RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 C10orf113Q5VZT2 155 aa12.28□□□□□ -0.44
CACNA1E-208ENST00000533229 PVRIGQ6DKI7 326 aa12.28□□□□□ -0.44
CACNA1E-208ENST00000533229 MISP3Q96FF7 219 aa12.28□□□□□ -0.44
CACNA1E-208ENST00000533229 BTF3L4Q96K17 158 aa12.28□□□□□ -0.44
CACNA1E-208ENST00000533229 NBASA2RRP1 2371 aa12.28□□□□□ -0.44
CACNA1E-208ENST00000533229 TSTD3H0UI37 97 aa12.28□□□□□ -0.44
CACNA1E-208ENST00000533229 NUPR1O60356 82 aa12.28□□□□□ -0.44
CACNA1E-208ENST00000533229 CBLN1P23435 193 aa12.28□□□□□ -0.44
CACNA1E-208ENST00000533229 MMD2Q8IY49 270 aa12.28□□□□□ -0.44
CACNA1E-208ENST00000533229 TMEM256Q8N2U0 113 aa12.28□□□□□ -0.44
CACNA1E-208ENST00000533229 IGF2BP2-AS1Q96M15 143 aa12.28□□□□□ -0.44
CACNA1E-208ENST00000533229 ABCA4P78363 2273 aa12.27□□□□□ -0.44
CACNA1E-208ENST00000533229 RPL27AP46776 148 aaKnown RBP12.27□□□□□ -0.45
CACNA1E-208ENST00000533229 ASPHD1Q5U4P2 390 aa12.27□□□□□ -0.45
CACNA1E-208ENST00000533229 BEND2Q8NDZ0 799 aa12.27□□□□□ -0.45
CACNA1E-208ENST00000533229 FCN1O00602 326 aa12.26□□□□□ -0.45
CACNA1E-208ENST00000533229 COMPP49747 757 aaPredicted RBP12.26□□□□□ -0.45
CACNA1E-208ENST00000533229 FXYD3Q14802 87 aa12.26□□□□□ -0.45
CACNA1E-208ENST00000533229 LINC00305Q7Z4B0 112 aa12.26□□□□□ -0.45
CACNA1E-208ENST00000533229 PPP1R27Q86WC6 154 aa12.26□□□□□ -0.45
CACNA1E-208ENST00000533229 ZNF664Q8N3J9 261 aa12.26□□□□□ -0.45
CACNA1E-208ENST00000533229 RNF2Q99496 336 aa12.26□□□□□ -0.45
CACNA1E-208ENST00000533229 PAXXQ9BUH6 204 aa12.26□□□□□ -0.45
CACNA1E-208ENST00000533229 TNFRSF19Q9NS68 423 aa12.26□□□□□ -0.45
CACNA1E-208ENST00000533229 TEX22C9J3V5 150 aa12.26□□□□□ -0.45
CACNA1E-208ENST00000533229 GCGP01275 180 aa12.26□□□□□ -0.45
CACNA1E-208ENST00000533229 OR8I2Q8N0Y5 310 aa12.26□□□□□ -0.45
CACNA1E-208ENST00000533229 NHLRC2Q8NBF2 726 aa12.26□□□□□ -0.45
CACNA1E-208ENST00000533229 ST6GALNAC3Q8NDV1 305 aa12.26□□□□□ -0.45
CACNA1E-208ENST00000533229 OR1L4Q8NGR5 311 aa12.26□□□□□ -0.45
CACNA1E-208ENST00000533229 FXYD5Q96DB9 178 aa12.26□□□□□ -0.45
CACNA1E-208ENST00000533229 FBXL15Q9H469 300 aa12.26□□□□□ -0.45
CACNA1E-208ENST00000533229 GRIFINA4D1Z8 144 aa12.25□□□□□ -0.45
CACNA1E-208ENST00000533229 LY6LH3BQJ8 138 aa12.25□□□□□ -0.45
CACNA1E-208ENST00000533229 ORM2P19652 201 aa12.25□□□□□ -0.45
CACNA1E-208ENST00000533229 SELENOTP62341 195 aa12.25□□□□□ -0.45
CACNA1E-208ENST00000533229 RPEL1Q2QD12 228 aa12.25□□□□□ -0.45
CACNA1E-208ENST00000533229 TIGITQ495A1 244 aa12.25□□□□□ -0.45
CACNA1E-208ENST00000533229 GBGT1Q8N5D6 347 aa12.25□□□□□ -0.45
CACNA1E-208ENST00000533229 IGFBPL1Q8WX77 278 aa12.25□□□□□ -0.45
CACNA1E-208ENST00000533229 GSX1Q9H4S2 264 aaPredicted RBP12.25□□□□□ -0.45
CACNA1E-208ENST00000533229 BPIFB3P59826 476 aa12.25□□□□□ -0.45
CACNA1E-208ENST00000533229 KLRB1Q12918 225 aa12.25□□□□□ -0.45
CACNA1E-208ENST00000533229 TMEM116Q8NCL8 245 aa12.25□□□□□ -0.45
CACNA1E-208ENST00000533229 C8orf46Q8TAG6 207 aa12.25□□□□□ -0.45
CACNA1E-208ENST00000533229 RPEQ96AT9 228 aa12.25□□□□□ -0.45
CACNA1E-208ENST00000533229 ONECUT1Q9UBC0 465 aa12.25□□□□□ -0.45
CACNA1E-208ENST00000533229 TP53TG3Q9ULZ0 132 aa12.25□□□□□ -0.45
CACNA1E-208ENST00000533229 ZNF705GA8MUZ8 300 aaPredicted RBP12.24□□□□□ -0.45
CACNA1E-208ENST00000533229 SPINK4O60575 86 aa12.24□□□□□ -0.45
CACNA1E-208ENST00000533229 SSX2Q16385 188 aa12.24□□□□□ -0.45
CACNA1E-208ENST00000533229 ZNF329Q86UD4 541 aa12.24□□□□□ -0.45
CACNA1E-208ENST00000533229 OR1B1Q8NGR6 318 aa12.24□□□□□ -0.45
CACNA1E-208ENST00000533229 AMMECR1Q9Y4X0 333 aaPredicted RBP12.24□□□□□ -0.45
CACNA1E-208ENST00000533229 HRNRQ86YZ3 2850 aaPredicted RBP12.24□□□□□ -0.45
CACNA1E-208ENST00000533229 TRAV9-1A0A075B6T8 112 aa12.23□□□□□ -0.45
CACNA1E-208ENST00000533229 A8MWP6 167 aa12.23□□□□□ -0.45
CACNA1E-208ENST00000533229 RBP4P02753 201 aa12.23□□□□□ -0.45
CACNA1E-208ENST00000533229 MGST1P10620 155 aaKnown RBP12.23□□□□□ -0.45
CACNA1E-208ENST00000533229 IER3P46695 156 aa12.23□□□□□ -0.45
CACNA1E-208ENST00000533229 SLC35B1P78383 322 aa12.23□□□□□ -0.45
CACNA1E-208ENST00000533229 ETFRF1Q6IPR1 90 aa12.23□□□□□ -0.45
CACNA1E-208ENST00000533229 LY6G5BQ8NDX9 201 aa12.23□□□□□ -0.45
CACNA1E-208ENST00000533229 OR8B3Q8NGG8 313 aa12.23□□□□□ -0.45
CACNA1E-208ENST00000533229 OR1L6Q8NGR2 347 aa12.23□□□□□ -0.45
CACNA1E-208ENST00000533229 OR8B2Q96RD0 313 aa12.23□□□□□ -0.45
CACNA1E-208ENST00000533229 MRPL18Q9H0U6 180 aaKnown RBP12.23□□□□□ -0.45
CACNA1E-208ENST00000533229 OSTCQ9NRP0 149 aa12.23□□□□□ -0.45
CACNA1E-208ENST00000533229 TRAV34A0A0B4J273 112 aa12.23□□□□□ -0.45
CACNA1E-208ENST00000533229 ISLRO14498 428 aa12.23□□□□□ -0.45
CACNA1E-208ENST00000533229 TMEM18Q96B42 140 aa12.23□□□□□ -0.45
CACNA1E-208ENST00000533229 CDC42EP3Q9UKI2 254 aa12.23□□□□□ -0.45
CACNA1E-208ENST00000533229 F11RQ9Y624 299 aaKnown RBP12.23□□□□□ -0.45
CACNA1E-208ENST00000533229 CA1P00915 261 aaPredicted RBP12.22□□□□□ -0.45
CACNA1E-208ENST00000533229 MYCNOSP40205 109 aa12.22□□□□□ -0.45
CACNA1E-208ENST00000533229 UCNP55089 124 aa12.22□□□□□ -0.45
CACNA1E-208ENST00000533229 TCL1AP56279 114 aa12.22□□□□□ -0.45
CACNA1E-208ENST00000533229 ARF6P62330 175 aa12.22□□□□□ -0.45
CACNA1E-208ENST00000533229 RANP62826 216 aaKnown RBP12.22□□□□□ -0.45
CACNA1E-208ENST00000533229 IBA57Q5T440 356 aaKnown RBP12.22□□□□□ -0.45
CACNA1E-208ENST00000533229 SRSF12Q8WXF0 261 aaKnown RBP12.22□□□□□ -0.45
CACNA1E-208ENST00000533229 FAM168AQ92567 244 aa12.22□□□□□ -0.45
CACNA1E-208ENST00000533229 TRGV9Q99603 122 aa12.22□□□□□ -0.45
CACNA1E-208ENST00000533229 TIMM23O14925 209 aa12.22□□□□□ -0.45
CACNA1E-208ENST00000533229 LIPFP07098 398 aa12.22□□□□□ -0.45
CACNA1E-208ENST00000533229 LINC00310P59036 64 aa12.22□□□□□ -0.45
CACNA1E-208ENST00000533229 GNG5P63218 68 aa12.22□□□□□ -0.45
CACNA1E-208ENST00000533229 SNURFLB1AK76 121 aa12.21□□□□□ -0.45
CACNA1E-208ENST00000533229 TAS2R60P59551 318 aa12.21□□□□□ -0.45
CACNA1E-208ENST00000533229 CX3CL1P78423 397 aa12.21□□□□□ -0.45
CACNA1E-208ENST00000533229 NHLH1Q02575 133 aa12.21□□□□□ -0.45
CACNA1E-208ENST00000533229 FBLN7Q53RD9 439 aa12.21□□□□□ -0.45
CACNA1E-208ENST00000533229 LEMD1Q68G75 181 aa12.21□□□□□ -0.45
CACNA1E-208ENST00000533229 MRPL41Q8IXM3 137 aaKnown RBP12.21□□□□□ -0.45
CACNA1E-208ENST00000533229 BLNKQ8WV28 456 aa12.21□□□□□ -0.45
CACNA1E-208ENST00000533229 PEX7O00628 323 aa12.2□□□□□ -0.46
CACNA1E-208ENST00000533229 CD24P25063 80 aa12.2□□□□□ -0.46
CACNA1E-208ENST00000533229 C11orf71Q6IPW1 123 aa12.2□□□□□ -0.46
CACNA1E-208ENST00000533229 RAB1BQ9H0U4 201 aa12.2□□□□□ -0.46
CACNA1E-208ENST00000533229 HILPDAQ9Y5L2 63 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms