RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 DMRTC2Q8IXT2 367 aaPredicted RBP9.3□□□□□ -0.92
PTPRK-221ENST00000532331 TMEM101Q96IK0 257 aa9.3□□□□□ -0.92
PTPRK-221ENST00000532331 OTORQ9NRC9 128 aa9.3□□□□□ -0.92
PTPRK-221ENST00000532331 GRIFINA4D1Z8 144 aa9.3□□□□□ -0.92
PTPRK-221ENST00000532331 ATP5G3P48201 142 aa9.3□□□□□ -0.92
PTPRK-221ENST00000532331 TAS2R60P59551 318 aa9.3□□□□□ -0.92
PTPRK-221ENST00000532331 SRSF7Q16629 238 aaKnown RBP eCLIP9.3□□□□□ -0.92
PTPRK-221ENST00000532331 DEFB113Q30KQ7 82 aa9.3□□□□□ -0.92
PTPRK-221ENST00000532331 LRTM2Q8N967 370 aa9.3□□□□□ -0.92
PTPRK-221ENST00000532331 RNF166Q96A37 237 aaPredicted RBP9.3□□□□□ -0.92
PTPRK-221ENST00000532331 SLC50A1Q9BRV3 221 aa9.3□□□□□ -0.92
PTPRK-221ENST00000532331 RPP21Q9H633 154 aaKnown RBP9.3□□□□□ -0.92
PTPRK-221ENST00000532331 UQCR10Q9UDW1 63 aa9.3□□□□□ -0.92
PTPRK-221ENST00000532331 TTC28Q96AY4 2481 aa9.3□□□□□ -0.92
PTPRK-221ENST00000532331 HEATR5BQ9P2D3 2071 aa9.3□□□□□ -0.92
PTPRK-221ENST00000532331 A0A0A6YYD4 124 aa9.29□□□□□ -0.92
PTPRK-221ENST00000532331 A0A1B0GUT8 65 aa9.29□□□□□ -0.92
PTPRK-221ENST00000532331 BUB1B-PAK6H3BSN5 160 aa9.29□□□□□ -0.92
PTPRK-221ENST00000532331 SRP19P09132 144 aaKnown RBP9.29□□□□□ -0.92
PTPRK-221ENST00000532331 CBLN1P23435 193 aa9.29□□□□□ -0.92
PTPRK-221ENST00000532331 RUSC1-AS1Q66K80 236 aa9.29□□□□□ -0.92
PTPRK-221ENST00000532331 Q6AWC8 147 aa9.29□□□□□ -0.92
PTPRK-221ENST00000532331 SLC25A34Q6PIV7 304 aa9.29□□□□□ -0.92
PTPRK-221ENST00000532331 PRELID3AQ96N28 172 aa9.29□□□□□ -0.92
PTPRK-221ENST00000532331 SOX21Q9Y651 276 aaPredicted RBP9.29□□□□□ -0.92
PTPRK-221ENST00000532331 MPZP25189 248 aa9.29□□□□□ -0.92
PTPRK-221ENST00000532331 PRCDQ00LT1 54 aa9.29□□□□□ -0.92
PTPRK-221ENST00000532331 PIP4P2Q8N4L2 257 aa9.29□□□□□ -0.92
PTPRK-221ENST00000532331 SDF2L1Q9HCN8 221 aa9.29□□□□□ -0.92
PTPRK-221ENST00000532331 RNASE4P34096 147 aaKnown RBP9.29□□□□□ -0.92
PTPRK-221ENST00000532331 EFNB3Q15768 340 aa9.29□□□□□ -0.92
PTPRK-221ENST00000532331 CLDN16Q9Y5I7 305 aa9.29□□□□□ -0.92
PTPRK-221ENST00000532331 IGKV1-12A0A0C4DH73 117 aa9.29□□□□□ -0.92
PTPRK-221ENST00000532331 LOC107984156A0A0G2JMH3 177 aa9.29□□□□□ -0.92
PTPRK-221ENST00000532331 A0A1B0GW15 77 aa9.29□□□□□ -0.92
PTPRK-221ENST00000532331 IGKV1D-12P01611 117 aa9.29□□□□□ -0.92
PTPRK-221ENST00000532331 OTX1P32242 354 aaPredicted RBP9.29□□□□□ -0.92
PTPRK-221ENST00000532331 ARL17AQ8IVW1 177 aa9.29□□□□□ -0.92
PTPRK-221ENST00000532331 RNF125Q96EQ8 232 aa9.29□□□□□ -0.92
PTPRK-221ENST00000532331 IGFL2Q6UWQ7 119 aa9.29□□□□□ -0.92
PTPRK-221ENST00000532331 TMEM136Q6ZRR5 245 aa9.29□□□□□ -0.92
PTPRK-221ENST00000532331 REC114Q7Z4M0 266 aa9.29□□□□□ -0.92
PTPRK-221ENST00000532331 BIVMQ86UB2 503 aa9.29□□□□□ -0.92
PTPRK-221ENST00000532331 UBE2DNLQ8IWF7 75 aa9.29□□□□□ -0.92
PTPRK-221ENST00000532331 PNRC2Q9NPJ4 139 aaKnown RBP9.29□□□□□ -0.92
PTPRK-221ENST00000532331 GBF1Q92538 1859 aa9.28□□□□□ -0.92
PTPRK-221ENST00000532331 PSPNO60542 156 aa9.28□□□□□ -0.92
PTPRK-221ENST00000532331 SUMO2P61956 95 aaKnown RBP9.28□□□□□ -0.92
PTPRK-221ENST00000532331 LEMD1Q68G75 181 aa9.28□□□□□ -0.92
PTPRK-221ENST00000532331 ZNF256Q9Y2P7 627 aaPredicted RBP9.28□□□□□ -0.92
PTPRK-221ENST00000532331 IGHV1-69DA0A0B4J2H0 117 aa9.28□□□□□ -0.92
PTPRK-221ENST00000532331 SLC17A3O00476 420 aa9.28□□□□□ -0.92
PTPRK-221ENST00000532331 IGHV1-69P01742 117 aa9.28□□□□□ -0.92
PTPRK-221ENST00000532331 CDX1P47902 265 aaPredicted RBP9.28□□□□□ -0.92
PTPRK-221ENST00000532331 BTCP35070 178 aa9.28□□□□□ -0.92
PTPRK-221ENST00000532331 LEPP41159 167 aa9.28□□□□□ -0.92
PTPRK-221ENST00000532331 UBE2E1P51965 193 aa9.28□□□□□ -0.92
PTPRK-221ENST00000532331 FOXA3P55318 350 aaPredicted RBP9.28□□□□□ -0.92
PTPRK-221ENST00000532331 JOSD1Q15040 202 aaPredicted RBP9.28□□□□□ -0.92
PTPRK-221ENST00000532331 SLC25A48Q6ZT89 311 aaKnown RBP9.28□□□□□ -0.92
PTPRK-221ENST00000532331 HINT1P49773 126 aaPredicted RBP9.28□□□□□ -0.92
PTPRK-221ENST00000532331 ZNF329Q86UD4 541 aa9.28□□□□□ -0.92
PTPRK-221ENST00000532331 GFI1Q99684 422 aa9.28□□□□□ -0.92
PTPRK-221ENST00000532331 TECTAO75443 2155 aa9.28□□□□□ -0.92
PTPRK-221ENST00000532331 FOXL2NBQ6ZUU3 175 aa9.27□□□□□ -0.92
PTPRK-221ENST00000532331 FER1L6-AS1Q8NA97 138 aa9.27□□□□□ -0.92
PTPRK-221ENST00000532331 RNF126Q9BV68 326 aa9.27□□□□□ -0.92
PTPRK-221ENST00000532331 CARHSP1Q9Y2V2 147 aaKnown RBP9.27□□□□□ -0.92
PTPRK-221ENST00000532331 NOTCH4Q99466 2003 aa9.27□□□□□ -0.92
PTPRK-221ENST00000532331 NBASA2RRP1 2371 aa9.27□□□□□ -0.92
PTPRK-221ENST00000532331 FABP2P12104 132 aa9.27□□□□□ -0.93
PTPRK-221ENST00000532331 MRPS16Q9Y3D3 137 aaKnown RBP9.27□□□□□ -0.93
PTPRK-221ENST00000532331 IGKV1D-17A0A075B6S4 117 aa9.27□□□□□ -0.93
PTPRK-221ENST00000532331 IGHV2-70DA0A0C4DH43 119 aa9.27□□□□□ -0.93
PTPRK-221ENST00000532331 C5orf64Q2M2E5 130 aa9.27□□□□□ -0.93
PTPRK-221ENST00000532331 C15orf32Q32M92 178 aa9.27□□□□□ -0.93
PTPRK-221ENST00000532331 SNRNP200O75643 2136 aaKnown RBP9.27□□□□□ -0.93
PTPRK-221ENST00000532331 ID3Q02535 119 aa9.27□□□□□ -0.93
PTPRK-221ENST00000532331 ASCL2Q99929 193 aa9.27□□□□□ -0.93
PTPRK-221ENST00000532331 IGKV1D-8A0A087WSZ0 117 aa9.27□□□□□ -0.93
PTPRK-221ENST00000532331 CD5P06127 495 aa9.27□□□□□ -0.93
PTPRK-221ENST00000532331 PMCHL2Q9BQD1 86 aa9.27□□□□□ -0.93
PTPRK-221ENST00000532331 ALKBH7Q9BT30 221 aaPredicted RBP9.27□□□□□ -0.93
PTPRK-221ENST00000532331 TRAV9-1A0A075B6T8 112 aa9.26□□□□□ -0.93
PTPRK-221ENST00000532331 ZNF414Q96IQ9 312 aa9.26□□□□□ -0.93
PTPRK-221ENST00000532331 KCNS1Q96KK3 526 aa9.26□□□□□ -0.93
PTPRK-221ENST00000532331 FABP5P3A8MUU1 101 aa9.26□□□□□ -0.93
PTPRK-221ENST00000532331 USMG5Q96IX5 58 aa9.26□□□□□ -0.93
PTPRK-221ENST00000532331 SCN8AQ9UQD0 1980 aa9.26□□□□□ -0.93
PTPRK-221ENST00000532331 IGKV1-27A0A075B6S5 117 aa9.26□□□□□ -0.93
PTPRK-221ENST00000532331 FANCMQ8IYD8 2048 aa9.26□□□□□ -0.93
PTPRK-221ENST00000532331 PTPRDP23468 1912 aa9.26□□□□□ -0.93
PTPRK-221ENST00000532331 ANAPC1Q9H1A4 1944 aa9.26□□□□□ -0.93
PTPRK-221ENST00000532331 ERVK11-1P61568 191 aa9.26□□□□□ -0.93
PTPRK-221ENST00000532331 IL17RELQ6ZVW7 336 aa9.26□□□□□ -0.93
PTPRK-221ENST00000532331 OR11H12B2RN74 326 aa9.26□□□□□ -0.93
PTPRK-221ENST00000532331 ATP5LO75964 103 aa9.26□□□□□ -0.93
PTPRK-221ENST00000532331 CD55P08174 381 aa9.26□□□□□ -0.93
PTPRK-221ENST00000532331 OR11H1Q8NG94 326 aa9.26□□□□□ -0.93
PTPRK-221ENST00000532331 OR11H2Q8NH07 326 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms