RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 PDPNQ86YL7 162 aa13.42□□□□□ -0.26
CTSB-228ENST00000533455 NPIPB3Q92617 1050 aa13.42□□□□□ -0.26
CTSB-228ENST00000533455 FLYWCH2Q96CP2 140 aaKnown RBP13.42□□□□□ -0.26
CTSB-228ENST00000533455 TNFRSF19Q9NS68 423 aa13.42□□□□□ -0.26
CTSB-228ENST00000533455 SUB1P53999 127 aaKnown RBP eCLIP13.41□□□□□ -0.266e-10■■■■□ 19.5
CTSB-228ENST00000533455 ASPHD1Q5U4P2 390 aa13.41□□□□□ -0.26
CTSB-228ENST00000533455 TRAV9-2A0A087WT02 112 aa13.4□□□□□ -0.26
CTSB-228ENST00000533455 SIAH2O43255 324 aa13.4□□□□□ -0.26
CTSB-228ENST00000533455 TSPOP30536 169 aa13.4□□□□□ -0.26
CTSB-228ENST00000533455 ZNF841Q6ZN19 808 aa13.4□□□□□ -0.26
CTSB-228ENST00000533455 STXBP6Q8NFX7 210 aa13.4□□□□□ -0.26
CTSB-228ENST00000533455 OR4C13Q8NGP0 309 aa13.4□□□□□ -0.26
CTSB-228ENST00000533455 DCAF16Q9NXF7 216 aa13.4□□□□□ -0.26
CTSB-228ENST00000533455 KLF12Q9Y4X4 402 aa13.4□□□□□ -0.26
CTSB-228ENST00000533455 FAM215AQ9Y5M1 114 aa13.4□□□□□ -0.26
CTSB-228ENST00000533455 HIGD1CA8MV81 97 aa13.4□□□□□ -0.26
CTSB-228ENST00000533455 M0R2Z0 102 aa13.4□□□□□ -0.26
CTSB-228ENST00000533455 LCN12Q6JVE5 192 aa13.4□□□□□ -0.26
CTSB-228ENST00000533455 EBLN2Q6P2I7 272 aa13.4□□□□□ -0.26
CTSB-228ENST00000533455 EPDR1Q9UM22 224 aa13.4□□□□□ -0.26
CTSB-228ENST00000533455 IGHV2-26A0A0B4J1V2 119 aa13.39□□□□□ -0.27
CTSB-228ENST00000533455 C2orf70A6NJV1 201 aa13.39□□□□□ -0.27
CTSB-228ENST00000533455 IGLV2-23P01705 113 aa13.39□□□□□ -0.27
CTSB-228ENST00000533455 CA7P43166 264 aa13.39□□□□□ -0.27
CTSB-228ENST00000533455 UBE2G1P62253 170 aa13.39□□□□□ -0.27
CTSB-228ENST00000533455 FAM162BQ5T6X4 162 aa13.39□□□□□ -0.27
CTSB-228ENST00000533455 ZNF596Q8TC21 504 aa13.39□□□□□ -0.27
CTSB-228ENST00000533455 ORAOV1Q8WV07 137 aa13.39□□□□□ -0.27
CTSB-228ENST00000533455 ASCL3Q9NQ33 180 aa13.39□□□□□ -0.27
CTSB-228ENST00000533455 VWC2LB2RUY7 222 aa13.39□□□□□ -0.27
CTSB-228ENST00000533455 CORTO00230 105 aa13.39□□□□□ -0.27
CTSB-228ENST00000533455 CEACAM4O75871 244 aa13.39□□□□□ -0.27
CTSB-228ENST00000533455 GNG5P63218 68 aa13.39□□□□□ -0.27
CTSB-228ENST00000533455 DMRTA1Q5VZB9 504 aa13.39□□□□□ -0.27
CTSB-228ENST00000533455 LINC00305Q7Z4B0 112 aa13.39□□□□□ -0.27
CTSB-228ENST00000533455 ZCCHC24Q8N2G6 241 aaKnown RBP13.39□□□□□ -0.27
CTSB-228ENST00000533455 LINC00311Q8N616 119 aa13.39□□□□□ -0.27
CTSB-228ENST00000533455 C8orf31Q8N9H6 132 aa13.39□□□□□ -0.27
CTSB-228ENST00000533455 PERPQ96FX8 193 aa13.39□□□□□ -0.27
CTSB-228ENST00000533455 MRPL36Q9P0J6 103 aaKnown RBP13.39□□□□□ -0.27
CTSB-228ENST00000533455 PPIAL4AQ9Y536 164 aa13.39□□□□□ -0.27
CTSB-228ENST00000533455 CCL3L1P16619 93 aa13.38□□□□□ -0.27
CTSB-228ENST00000533455 MAJINQ3KP22 176 aa13.38□□□□□ -0.27
CTSB-228ENST00000533455 CT83Q5H943 113 aa13.38□□□□□ -0.27
CTSB-228ENST00000533455 C10orf55Q5SWW7 151 aa13.38□□□□□ -0.27
CTSB-228ENST00000533455 C1orf185Q5T7R7 199 aa13.38□□□□□ -0.27
CTSB-228ENST00000533455 PVRIGQ6DKI7 326 aa13.38□□□□□ -0.27
CTSB-228ENST00000533455 PRR27Q6MZM9 219 aa13.38□□□□□ -0.27
CTSB-228ENST00000533455 RNASEKQ6P5S7 137 aaKnown RBP13.38□□□□□ -0.27
CTSB-228ENST00000533455 ATOH7Q8N100 152 aa13.38□□□□□ -0.27
CTSB-228ENST00000533455 RBMXL3Q8N7X1 1067 aaKnown RBP13.38□□□□□ -0.27
CTSB-228ENST00000533455 NUP37Q8NFH4 326 aa13.38□□□□□ -0.27
CTSB-228ENST00000533455 MLST8Q9BVC4 326 aa13.38□□□□□ -0.27
CTSB-228ENST00000533455 CRYGCP07315 174 aa13.37□□□□□ -0.27
CTSB-228ENST00000533455 CD40P25942 277 aa13.37□□□□□ -0.27
CTSB-228ENST00000533455 RPRMLQ8N4K4 120 aa13.37□□□□□ -0.27
CTSB-228ENST00000533455 TMEM186Q96B77 213 aa13.37□□□□□ -0.27
CTSB-228ENST00000533455 GPR82Q96P67 336 aa13.37□□□□□ -0.27
CTSB-228ENST00000533455 SSBP4Q9BWG4 385 aaPredicted RBP13.37□□□□□ -0.27
CTSB-228ENST00000533455 RPP21Q9H633 154 aaKnown RBP13.37□□□□□ -0.27
CTSB-228ENST00000533455 C1RLQ9NZP8 487 aa13.37□□□□□ -0.27
CTSB-228ENST00000533455 ZNF492Q9P255 531 aa13.37□□□□□ -0.27
CTSB-228ENST00000533455 SSUH2Q9Y2M2 353 aa13.37□□□□□ -0.27
CTSB-228ENST00000533455 WASHC3Q9Y3C0 194 aa13.37□□□□□ -0.27
CTSB-228ENST00000533455 CBY1Q9Y3M2 126 aa13.37□□□□□ -0.27
CTSB-228ENST00000533455 SOX21Q9Y651 276 aaPredicted RBP13.37□□□□□ -0.27
CTSB-228ENST00000533455 SLC25A5P05141 298 aaKnown RBP13.37□□□□□ -0.27
CTSB-228ENST00000533455 GPR6P46095 362 aaPredicted RBP13.37□□□□□ -0.27
CTSB-228ENST00000533455 REG1BP48304 166 aa13.37□□□□□ -0.27
CTSB-228ENST00000533455 URB1-AS1Q96HZ7 61 aa13.37□□□□□ -0.27
CTSB-228ENST00000533455 PRSS22Q9GZN4 317 aa13.37□□□□□ -0.27
CTSB-228ENST00000533455 CACNA1HO95180 2353 aa13.37□□□□□ -0.27
CTSB-228ENST00000533455 FCN3O75636 299 aa13.36□□□□□ -0.27
CTSB-228ENST00000533455 TNFRSF1AP19438 455 aa13.36□□□□□ -0.27
CTSB-228ENST00000533455 CAMPP49913 170 aa13.36□□□□□ -0.27
CTSB-228ENST00000533455 HBBP68871 147 aa13.36□□□□□ -0.27
CTSB-228ENST00000533455 DEFB109BQ30KR1 87 aa13.36□□□□□ -0.27
CTSB-228ENST00000533455 TMEM200BQ69YZ2 307 aa13.36□□□□□ -0.27
CTSB-228ENST00000533455 ETFRF1Q6IPR1 90 aa13.36□□□□□ -0.27
CTSB-228ENST00000533455 OR10X1Q8NGY0 326 aa13.36□□□□□ -0.27
CTSB-228ENST00000533455 ST6GALNAC6Q969X2 333 aa13.36□□□□□ -0.27
CTSB-228ENST00000533455 A0A1W2PPI3 338 aa13.35□□□□□ -0.27
CTSB-228ENST00000533455 C22orf46C9J442 243 aa13.35□□□□□ -0.27
CTSB-228ENST00000533455 TOMM40O96008 361 aa13.35□□□□□ -0.27
CTSB-228ENST00000533455 ZNF137PP52743 207 aa13.35□□□□□ -0.27
CTSB-228ENST00000533455 Q56UQ5 140 aa13.35□□□□□ -0.27
CTSB-228ENST00000533455 FAM120AOSQ5T036 256 aa13.35□□□□□ -0.27
CTSB-228ENST00000533455 ZADH2Q8N4Q0 377 aa13.35□□□□□ -0.27
CTSB-228ENST00000533455 TRGV9Q99603 122 aa13.35□□□□□ -0.27
CTSB-228ENST00000533455 NAV3Q8IVL0 2385 aa13.35□□□□□ -0.27
CTSB-228ENST00000533455 NBEAQ8NFP9 2946 aa13.35□□□□□ -0.27
CTSB-228ENST00000533455 C19orf71A6NCJ1 209 aa13.35□□□□□ -0.27
CTSB-228ENST00000533455 PGPA6NDG6 321 aa13.35□□□□□ -0.27
CTSB-228ENST00000533455 TCF21O43680 179 aa13.35□□□□□ -0.27
CTSB-228ENST00000533455 MOSP00540 346 aa13.35□□□□□ -0.27
CTSB-228ENST00000533455 PLAUP00749 431 aa13.35□□□□□ -0.27
CTSB-228ENST00000533455 IGHV3-48P01763 117 aa13.35□□□□□ -0.27
CTSB-228ENST00000533455 IGLL1P15814 213 aa13.35□□□□□ -0.27
CTSB-228ENST00000533455 MRGPRG-AS1Q2M3A8 158 aa13.35□□□□□ -0.27
CTSB-228ENST00000533455 VMA21Q3ZAQ7 101 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms