RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 SPCS3P61009 180 aa14.99□□□□□ -0.01
TSPAN4-219ENST00000530404 TMEM41BQ5BJD5 291 aa14.99□□□□□ -0.01
TSPAN4-219ENST00000530404 C16orf54Q6UWD8 224 aa14.99□□□□□ -0.01
TSPAN4-219ENST00000530404 TMEM229BQ8NBD8 167 aa14.99□□□□□ -0.01
TSPAN4-219ENST00000530404 GLMPQ8WWB7 406 aa14.99□□□□□ -0.01
TSPAN4-219ENST00000530404 RAB40CQ96S21 281 aa14.99□□□□□ -0.01
TSPAN4-219ENST00000530404 U3KQE9 123 aa14.99□□□□□ -0.01
TSPAN4-219ENST00000530404 TRAV30A0A087WSZ9 112 aa14.98□□□□□ -0.01
TSPAN4-219ENST00000530404 TRAV10A0A0B4J240 114 aa14.98□□□□□ -0.01
TSPAN4-219ENST00000530404 CD74P04233 296 aa14.98□□□□□ -0.01
TSPAN4-219ENST00000530404 HNRNPCP07910 306 aaKnown RBP eCLIP14.98□□□□□ -0.01
TSPAN4-219ENST00000530404 IGLC1P0CG04 106 aa14.98□□□□□ -0.01
TSPAN4-219ENST00000530404 TBPP20226 339 aa14.98□□□□□ -0.01
TSPAN4-219ENST00000530404 HTR2BP41595 481 aa14.98□□□□□ -0.01
TSPAN4-219ENST00000530404 STEAP1BQ6NZ63 245 aa14.98□□□□□ -0.01
TSPAN4-219ENST00000530404 PRSS54Q6PEW0 395 aa14.98□□□□□ -0.01
TSPAN4-219ENST00000530404 CSNK1G2-AS1Q8NCQ2 148 aa14.98□□□□□ -0.01
TSPAN4-219ENST00000530404 GPR146Q96CH1 333 aa14.98□□□□□ -0.01
TSPAN4-219ENST00000530404 HEYLQ9NQ87 328 aaPredicted RBP14.98□□□□□ -0.01
TSPAN4-219ENST00000530404 CACNG5Q9UF02 275 aa14.98□□□□□ -0.01
TSPAN4-219ENST00000530404 TBC1D24Q9ULP9 559 aa14.98□□□□□ -0.01
TSPAN4-219ENST00000530404 PKD1P98161 4303 aa14.98□□□□□ -0.01
TSPAN4-219ENST00000530404 RPS10-NUDT3A0A1W2PQS6 291 aa14.97□□□□□ -0.01
TSPAN4-219ENST00000530404 HELTA6NFD8 242 aa14.97□□□□□ -0.01
TSPAN4-219ENST00000530404 OR10J1P30954 320 aa14.97□□□□□ -0.01
TSPAN4-219ENST00000530404 TAS2R19P59542 299 aa14.97□□□□□ -0.01
TSPAN4-219ENST00000530404 DHODHQ02127 395 aa14.97□□□□□ -0.01
TSPAN4-219ENST00000530404 MEF2DQ14814 521 aa14.97□□□□□ -0.01
TSPAN4-219ENST00000530404 USF2Q15853 346 aaPredicted RBP14.97□□□□□ -0.01
TSPAN4-219ENST00000530404 SELENOHQ8IZQ5 122 aaKnown RBP14.97□□□□□ -0.01
TSPAN4-219ENST00000530404 OR1S2Q8NGQ3 325 aa14.97□□□□□ -0.01
TSPAN4-219ENST00000530404 GLYATL2Q8WU03 294 aa14.97□□□□□ -0.01
TSPAN4-219ENST00000530404 TMEM170AQ8WVE7 144 aa14.97□□□□□ -0.01
TSPAN4-219ENST00000530404 RTBDNQ9BSG5 229 aaPredicted RBP14.97□□□□□ -0.01
TSPAN4-219ENST00000530404 TMEM222Q9H0R3 208 aa14.97□□□□□ -0.01
TSPAN4-219ENST00000530404 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.97□□□□□ -0.01
TSPAN4-219ENST00000530404 CEBPZOSA8MTT3 80 aa14.96□□□□□ -0.01
TSPAN4-219ENST00000530404 CDS2O95674 445 aa14.96□□□□□ -0.01
TSPAN4-219ENST00000530404 IL4P05112 153 aa14.96□□□□□ -0.01
TSPAN4-219ENST00000530404 ZNF182P17025 639 aaPredicted RBP14.96□□□□□ -0.01
TSPAN4-219ENST00000530404 CTF1Q16619 201 aa14.96□□□□□ -0.01
TSPAN4-219ENST00000530404 C2orf83Q53S99 150 aa14.96□□□□□ -0.01
TSPAN4-219ENST00000530404 Q8WTZ3 238 aa14.96□□□□□ -0.01
TSPAN4-219ENST00000530404 AP3S1Q92572 193 aa14.96□□□□□ -0.01
TSPAN4-219ENST00000530404 SCRT1Q9BWW7 348 aa14.96□□□□□ -0.01
TSPAN4-219ENST00000530404 NAA60Q9H7X0 242 aa14.96□□□□□ -0.01
TSPAN4-219ENST00000530404 C14orf166Q9Y224 244 aaKnown RBP14.96□□□□□ -0.01
TSPAN4-219ENST00000530404 TEX13DA0A0J9YY54 714 aaPredicted RBP14.95□□□□□ -0.02
TSPAN4-219ENST00000530404 EIF2B2P49770 351 aaKnown RBP14.95□□□□□ -0.02
TSPAN4-219ENST00000530404 AARDQ4LEZ3 155 aa14.95□□□□□ -0.02
TSPAN4-219ENST00000530404 FAM219AQ8IW50 185 aa14.95□□□□□ -0.02
TSPAN4-219ENST00000530404 SLC24A4Q8NFF2 622 aa14.95□□□□□ -0.02
TSPAN4-219ENST00000530404 OR52E5Q8NH55 327 aa14.95□□□□□ -0.02
TSPAN4-219ENST00000530404 RBPMSQ93062 196 aaKnown RBP14.95□□□□□ -0.02
TSPAN4-219ENST00000530404 MIXL1Q9H2W2 232 aa14.95□□□□□ -0.02
TSPAN4-219ENST00000530404 PRR13Q9NZ81 148 aa14.95□□□□□ -0.02
TSPAN4-219ENST00000530404 XCL2Q9UBD3 114 aa14.95□□□□□ -0.02
TSPAN4-219ENST00000530404 GABARAPO95166 117 aa14.94□□□□□ -0.02
TSPAN4-219ENST00000530404 YPEL3P61236 119 aaPredicted RBP14.94□□□□□ -0.02
TSPAN4-219ENST00000530404 C12orf74Q32Q52 190 aa14.94□□□□□ -0.02
TSPAN4-219ENST00000530404 TMEM268Q5VZI3 342 aa14.94□□□□□ -0.02
TSPAN4-219ENST00000530404 CENPSQ8N2Z9 138 aa14.94□□□□□ -0.02
TSPAN4-219ENST00000530404 NPIPB3Q92617 1050 aa14.94□□□□□ -0.02
TSPAN4-219ENST00000530404 FAM90A26D6RGX4 464 aa14.93□□□□□ -0.02
TSPAN4-219ENST00000530404 B3GALNT1O75752 331 aa14.93□□□□□ -0.02
TSPAN4-219ENST00000530404 SLC25A4P12235 298 aa14.93□□□□□ -0.02
TSPAN4-219ENST00000530404 RNASEH2CQ8TDP1 164 aaKnown RBP14.93□□□□□ -0.02
TSPAN4-219ENST00000530404 ACY3Q96HD9 319 aa14.93□□□□□ -0.02
TSPAN4-219ENST00000530404 DEFB131BA0A096LNP1 70 aa14.92□□□□□ -0.02
TSPAN4-219ENST00000530404 GABARAPH6UMI1 98 aa14.92□□□□□ -0.02
TSPAN4-219ENST00000530404 DEFB1P60022 68 aa14.92□□□□□ -0.02
TSPAN4-219ENST00000530404 GPR107Q5VW38 600 aa14.92□□□□□ -0.02
TSPAN4-219ENST00000530404 GSG1LQ6UXU4 331 aa14.92□□□□□ -0.02
TSPAN4-219ENST00000530404 SIGLEC15Q6ZMC9 328 aa14.92□□□□□ -0.02
TSPAN4-219ENST00000530404 RNF126Q9BV68 326 aa14.92□□□□□ -0.02
TSPAN4-219ENST00000530404 CRYM-AS1A6NIL9 109 aa14.91□□□□□ -0.02
TSPAN4-219ENST00000530404 H3BMM0 161 aa14.91□□□□□ -0.02
TSPAN4-219ENST00000530404 TOMM40O96008 361 aa14.91□□□□□ -0.02
TSPAN4-219ENST00000530404 SMIM18P0DKX4 95 aa14.91□□□□□ -0.02
TSPAN4-219ENST00000530404 NPY1RP25929 384 aa14.91□□□□□ -0.02
TSPAN4-219ENST00000530404 AP2S1P53680 142 aaPredicted RBP14.91□□□□□ -0.02
TSPAN4-219ENST00000530404 FXYD7P58549 80 aa14.91□□□□□ -0.02
TSPAN4-219ENST00000530404 OR51G1Q8NGK1 321 aa14.91□□□□□ -0.02
TSPAN4-219ENST00000530404 OR4C16Q8NGL9 310 aa14.91□□□□□ -0.02
TSPAN4-219ENST00000530404 NRN1Q9NPD7 142 aa14.91□□□□□ -0.02
TSPAN4-219ENST00000530404 DNAH11Q96DT5 4516 aa14.9□□□□□ -0.02
TSPAN4-219ENST00000530404 DISC1C4P0D8 188 aa14.9□□□□□ -0.02
TSPAN4-219ENST00000530404 CTDSP2O14595 271 aa14.9□□□□□ -0.02
TSPAN4-219ENST00000530404 RGS5O15539 181 aa14.9□□□□□ -0.02
TSPAN4-219ENST00000530404 BUB3O43684 328 aa14.9□□□□□ -0.02
TSPAN4-219ENST00000530404 SNRPD3P62318 126 aaKnown RBP14.9□□□□□ -0.02
TSPAN4-219ENST00000530404 GDF5OSQ5U4N7 250 aa14.9□□□□□ -0.02
TSPAN4-219ENST00000530404 C15orf40Q8WUR7 153 aa14.9□□□□□ -0.02
TSPAN4-219ENST00000530404 GPR132Q9UNW8 380 aa14.9□□□□□ -0.02
TSPAN4-219ENST00000530404 NACAE9PAV3 2078 aa14.89□□□□□ -0.03
TSPAN4-219ENST00000530404 RYR1P21817 5038 aa14.89□□□□□ -0.03
TSPAN4-219ENST00000530404 IGKV3-20P01619 116 aa14.89□□□□□ -0.03
TSPAN4-219ENST00000530404 AMBPP02760 352 aa14.89□□□□□ -0.03
TSPAN4-219ENST00000530404 RD3LP0DJH9 198 aa14.89□□□□□ -0.03
TSPAN4-219ENST00000530404 PSG1P11464 419 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms