RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 FAM106CPP0CH98 169 aa11.52□□□□□ -0.57
PCF11-204ENST00000530660 FAM106AQ4KMX7 169 aa11.52□□□□□ -0.57
PCF11-204ENST00000530660 ATP5L2Q7Z4Y8 100 aa11.52□□□□□ -0.57
PCF11-204ENST00000530660 SLC25A10Q9UBX3 287 aaPredicted RBP11.52□□□□□ -0.57
PCF11-204ENST00000530660 SVILO95425 2214 aa11.51□□□□□ -0.57
PCF11-204ENST00000530660 IGLV3-12A0A075B6K2 115 aa11.51□□□□□ -0.57
PCF11-204ENST00000530660 FCGR3BO75015 233 aa11.51□□□□□ -0.57
PCF11-204ENST00000530660 CCL3P10147 92 aa11.51□□□□□ -0.57
PCF11-204ENST00000530660 HOXA4Q00056 320 aaPredicted RBP11.51□□□□□ -0.57
PCF11-204ENST00000530660 INO80CQ6PI98 192 aaPredicted RBP11.51□□□□□ -0.57
PCF11-204ENST00000530660 C8orf86Q6ZUL3 223 aa11.51□□□□□ -0.57
PCF11-204ENST00000530660 MOB1BQ7L9L4 216 aa11.51□□□□□ -0.57
PCF11-204ENST00000530660 BCL6BQ8N143 479 aaPredicted RBP11.51□□□□□ -0.57
PCF11-204ENST00000530660 DDB2Q92466 427 aa11.51□□□□□ -0.57
PCF11-204ENST00000530660 TTTY13Q9BZ97 58 aa11.51□□□□□ -0.57
PCF11-204ENST00000530660 A0A096LPE4 126 aa11.51□□□□□ -0.57
PCF11-204ENST00000530660 A0A1W2PPZ6 126 aa11.51□□□□□ -0.57
PCF11-204ENST00000530660 A0A1W2PRD5 423 aa11.51□□□□□ -0.57
PCF11-204ENST00000530660 A0A1W2PRF3 423 aa11.51□□□□□ -0.57
PCF11-204ENST00000530660 A0A1W2PRM7 423 aa11.51□□□□□ -0.57
PCF11-204ENST00000530660 C12orf77C9JDV5 145 aa11.51□□□□□ -0.57
PCF11-204ENST00000530660 APOHP02749 345 aaPredicted RBP11.51□□□□□ -0.57
PCF11-204ENST00000530660 FXYD7P58549 80 aa11.51□□□□□ -0.57
PCF11-204ENST00000530660 LINC00322Q6ZN03 302 aaPredicted RBP11.51□□□□□ -0.57
PCF11-204ENST00000530660 LINC00596Q86U02 117 aa11.51□□□□□ -0.57
PCF11-204ENST00000530660 ZADH2Q8N4Q0 377 aa11.51□□□□□ -0.57
PCF11-204ENST00000530660 OR4X2Q8NGF9 303 aa11.51□□□□□ -0.57
PCF11-204ENST00000530660 OR9G4Q8NGQ1 327 aa11.51□□□□□ -0.57
PCF11-204ENST00000530660 AKIRIN1Q9H9L7 192 aaPredicted RBP11.51□□□□□ -0.57
PCF11-204ENST00000530660 MBNL3Q9NUK0 354 aaKnown RBP11.51□□□□□ -0.57
PCF11-204ENST00000530660 OR11H12B2RN74 326 aa11.5□□□□□ -0.57
PCF11-204ENST00000530660 F8W1H4 67 aa11.5□□□□□ -0.57
PCF11-204ENST00000530660 GNG5P63218 68 aa11.5□□□□□ -0.57
PCF11-204ENST00000530660 AAED1Q7RTV5 226 aa11.5□□□□□ -0.57
PCF11-204ENST00000530660 GCSAMQ8N6F7 178 aa11.5□□□□□ -0.57
PCF11-204ENST00000530660 OR11H1Q8NG94 326 aa11.5□□□□□ -0.57
PCF11-204ENST00000530660 OR11H2Q8NH07 326 aa11.5□□□□□ -0.57
PCF11-204ENST00000530660 Q8TCH9 128 aa11.5□□□□□ -0.57
PCF11-204ENST00000530660 GALMQ96C23 342 aa11.5□□□□□ -0.57
PCF11-204ENST00000530660 TEX50A0A1B0GTY4 177 aa11.5□□□□□ -0.57
PCF11-204ENST00000530660 B5MCH6 92 aa11.5□□□□□ -0.57
PCF11-204ENST00000530660 RFESDQ8TAC1 157 aa11.5□□□□□ -0.57
PCF11-204ENST00000530660 TAAR6Q96RI8 345 aa11.5□□□□□ -0.57
PCF11-204ENST00000530660 PRDM14Q9GZV8 571 aa11.5□□□□□ -0.57
PCF11-204ENST00000530660 AP5S1Q9NUS5 200 aa11.5□□□□□ -0.57
PCF11-204ENST00000530660 ZNF318Q5VUA4 2279 aa11.5□□□□□ -0.57
PCF11-204ENST00000530660 AGRNO00468 2067 aa11.5□□□□□ -0.57
PCF11-204ENST00000530660 A0A1W2PR77 199 aa11.5□□□□□ -0.57
PCF11-204ENST00000530660 ACP1P24666 158 aa11.5□□□□□ -0.57
PCF11-204ENST00000530660 ZBTB34Q8NCN2 500 aa11.5□□□□□ -0.57
PCF11-204ENST00000530660 NHP2Q9NX24 153 aaKnown RBP11.5□□□□□ -0.57
PCF11-204ENST00000530660 IGKV1OR2-108A0A075B7D4 117 aa11.49□□□□□ -0.57
PCF11-204ENST00000530660 ZNF716A6NP11 495 aa11.49□□□□□ -0.57
PCF11-204ENST00000530660 COLCA1Q6ZS62 124 aa11.49□□□□□ -0.57
PCF11-204ENST00000530660 PRRG4Q9BZD6 226 aa11.49□□□□□ -0.57
PCF11-204ENST00000530660 FSCN3Q9NQT6 498 aa11.49□□□□□ -0.57
PCF11-204ENST00000530660 EPOPA6NHQ4 379 aa11.49□□□□□ -0.57
PCF11-204ENST00000530660 C2CD4DB7Z1M9 353 aa11.49□□□□□ -0.57
PCF11-204ENST00000530660 CNIH1O95406 144 aa11.49□□□□□ -0.57
PCF11-204ENST00000530660 TFF1P04155 84 aa11.49□□□□□ -0.57
PCF11-204ENST00000530660 PYYP10082 97 aa11.49□□□□□ -0.57
PCF11-204ENST00000530660 LIFP15018 202 aa11.49□□□□□ -0.57
PCF11-204ENST00000530660 KIR2DL2P43627 348 aaPredicted RBP11.49□□□□□ -0.57
PCF11-204ENST00000530660 CACNG7P62955 275 aa11.49□□□□□ -0.57
PCF11-204ENST00000530660 UBE2L3P68036 154 aaKnown RBP11.49□□□□□ -0.57
PCF11-204ENST00000530660 SYT8Q8NBV8 401 aa11.49□□□□□ -0.57
PCF11-204ENST00000530660 DUSP23Q9BVJ7 150 aa11.49□□□□□ -0.57
PCF11-204ENST00000530660 IGLV3-19P01714 112 aa11.48□□□□□ -0.57
PCF11-204ENST00000530660 LOXL1Q08397 574 aaPredicted RBP11.48□□□□□ -0.57
PCF11-204ENST00000530660 HINT2Q9BX68 163 aa11.48□□□□□ -0.57
PCF11-204ENST00000530660 LTAP01374 205 aa11.48□□□□□ -0.57
PCF11-204ENST00000530660 MYOD1P15172 320 aa11.48□□□□□ -0.57
PCF11-204ENST00000530660 C3AR1Q16581 482 aa11.48□□□□□ -0.57
PCF11-204ENST00000530660 NDFIP1Q9BT67 221 aa11.48□□□□□ -0.57
PCF11-204ENST00000530660 CDIP1Q9H305 208 aa11.48□□□□□ -0.57
PCF11-204ENST00000530660 PROK2Q9HC23 129 aa11.48□□□□□ -0.57
PCF11-204ENST00000530660 TRBV7-9A0A0J9YWB2 115 aa11.48□□□□□ -0.57
PCF11-204ENST00000530660 SCRG1O75711 98 aa11.48□□□□□ -0.57
PCF11-204ENST00000530660 PCBD1P61457 104 aa11.48□□□□□ -0.57
PCF11-204ENST00000530660 YRDCQ86U90 279 aaKnown RBP11.48□□□□□ -0.57
PCF11-204ENST00000530660 PHLDA1Q8WV24 401 aaPredicted RBP11.48□□□□□ -0.57
PCF11-204ENST00000530660 CACNG8Q8WXS5 425 aa11.48□□□□□ -0.57
PCF11-204ENST00000530660 C7orf69Q9H7B7 122 aa11.48□□□□□ -0.57
PCF11-204ENST00000530660 ERG28Q9UKR5 140 aa11.48□□□□□ -0.57
PCF11-204ENST00000530660 TCF19Q9Y242 345 aa11.48□□□□□ -0.57
PCF11-204ENST00000530660 PSPNO60542 156 aa11.47□□□□□ -0.57
PCF11-204ENST00000530660 BRI3O95415 125 aa11.47□□□□□ -0.57
PCF11-204ENST00000530660 DSCR4P56555 118 aaPredicted RBP11.47□□□□□ -0.57
PCF11-204ENST00000530660 FOXF2Q12947 444 aa11.47□□□□□ -0.57
PCF11-204ENST00000530660 MLANAQ16655 118 aa11.47□□□□□ -0.57
PCF11-204ENST00000530660 COL25A1Q9BXS0 654 aaPredicted RBP11.47□□□□□ -0.57
PCF11-204ENST00000530660 PEX7O00628 323 aa11.47□□□□□ -0.57
PCF11-204ENST00000530660 IGHV3-13P01766 116 aa11.47□□□□□ -0.57
PCF11-204ENST00000530660 C1orf122Q6ZSJ8 110 aa11.47□□□□□ -0.57
PCF11-204ENST00000530660 C19orf67A6NJJ6 358 aa11.47□□□□□ -0.57
PCF11-204ENST00000530660 C16orf97H3BN30 126 aa11.47□□□□□ -0.57
PCF11-204ENST00000530660 CXCL13O43927 109 aa11.47□□□□□ -0.57
PCF11-204ENST00000530660 GNG3P63215 75 aa11.47□□□□□ -0.57
PCF11-204ENST00000530660 LINC00312Q9Y6C7 94 aa11.47□□□□□ -0.57
PCF11-204ENST00000530660 PTPRBP23467 1997 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms