RNA–Protein interactions for RNA: ENST00000530468.5

TM9SF1-209, Transcript of transmembrane 9 superfamily member 1, human

TSL 2

Gene TM9SF1, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TM9SF1-209	ENST00000530468	PSMG4	Q5JS54	123 aa		11.26	□□□□□ -0.61
TM9SF1-209	ENST00000530468	C16orf54	Q6UWD8	224 aa		11.26	□□□□□ -0.61
TM9SF1-209	ENST00000530468	OR13C8	Q8NGS7	320 aa		11.26	□□□□□ -0.61
TM9SF1-209	ENST00000530468	RNASEH2C	Q8TDP1	164 aa	Known RBP	11.26	□□□□□ -0.61
TM9SF1-209	ENST00000530468	C15orf40	Q8WUR7	153 aa		11.26	□□□□□ -0.61
TM9SF1-209	ENST00000530468	GLMP	Q8WWB7	406 aa		11.26	□□□□□ -0.61
TM9SF1-209	ENST00000530468	AP3S1	Q92572	193 aa		11.26	□□□□□ -0.61
TM9SF1-209	ENST00000530468	RAB40C	Q96S21	281 aa		11.26	□□□□□ -0.61
TM9SF1-209	ENST00000530468	C1QTNF4	Q9BXJ3	329 aa		11.26	□□□□□ -0.61
TM9SF1-209	ENST00000530468	SEPSECS	Q9HD40	501 aa	Known RBP	11.26	□□□□□ -0.61
TM9SF1-209	ENST00000530468	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	11.26	□□□□□ -0.61
TM9SF1-209	ENST00000530468	CLEC5A	Q9NY25	188 aa		11.26	□□□□□ -0.61
TM9SF1-209	ENST00000530468	CDS2	O95674	445 aa		11.25	□□□□□ -0.61
TM9SF1-209	ENST00000530468	AMBP	P02760	352 aa		11.25	□□□□□ -0.61
TM9SF1-209	ENST00000530468	CD74	P04233	296 aa		11.25	□□□□□ -0.61
TM9SF1-209	ENST00000530468	OR10J1	P30954	320 aa		11.25	□□□□□ -0.61
TM9SF1-209	ENST00000530468	RND2	P52198	227 aa		11.25	□□□□□ -0.61
TM9SF1-209	ENST00000530468	TAS2R19	P59542	299 aa		11.25	□□□□□ -0.61
TM9SF1-209	ENST00000530468	SNRPD3	P62318	126 aa	Known RBP	11.25	□□□□□ -0.61
TM9SF1-209	ENST00000530468	SCGB2B2	Q4G0G5	96 aa		11.25	□□□□□ -0.61
TM9SF1-209	ENST00000530468	C2orf83	Q53S99	150 aa		11.25	□□□□□ -0.61
TM9SF1-209	ENST00000530468	PRSS54	Q6PEW0	395 aa		11.25	□□□□□ -0.61
TM9SF1-209	ENST00000530468		Q6ZRM9	215 aa		11.25	□□□□□ -0.61
TM9SF1-209	ENST00000530468	GPR141	Q7Z602	305 aa		11.25	□□□□□ -0.61
TM9SF1-209	ENST00000530468	TMEM229B	Q8NBD8	167 aa		11.25	□□□□□ -0.61
TM9SF1-209	ENST00000530468	TMEM222	Q9H0R3	208 aa		11.25	□□□□□ -0.61
TM9SF1-209	ENST00000530468	HEYL	Q9NQ87	328 aa	Predicted RBP	11.25	□□□□□ -0.61
TM9SF1-209	ENST00000530468	EXTL2	Q9UBQ6	330 aa		11.25	□□□□□ -0.61
TM9SF1-209	ENST00000530468	HECTD4	Q9Y4D8	3996 aa		11.24	□□□□□ -0.61
TM9SF1-209	ENST00000530468	GSTZ1	O43708	216 aa	Predicted RBP	11.24	□□□□□ -0.61
TM9SF1-209	ENST00000530468	RAB3D	O95716	219 aa		11.24	□□□□□ -0.61
TM9SF1-209	ENST00000530468	ETFRF1	Q6IPR1	90 aa		11.24	□□□□□ -0.61
TM9SF1-209	ENST00000530468	SLC24A4	Q8NFF2	622 aa		11.24	□□□□□ -0.61
TM9SF1-209	ENST00000530468	OR4D10	Q8NGI6	311 aa		11.24	□□□□□ -0.61
TM9SF1-209	ENST00000530468	MARCH1	Q8TCQ1	289 aa		11.24	□□□□□ -0.61
TM9SF1-209	ENST00000530468	RBPMS	Q93062	196 aa	Known RBP	11.24	□□□□□ -0.61
TM9SF1-209	ENST00000530468	ABHD1	Q96SE0	405 aa		11.24	□□□□□ -0.61
TM9SF1-209	ENST00000530468	CACFD1	Q9UGQ2	172 aa		11.24	□□□□□ -0.61
TM9SF1-209	ENST00000530468	C14orf166	Q9Y224	244 aa	Known RBP	11.24	□□□□□ -0.61
TM9SF1-209	ENST00000530468	DNAH6	Q9C0G6	4158 aa		11.24	□□□□□ -0.61
TM9SF1-209	ENST00000530468	DEFB131B	A0A096LNP1	70 aa		11.23	□□□□□ -0.61
TM9SF1-209	ENST00000530468	FAM90A26	D6RGX4	464 aa		11.23	□□□□□ -0.61
TM9SF1-209	ENST00000530468	NOL3	O60936	208 aa	Known RBP	11.23	□□□□□ -0.61
TM9SF1-209	ENST00000530468	IL4	P05112	153 aa		11.23	□□□□□ -0.61
TM9SF1-209	ENST00000530468	OR5AC1	P0C628	307 aa		11.23	□□□□□ -0.61
TM9SF1-209	ENST00000530468	ZNF182	P17025	639 aa	Predicted RBP	11.23	□□□□□ -0.61
TM9SF1-209	ENST00000530468	DHODH	Q02127	395 aa		11.23	□□□□□ -0.61
TM9SF1-209	ENST00000530468	STEAP1B	Q6NZ63	245 aa		11.23	□□□□□ -0.61
TM9SF1-209	ENST00000530468	NOXA1	Q86UR1	476 aa		11.23	□□□□□ -0.61
TM9SF1-209	ENST00000530468	GLYATL2	Q8WU03	294 aa		11.23	□□□□□ -0.61
TM9SF1-209	ENST00000530468	NRN1	Q9NPD7	142 aa		11.23	□□□□□ -0.61
TM9SF1-209	ENST00000530468	CELA1	Q9UNI1	258 aa		11.23	□□□□□ -0.61
TM9SF1-209	ENST00000530468	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	11.22	□□□□□ -0.61
TM9SF1-209	ENST00000530468	CEBPZOS	A8MTT3	80 aa		11.22	□□□□□ -0.61
TM9SF1-209	ENST00000530468		P0DMU3	169 aa		11.22	□□□□□ -0.61
TM9SF1-209	ENST00000530468	FAM231A	P0DMU4	169 aa		11.22	□□□□□ -0.61
TM9SF1-209	ENST00000530468	FAM231C	P0DMU5	169 aa		11.22	□□□□□ -0.61
TM9SF1-209	ENST00000530468	NPY1R	P25929	384 aa		11.22	□□□□□ -0.61
TM9SF1-209	ENST00000530468	SSBP1	Q04837	148 aa	Known RBP	11.22	□□□□□ -0.61
TM9SF1-209	ENST00000530468	SURF2	Q15527	256 aa	Predicted RBP	11.22	□□□□□ -0.61
TM9SF1-209	ENST00000530468	USF2	Q15853	346 aa	Predicted RBP	11.22	□□□□□ -0.61
TM9SF1-209	ENST00000530468	C12orf74	Q32Q52	190 aa		11.22	□□□□□ -0.61
TM9SF1-209	ENST00000530468	NAA60	Q9H7X0	242 aa		11.22	□□□□□ -0.61
TM9SF1-209	ENST00000530468	CACNG5	Q9UF02	275 aa		11.22	□□□□□ -0.61
TM9SF1-209	ENST00000530468	AGRN	O00468	2067 aa		11.21	□□□□□ -0.61
TM9SF1-209	ENST00000530468		H3BMM0	161 aa		11.21	□□□□□ -0.61
TM9SF1-209	ENST00000530468	GABARAP	H6UMI1	98 aa		11.21	□□□□□ -0.61
TM9SF1-209	ENST00000530468	BUB3	O43684	328 aa		11.21	□□□□□ -0.61
TM9SF1-209	ENST00000530468	GABARAP	O95166	117 aa		11.21	□□□□□ -0.61
TM9SF1-209	ENST00000530468	TOMM40	O96008	361 aa		11.21	□□□□□ -0.61
TM9SF1-209	ENST00000530468	NUP62	P37198	522 aa	Predicted RBP	11.21	□□□□□ -0.61
TM9SF1-209	ENST00000530468	MRPS10	P82664	201 aa	Known RBP	11.21	□□□□□ -0.61
TM9SF1-209	ENST00000530468	MEF2D	Q14814	521 aa		11.21	□□□□□ -0.61
TM9SF1-209	ENST00000530468	SIGLEC15	Q6ZMC9	328 aa		11.21	□□□□□ -0.61
TM9SF1-209	ENST00000530468	SELENOH	Q8IZQ5	122 aa	Known RBP	11.21	□□□□□ -0.61
TM9SF1-209	ENST00000530468	POM121L12	Q8N7R1	296 aa		11.21	□□□□□ -0.61
TM9SF1-209	ENST00000530468	LHFPL5	Q8TAF8	219 aa		11.21	□□□□□ -0.61
TM9SF1-209	ENST00000530468	RTBDN	Q9BSG5	229 aa	Predicted RBP	11.21	□□□□□ -0.61
TM9SF1-209	ENST00000530468	NDUFAF3	Q9BU61	184 aa		11.21	□□□□□ -0.61
TM9SF1-209	ENST00000530468	XCL2	Q9UBD3	114 aa		11.21	□□□□□ -0.61
TM9SF1-209	ENST00000530468	KIAA1109	Q2LD37	5005 aa		11.21	□□□□□ -0.61
TM9SF1-209	ENST00000530468	RD3L	P0DJH9	198 aa		11.2	□□□□□ -0.62
TM9SF1-209	ENST00000530468	HLA-DRB4	P13762	266 aa		11.2	□□□□□ -0.62
TM9SF1-209	ENST00000530468	NKX2-1	P43699	371 aa	Predicted RBP	11.2	□□□□□ -0.62
TM9SF1-209	ENST00000530468	GPR107	Q5VW38	600 aa		11.2	□□□□□ -0.62
TM9SF1-209	ENST00000530468	NPIPB3	Q92617	1050 aa		11.2	□□□□□ -0.62
TM9SF1-209	ENST00000530468	GPR146	Q96CH1	333 aa		11.2	□□□□□ -0.62
TM9SF1-209	ENST00000530468	NEU1	Q99519	415 aa		11.2	□□□□□ -0.62
TM9SF1-209	ENST00000530468	PFDN2	Q9UHV9	154 aa		11.2	□□□□□ -0.62
TM9SF1-209	ENST00000530468	HLA-DRB4	X5D2U9	266 aa		11.2	□□□□□ -0.62
TM9SF1-209	ENST00000530468	TMEM189	A5PLL7	270 aa		11.19	□□□□□ -0.62
TM9SF1-209	ENST00000530468	DISC1	C4P0D8	188 aa		11.19	□□□□□ -0.62
TM9SF1-209	ENST00000530468	NMS	Q5H8A3	153 aa		11.19	□□□□□ -0.62
TM9SF1-209	ENST00000530468	TMEM268	Q5VZI3	342 aa		11.19	□□□□□ -0.62
TM9SF1-209	ENST00000530468	ZNF767P	Q75MW2	155 aa		11.19	□□□□□ -0.62
TM9SF1-209	ENST00000530468	TMEM170A	Q8WVE7	144 aa		11.19	□□□□□ -0.62
TM9SF1-209	ENST00000530468	ACY3	Q96HD9	319 aa		11.19	□□□□□ -0.62
TM9SF1-209	ENST00000530468	BCL7B	Q9BQE9	202 aa		11.19	□□□□□ -0.62
TM9SF1-209	ENST00000530468	TMEM56-RWDD3	S4R434	201 aa		11.19	□□□□□ -0.62
TM9SF1-209	ENST00000530468		A0A1B0GVY2	172 aa		11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms