RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 PRSS54Q6PEW0 395 aa12.78□□□□□ -0.36
PHRF1-204ENST00000532550 APRG1Q8IVJ8 170 aa12.78□□□□□ -0.36
PHRF1-204ENST00000532550 LILRB2Q8N423 598 aa12.78□□□□□ -0.36
PHRF1-204ENST00000532550 OR1S2Q8NGQ3 325 aa12.78□□□□□ -0.36
PHRF1-204ENST00000532550 DTD1Q8TEA8 209 aa12.78□□□□□ -0.36
PHRF1-204ENST00000532550 Q8WTZ3 238 aa12.78□□□□□ -0.36
PHRF1-204ENST00000532550 NARS2Q96I59 477 aaKnown RBP12.78□□□□□ -0.36
PHRF1-204ENST00000532550 RBKSQ9H477 322 aa12.78□□□□□ -0.36
PHRF1-204ENST00000532550 HSPB7Q9UBY9 170 aa12.78□□□□□ -0.36
PHRF1-204ENST00000532550 KIR2DL5BA0A0G2JN68 375 aa12.77□□□□□ -0.37
PHRF1-204ENST00000532550 KIR2DL5BA0A0G2JPC4 375 aa12.77□□□□□ -0.37
PHRF1-204ENST00000532550 DUXBA0A1W2PPF3 345 aa12.77□□□□□ -0.37
PHRF1-204ENST00000532550 IGKV1-17P01599 117 aa12.77□□□□□ -0.37
PHRF1-204ENST00000532550 RPL35AP18077 110 aaKnown RBP12.77□□□□□ -0.37
PHRF1-204ENST00000532550 VAMP1P23763 118 aa12.77□□□□□ -0.37
PHRF1-204ENST00000532550 RND2P52198 227 aa12.77□□□□□ -0.37
PHRF1-204ENST00000532550 Q6ZWC4 215 aa12.77□□□□□ -0.37
PHRF1-204ENST00000532550 KIR2DL5AQ8N109 375 aa12.77□□□□□ -0.37
PHRF1-204ENST00000532550 KIR2DL5BQ8NHK3 375 aa12.77□□□□□ -0.37
PHRF1-204ENST00000532550 SPRY2O43597 315 aa12.76□□□□□ -0.37
PHRF1-204ENST00000532550 IGLC1P0CG04 106 aa12.76□□□□□ -0.37
PHRF1-204ENST00000532550 OR10J1P30954 320 aa12.76□□□□□ -0.37
PHRF1-204ENST00000532550 ATP5IP56385 69 aaPredicted RBP12.76□□□□□ -0.37
PHRF1-204ENST00000532550 TMEM170AQ8WVE7 144 aa12.76□□□□□ -0.37
PHRF1-204ENST00000532550 MS4A6AQ9H2W1 248 aa12.76□□□□□ -0.37
PHRF1-204ENST00000532550 IFNA4P05014 189 aa12.75□□□□□ -0.37
PHRF1-204ENST00000532550 CRYBB3P26998 211 aa12.75□□□□□ -0.37
PHRF1-204ENST00000532550 YPEL3P61236 119 aaPredicted RBP12.75□□□□□ -0.37
PHRF1-204ENST00000532550 TRIQKQ629K1 86 aa12.75□□□□□ -0.37
PHRF1-204ENST00000532550 NPIPB3Q92617 1050 aa12.75□□□□□ -0.37
PHRF1-204ENST00000532550 ACY3Q96HD9 319 aa12.75□□□□□ -0.37
PHRF1-204ENST00000532550 GRAMD2BQ96HH9 432 aa12.75□□□□□ -0.37
PHRF1-204ENST00000532550 SRRQ9GZT4 340 aa12.75□□□□□ -0.37
PHRF1-204ENST00000532550 MAP6D1Q9H9H5 199 aa12.75□□□□□ -0.37
PHRF1-204ENST00000532550 TP53TG1Q9Y2A0 90 aa12.75□□□□□ -0.37
PHRF1-204ENST00000532550 TRAV2A0A0B4J234 112 aa12.74□□□□□ -0.37
PHRF1-204ENST00000532550 SFT2D2O95562 160 aa12.74□□□□□ -0.37
PHRF1-204ENST00000532550 RBMS2Q15434 407 aaKnown RBP12.74□□□□□ -0.37
PHRF1-204ENST00000532550 ZNF124Q15973 351 aa12.74□□□□□ -0.37
PHRF1-204ENST00000532550 DEFB135Q30KP9 77 aa12.74□□□□□ -0.37
PHRF1-204ENST00000532550 CENPSQ8N2Z9 138 aa12.74□□□□□ -0.37
PHRF1-204ENST00000532550 LRTM2Q8N967 370 aa12.74□□□□□ -0.37
PHRF1-204ENST00000532550 RABAC1Q9UI14 185 aa12.74□□□□□ -0.37
PHRF1-204ENST00000532550 TMED3Q9Y3Q3 217 aa12.74□□□□□ -0.37
PHRF1-204ENST00000532550 CSMD3Q7Z407 3707 aa12.74□□□□□ -0.37
PHRF1-204ENST00000532550 RYR3Q15413 4870 aa12.73□□□□□ -0.37
PHRF1-204ENST00000532550 TENM2Q9NT68 2774 aa12.73□□□□□ -0.37
PHRF1-204ENST00000532550 NAP1L6A6NFF2 107 aa12.73□□□□□ -0.37
PHRF1-204ENST00000532550 SLC25A6P12236 298 aa12.73□□□□□ -0.37
PHRF1-204ENST00000532550 P2RY1P47900 373 aa12.73□□□□□ -0.37
PHRF1-204ENST00000532550 PPP1R1AQ13522 171 aa12.73□□□□□ -0.37
PHRF1-204ENST00000532550 BAK1Q16611 211 aa12.73□□□□□ -0.37
PHRF1-204ENST00000532550 RNF183Q96D59 192 aa12.73□□□□□ -0.37
PHRF1-204ENST00000532550 CSTL1Q9H114 145 aa12.73□□□□□ -0.37
PHRF1-204ENST00000532550 PITX3O75364 302 aa12.72□□□□□ -0.37
PHRF1-204ENST00000532550 MED6O75586 246 aa12.72□□□□□ -0.37
PHRF1-204ENST00000532550 HNRNPCP07910 306 aaKnown RBP eCLIP12.72□□□□□ -0.37
PHRF1-204ENST00000532550 RD3LP0DJH9 198 aa12.72□□□□□ -0.37
PHRF1-204ENST00000532550 GPX4P36969 197 aaPredicted RBP12.72□□□□□ -0.37
PHRF1-204ENST00000532550 EIF2B2P49770 351 aaKnown RBP12.72□□□□□ -0.37
PHRF1-204ENST00000532550 STXBP6Q8NFX7 210 aa12.72□□□□□ -0.37
PHRF1-204ENST00000532550 HELTA6NFD8 242 aa12.71□□□□□ -0.37
PHRF1-204ENST00000532550 CENPXA8MT69 81 aa12.71□□□□□ -0.37
PHRF1-204ENST00000532550 MPTX1A8MV57 137 aa12.71□□□□□ -0.37
PHRF1-204ENST00000532550 FAM90A26D6RGX4 464 aa12.71□□□□□ -0.37
PHRF1-204ENST00000532550 IL4P05112 153 aa12.71□□□□□ -0.37
PHRF1-204ENST00000532550 HOXB5P09067 269 aa12.71□□□□□ -0.37
PHRF1-204ENST00000532550 AP2S1P53680 142 aaPredicted RBP12.71□□□□□ -0.37
PHRF1-204ENST00000532550 DEFB131AP59861 70 aa12.71□□□□□ -0.37
PHRF1-204ENST00000532550 UBE2MP61081 183 aaKnown RBP12.71□□□□□ -0.37
PHRF1-204ENST00000532550 RAB11AP62491 216 aa12.71□□□□□ -0.37
PHRF1-204ENST00000532550 NDUFA13Q9P0J0 144 aa12.71□□□□□ -0.37
PHRF1-204ENST00000532550 U3KQE9 123 aa12.71□□□□□ -0.37
PHRF1-204ENST00000532550 LINC00854A0A1B0GVQ3 168 aa12.7□□□□□ -0.38
PHRF1-204ENST00000532550 TOMM40O96008 361 aa12.7□□□□□ -0.38
PHRF1-204ENST00000532550 IAPPP10997 89 aa12.7□□□□□ -0.38
PHRF1-204ENST00000532550 RPP30P78346 268 aaKnown RBP12.7□□□□□ -0.38
PHRF1-204ENST00000532550 LEMD1Q68G75 181 aa12.7□□□□□ -0.38
PHRF1-204ENST00000532550 SLC35E1Q96K37 410 aa12.7□□□□□ -0.38
PHRF1-204ENST00000532550 CIB3Q96Q77 187 aaPredicted RBP12.7□□□□□ -0.38
PHRF1-204ENST00000532550 PAIP2BQ9ULR5 123 aaKnown RBP12.7□□□□□ -0.38
PHRF1-204ENST00000532550 DYNC2H1Q8NCM8 4307 aaKnown RBP12.69□□□□□ -0.38
PHRF1-204ENST00000532550 STARD9Q9P2P6 4700 aa12.69□□□□□ -0.38
PHRF1-204ENST00000532550 A0A0J9YWU9 116 aa12.69□□□□□ -0.38
PHRF1-204ENST00000532550 LCE6AA0A183 80 aa12.69□□□□□ -0.38
PHRF1-204ENST00000532550 ZFP92A6NM28 416 aa12.69□□□□□ -0.38
PHRF1-204ENST00000532550 K7EQG2 157 aa12.69□□□□□ -0.38
PHRF1-204ENST00000532550 NDUFB6O95139 128 aa12.69□□□□□ -0.38
PHRF1-204ENST00000532550 PSG1P11464 419 aa12.69□□□□□ -0.38
PHRF1-204ENST00000532550 GAMTQ14353 236 aa12.69□□□□□ -0.38
PHRF1-204ENST00000532550 USF2Q15853 346 aaPredicted RBP12.69□□□□□ -0.38
PHRF1-204ENST00000532550 GGNBP1Q5YKI7 109 aa12.69□□□□□ -0.38
PHRF1-204ENST00000532550 C16orf54Q6UWD8 224 aa12.69□□□□□ -0.38
PHRF1-204ENST00000532550 LYG2Q86SG7 212 aa12.69□□□□□ -0.38
PHRF1-204ENST00000532550 FAM24BQ8N5W8 94 aa12.69□□□□□ -0.38
PHRF1-204ENST00000532550 OR51G1Q8NGK1 321 aa12.69□□□□□ -0.38
PHRF1-204ENST00000532550 C9orf170A2RU37 121 aa12.68□□□□□ -0.38
PHRF1-204ENST00000532550 SYNGR2O43760 224 aa12.68□□□□□ -0.38
PHRF1-204ENST00000532550 DHRS2Q13268 280 aa12.68□□□□□ -0.38
PHRF1-204ENST00000532550 STHQ8IWL8 128 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms