST00000533492 U3KQ87 197 aa11.36□□□□□ -0.59
CPSF1-211ENST00000533492 ATF4P18848 351 aaPredicted RBP11.35□□□□□ -0.59
CPSF1-211ENST00000533492 S100A5P33763 92 aa11.35□□□□□ -0.59
CPSF1-211ENST00000533492 YPEL3P61236 119 aaPredicted RBP11.35□□□□□ -0.59
CPSF1-211ENST00000533492 SUPT4H1P63272 117 aaKnown RBP11.35□□□□□ -0.59
CPSF1-211ENST00000533492 NMSQ5H8A3 153 aa11.35□□□□□ -0.59
CPSF1-211ENST00000533492 TMED4Q7Z7H5 227 aa11.35□□□□□ -0.59
CPSF1-211ENST00000533492 FAM24BQ8N5W8 94 aa11.35□□□□□ -0.59
CPSF1-211ENST00000533492 DTD1Q8TEA8 209 aa11.35□□□□□ -0.59
CPSF1-211ENST00000533492 NPIPB3Q92617 1050 aa11.35□□□□□ -0.59
CPSF1-211ENST00000533492 ACY3Q96HD9 319 aa11.35□□□□□ -0.59
CPSF1-211ENST00000533492 K7EQG2 157 aa11.34□□□□□ -0.59
CPSF1-211ENST00000533492 CA1P00915 261 aaPredicted RBP11.34□□□□□ -0.59
CPSF1-211ENST00000533492 HNRNPCP07910 306 aaKnown RBP eCLIP11.34□□□□□ -0.59
CPSF1-211ENST00000533492 AP2S1P53680 142 aaPredicted RBP11.34□□□□□ -0.59
CPSF1-211ENST00000533492 CEMP1Q6PRD7 247 aaPredicted RBP11.34□□□□□ -0.59
CPSF1-211ENST00000533492 OR11H2Q8NH07 326 aa11.34□□□□□ -0.59
CPSF1-211ENST00000533492 OR1S1Q8NH92 325 aa11.34□□□□□ -0.59
CPSF1-211ENST00000533492 TMEM170AQ8WVE7 144 aa11.34□□□□□ -0.59
CPSF1-211ENST00000533492 RBKSQ9H477 322 aa11.34□□□□□ -0.59
CPSF1-211ENST00000533492 HSPB7Q9UBY9 170 aa11.34□□□□□ -0.59
CPSF1-211ENST00000533492 KLK5Q9Y337 293 aaPredicted RBP11.34□□□□□ -0.59
CPSF1-211ENST00000533492 HELTA6NFD8 242 aa11.33□□□□□ -0.6
CPSF1-211ENST00000533492 IFNA4P05014 189 aa11.33□□□□□ -0.6
CPSF1-211ENST00000533492 IL4P05112 153 aa11.33□□□□□ -0.6
CPSF1-211ENST00000533492 RD3LP0DJH9 198 aa11.33□□□□□ -0.6
CPSF1-211ENST00000533492 KLF9Q13886 244 aaPredicted RBP11.33□□□□□ -0.6
CPSF1-211ENST00000533492 TMEM128Q5BJH2 165 aa11.33□□□□□ -0.6
CPSF1-211ENST00000533492 U3KQE9 123 aa11.33□□□□□ -0.6
CPSF1-211ENST00000533492 ZNF688P0C7X2 276 aa11.32□□□□□ -0.6
CPSF1-211ENST00000533492 ATP5IP56385 69 aaPredicted RBP11.32□□□□□ -0.6
CPSF1-211ENST00000533492 DHRS2Q13268 280 aa11.32□□□□□ -0.6
CPSF1-211ENST00000533492 C16orf54Q6UWD8 224 aa11.32□□□□□ -0.6
CPSF1-211ENST00000533492 DUXBA0A1W2PPF3 345 aa11.31□□□□□ -0.6
CPSF1-211ENST00000533492 LY6G6CO95867 125 aa11.31□□□□□ -0.6
CPSF1-211ENST00000533492 TOMM40O96008 361 aa11.31□□□□□ -0.6
CPSF1-211ENST00000533492 VAMP1P23763 118 aa11.31□□□□□ -0.6
CPSF1-211ENST00000533492 USF2Q15853 346 aaPredicted RBP11.31□□□□□ -0.6
CPSF1-211ENST00000533492 TRIM63Q969Q1 353 aa11.31□□□□□ -0.6
CPSF1-211ENST00000533492 SLC25A21Q9BQT8 299 aaPredicted RBP11.31□□□□□ -0.6
CPSF1-211ENST00000533492 PSG1P11464 419 aa11.3□□□□□ -0.6
CPSF1-211ENST00000533492 GPX4P36969 197 aaPredicted RBP11.3□□□□□ -0.6
CPSF1-211ENST00000533492 C11orf45Q8TAV5 145 aa11.3□□□□□ -0.6
CPSF1-211ENST00000533492 DCANP1Q8TF63 244 aa11.3□□□□□ -0.6
CPSF1-211ENST00000533492 PHLDA1Q8WV24 401 aaPredicted RBP11.3□□□□□ -0.6
CPSF1-211ENST00000533492 GLMPQ8WWB7 406 aa11.3□□□□□ -0.6
CPSF1-211ENST00000533492 DEDD2Q8WXF8 326 aa11.3□□□□□ -0.6
CPSF1-211ENST00000533492 LINC00476Q8WZB0 136 aa11.3□□□□□ -0.6
CPSF1-211ENST00000533492 SLC35E1Q96K37 410 aa11.3□□□□□ -0.6
CPSF1-211ENST00000533492 MFFQ9GZY8 342 aa11.3□□□□□ -0.6
CPSF1-211ENST00000533492 PFDN2Q9UHV9 154 aa11.3□□□□□ -0.6
CPSF1-211ENST00000533492 V9GYH0 126 aa11.3□□□□□ -0.6
CPSF1-211ENST00000533492 AGRNO00468 2067 aa11.3□□□□□ -0.6
CPSF1-211ENST00000533492 ZFP92A6NM28 416 aa11.29□□□□□ -0.6
CPSF1-211ENST00000533492 KNCNA6PVL3 124 aa11.29□□□□□ -0.6
CPSF1-211ENST00000533492 SPP1P10451 314 aa11.29□□□□□ -0.6
CPSF1-211ENST00000533492 RAB11AP62491 216 aa11.29□□□□□ -0.6
CPSF1-211ENST00000533492 ZNF79Q15937 498 aa11.29□□□□□ -0.6
CPSF1-211ENST00000533492 TMEM41BQ5BJD5 291 aa11.29□□□□□ -0.6
CPSF1-211ENST00000533492 ACTL10Q5JWF8 245 aa11.29□□□□□ -0.6
CPSF1-211ENST00000533492 MORN3Q6PF18 240 aaPredicted RBP11.29□□□□□ -0.6
CPSF1-211ENST00000533492 TRPT1Q86TN4 253 aaKnown RBP11.29□□□□□ -0.6
CPSF1-211ENST00000533492 OR51G1Q8NGK1 321 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms