RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 FAT2Q9NYQ8 4349 aa6.41□□□□□ -1.38
SSBP3-212ENST00000528930 IGLV11-55A0A075B6I3 123 aa6.41□□□□□ -1.38
SSBP3-212ENST00000528930 BMPR1BO00238 502 aa6.41□□□□□ -1.38
SSBP3-212ENST00000528930 IGLV1-51P01701 117 aa6.41□□□□□ -1.38
SSBP3-212ENST00000528930 IFNA6P05013 189 aa6.41□□□□□ -1.38
SSBP3-212ENST00000528930 REG1AP05451 166 aa6.41□□□□□ -1.38
SSBP3-212ENST00000528930 TBPP20226 339 aa6.41□□□□□ -1.38
SSBP3-212ENST00000528930 CCR6P51684 374 aa6.41□□□□□ -1.38
SSBP3-212ENST00000528930 SYNJ2BPP57105 145 aa6.41□□□□□ -1.38
SSBP3-212ENST00000528930 TAS2R19P59542 299 aa6.41□□□□□ -1.38
SSBP3-212ENST00000528930 RND3P61587 244 aa6.41□□□□□ -1.38
SSBP3-212ENST00000528930 RBMS2Q15434 407 aaKnown RBP6.41□□□□□ -1.38
SSBP3-212ENST00000528930 C15orf32Q32M92 178 aa6.41□□□□□ -1.38
SSBP3-212ENST00000528930 HAPLN4Q86UW8 402 aa6.41□□□□□ -1.38
SSBP3-212ENST00000528930 OR10W1Q8NGF6 305 aa6.41□□□□□ -1.38
SSBP3-212ENST00000528930 OR9G4Q8NGQ1 327 aa6.41□□□□□ -1.38
SSBP3-212ENST00000528930 COQ8AQ8NI60 647 aa6.41□□□□□ -1.38
SSBP3-212ENST00000528930 STOML3Q8TAV4 291 aa6.41□□□□□ -1.38
SSBP3-212ENST00000528930 SFT2D1Q8WV19 159 aa6.41□□□□□ -1.38
SSBP3-212ENST00000528930 ST8SIA2Q92186 375 aa6.41□□□□□ -1.38
SSBP3-212ENST00000528930 SEC22AQ96IW7 307 aa6.41□□□□□ -1.38
SSBP3-212ENST00000528930 OR4C12Q96R67 309 aa6.41□□□□□ -1.38
SSBP3-212ENST00000528930 SLC25A21Q9BQT8 299 aaPredicted RBP6.41□□□□□ -1.38
SSBP3-212ENST00000528930 SRSF8Q9BRL6 282 aaKnown RBP6.41□□□□□ -1.38
SSBP3-212ENST00000528930 QTRT1Q9BXR0 403 aaKnown RBP6.41□□□□□ -1.38
SSBP3-212ENST00000528930 SEC11CQ9BY50 192 aa6.41□□□□□ -1.38
SSBP3-212ENST00000528930 COMMD5Q9GZQ3 224 aa6.41□□□□□ -1.38
SSBP3-212ENST00000528930 MFFQ9GZY8 342 aa6.41□□□□□ -1.38
SSBP3-212ENST00000528930 ARL6Q9H0F7 186 aa6.41□□□□□ -1.38
SSBP3-212ENST00000528930 NDUFA4L2Q9NRX3 87 aa6.41□□□□□ -1.38
SSBP3-212ENST00000528930 FBXL7Q9UJT9 491 aa6.41□□□□□ -1.38
SSBP3-212ENST00000528930 NSG2Q9Y328 171 aa6.41□□□□□ -1.38
SSBP3-212ENST00000528930 PCP4L1A6NKN8 68 aa6.4□□□□□ -1.38
SSBP3-212ENST00000528930 PPP5D1E7EU14 171 aa6.4□□□□□ -1.38
SSBP3-212ENST00000528930 UBE2CO00762 179 aa6.4□□□□□ -1.38
SSBP3-212ENST00000528930 RAB3DO95716 219 aa6.4□□□□□ -1.38
SSBP3-212ENST00000528930 CSN3P07498 182 aa6.4□□□□□ -1.38
SSBP3-212ENST00000528930 HIST1H1BP16401 226 aaKnown RBP6.4□□□□□ -1.38
SSBP3-212ENST00000528930 PVALBP20472 110 aaPredicted RBP6.4□□□□□ -1.38
SSBP3-212ENST00000528930 ERVK-16P61578 105 aa6.4□□□□□ -1.38
SSBP3-212ENST00000528930 WT1-ASQ06250 92 aa6.4□□□□□ -1.38
SSBP3-212ENST00000528930 RPEL1Q2QD12 228 aa6.4□□□□□ -1.38
SSBP3-212ENST00000528930 FAAP20Q6NZ36 180 aa6.4□□□□□ -1.38
SSBP3-212ENST00000528930 STEAP1BQ6NZ63 245 aa6.4□□□□□ -1.38
SSBP3-212ENST00000528930 ATRAIDQ6UW56 229 aa6.4□□□□□ -1.38
SSBP3-212ENST00000528930 C15orf54Q8N8G6 183 aa6.4□□□□□ -1.38
SSBP3-212ENST00000528930 BPIFCQ8NFQ6 507 aa6.4□□□□□ -1.38
SSBP3-212ENST00000528930 OR1L8Q8NGR8 309 aa6.4□□□□□ -1.38
SSBP3-212ENST00000528930 TERB2Q8NHR7 220 aa6.4□□□□□ -1.38
SSBP3-212ENST00000528930 SAT2Q96F10 170 aaPredicted RBP6.4□□□□□ -1.38
SSBP3-212ENST00000528930 CCDC140Q96MF4 163 aa6.4□□□□□ -1.38
SSBP3-212ENST00000528930 ELOVL1Q9BW60 279 aa6.4□□□□□ -1.38
SSBP3-212ENST00000528930 S4R3C0 116 aa6.4□□□□□ -1.38
SSBP3-212ENST00000528930 VPS13DQ5THJ4 4388 aa6.4□□□□□ -1.38
SSBP3-212ENST00000528930 C5orf52A6NGY3 159 aa6.39□□□□□ -1.39
SSBP3-212ENST00000528930 FAM74A7A6NL05 159 aa6.39□□□□□ -1.39
SSBP3-212ENST00000528930 C15orf61A6NNL5 157 aa6.39□□□□□ -1.39
SSBP3-212ENST00000528930 DISC1C4P0D8 188 aa6.39□□□□□ -1.39
SSBP3-212ENST00000528930 H0Y980 276 aa6.39□□□□□ -1.39
SSBP3-212ENST00000528930 BCL2L11O43521 198 aa6.39□□□□□ -1.39
SSBP3-212ENST00000528930 DEDDO75618 318 aa6.39□□□□□ -1.39
SSBP3-212ENST00000528930 OR2C1O95371 312 aa6.39□□□□□ -1.39
SSBP3-212ENST00000528930 IGHV3-23P01764 117 aa6.39□□□□□ -1.39
SSBP3-212ENST00000528930 HLA-AP01891 365 aaKnown RBP6.39□□□□□ -1.39
SSBP3-212ENST00000528930 SERPINE2P07093 398 aa6.39□□□□□ -1.39
SSBP3-212ENST00000528930 FABP1P07148 127 aa6.39□□□□□ -1.39
SSBP3-212ENST00000528930 P0C879 139 aa6.39□□□□□ -1.39
SSBP3-212ENST00000528930 DEFA4P12838 97 aa6.39□□□□□ -1.39
SSBP3-212ENST00000528930 GP9P14770 177 aa6.39□□□□□ -1.39
SSBP3-212ENST00000528930 PGAM2P15259 253 aa6.39□□□□□ -1.39
SSBP3-212ENST00000528930 S100GP29377 79 aa6.39□□□□□ -1.39
SSBP3-212ENST00000528930 MFAP2P55001 183 aa6.39□□□□□ -1.39
SSBP3-212ENST00000528930 PIGPP57054 158 aa6.39□□□□□ -1.39
SSBP3-212ENST00000528930 RAB5BP61020 215 aa6.39□□□□□ -1.39
SSBP3-212ENST00000528930 SCGB2B2Q4G0G5 96 aa6.39□□□□□ -1.39
SSBP3-212ENST00000528930 FAM74A3Q4VXF1 159 aa6.39□□□□□ -1.39
SSBP3-212ENST00000528930 FAM209BQ5JX69 171 aa6.39□□□□□ -1.39
SSBP3-212ENST00000528930 ALKAL2Q6UX46 152 aa6.39□□□□□ -1.39
SSBP3-212ENST00000528930 CLEC19AQ6UXS0 136 aa6.39□□□□□ -1.39
SSBP3-212ENST00000528930 ACOT7LQ6ZUV0 252 aa6.39□□□□□ -1.39
SSBP3-212ENST00000528930 OR4C16Q8NGL9 310 aa6.39□□□□□ -1.39
SSBP3-212ENST00000528930 OR13C8Q8NGS7 320 aa6.39□□□□□ -1.39
SSBP3-212ENST00000528930 MARCH1Q8TCQ1 289 aa6.39□□□□□ -1.39
SSBP3-212ENST00000528930 TP53RKQ96S44 253 aa6.39□□□□□ -1.39
SSBP3-212ENST00000528930 RTBDNQ9BSG5 229 aaPredicted RBP6.39□□□□□ -1.39
SSBP3-212ENST00000528930 TMEM14BQ9NUH8 114 aa6.39□□□□□ -1.39
SSBP3-212ENST00000528930 SIGLEC8Q9NYZ4 499 aa6.39□□□□□ -1.39
SSBP3-212ENST00000528930 PRNDQ9UKY0 176 aa6.39□□□□□ -1.39
SSBP3-212ENST00000528930 OR51B2Q9Y5P1 312 aa6.39□□□□□ -1.39
SSBP3-212ENST00000528930 C3orf85A0A1B0GTC6 90 aa6.38□□□□□ -1.39
SSBP3-212ENST00000528930 KANTRA0A1W2PQU2 76 aa6.38□□□□□ -1.39
SSBP3-212ENST00000528930 ARPC5O15511 151 aa6.38□□□□□ -1.39
SSBP3-212ENST00000528930 GGCTO75223 188 aaKnown RBP6.38□□□□□ -1.39
SSBP3-212ENST00000528930 LY86O95711 162 aa6.38□□□□□ -1.39
SSBP3-212ENST00000528930 IGKV1-5P01602 117 aa6.38□□□□□ -1.39
SSBP3-212ENST00000528930 RLN2P04090 185 aa6.38□□□□□ -1.39
SSBP3-212ENST00000528930 CLEC3BP05452 202 aa6.38□□□□□ -1.39
SSBP3-212ENST00000528930 CTSDP07339 412 aaPredicted RBP6.38□□□□□ -1.39
SSBP3-212ENST00000528930 AKAIN1P0CW23 69 aa6.38□□□□□ -1.39
SSBP3-212ENST00000528930 OR13C7P0DN81 318 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms