RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 RPL35AP18077 110 aaKnown RBP10.66□□□□□ -0.7
CAPN1-216ENST00000528739 OR10J1P30954 320 aa10.66□□□□□ -0.7
CAPN1-216ENST00000528739 ZFAND6Q6FIF0 208 aa10.66□□□□□ -0.7
CAPN1-216ENST00000528739 PRSS54Q6PEW0 395 aa10.66□□□□□ -0.7
CAPN1-216ENST00000528739 OR1S2Q8NGQ3 325 aa10.66□□□□□ -0.7
CAPN1-216ENST00000528739 NPIPB3Q92617 1050 aa10.66□□□□□ -0.7
CAPN1-216ENST00000528739 HSPB7Q9UBY9 170 aa10.66□□□□□ -0.7
CAPN1-216ENST00000528739 MED6O75586 246 aa10.65□□□□□ -0.7
CAPN1-216ENST00000528739 DFFBO76075 338 aa10.65□□□□□ -0.7
CAPN1-216ENST00000528739 CD5P06127 495 aa10.65□□□□□ -0.7
CAPN1-216ENST00000528739 APOC4P55056 127 aa10.65□□□□□ -0.7
CAPN1-216ENST00000528739 CMC4P56277 68 aaPredicted RBP10.65□□□□□ -0.7
CAPN1-216ENST00000528739 RAB11AP62491 216 aa10.65□□□□□ -0.7
CAPN1-216ENST00000528739 APRG1Q8IVJ8 170 aa10.65□□□□□ -0.7
CAPN1-216ENST00000528739 ZFAND3Q9H8U3 227 aa10.65□□□□□ -0.7
CAPN1-216ENST00000528739 RABAC1Q9UI14 185 aa10.65□□□□□ -0.7
CAPN1-216ENST00000528739 FLVCR2Q9UPI3 526 aa10.65□□□□□ -0.7
CAPN1-216ENST00000528739 TMED3Q9Y3Q3 217 aa10.65□□□□□ -0.7
CAPN1-216ENST00000528739 HUWE1Q7Z6Z7 4374 aaKnown RBP10.65□□□□□ -0.71
CAPN1-216ENST00000528739 WRBO00258 174 aa10.64□□□□□ -0.71
CAPN1-216ENST00000528739 NDUFB6O95139 128 aa10.64□□□□□ -0.71
CAPN1-216ENST00000528739 C4orf46Q504U0 113 aa10.64□□□□□ -0.71
CAPN1-216ENST00000528739 GGNBP1Q5YKI7 109 aa10.64□□□□□ -0.71
CAPN1-216ENST00000528739 COQ8AQ8NI60 647 aa10.64□□□□□ -0.71
CAPN1-216ENST00000528739 GRAMD2BQ96HH9 432 aa10.64□□□□□ -0.71
CAPN1-216ENST00000528739 ZNF414Q96IQ9 312 aa10.64□□□□□ -0.71
CAPN1-216ENST00000528739 SLC35E1Q96K37 410 aa10.64□□□□□ -0.71
CAPN1-216ENST00000528739 MAGT1Q9H0U3 335 aa10.64□□□□□ -0.71
CAPN1-216ENST00000528739 C9orf170A2RU37 121 aa10.63□□□□□ -0.71
CAPN1-216ENST00000528739 ZFP92A6NM28 416 aa10.63□□□□□ -0.71
CAPN1-216ENST00000528739 IFNA21P01568 189 aa10.63□□□□□ -0.71
CAPN1-216ENST00000528739 IGKV1-17P01599 117 aa10.63□□□□□ -0.71
CAPN1-216ENST00000528739 IGLC1P0CG04 106 aa10.63□□□□□ -0.71
CAPN1-216ENST00000528739 RD3LP0DJH9 198 aa10.63□□□□□ -0.71
CAPN1-216ENST00000528739 IL7P13232 177 aa10.63□□□□□ -0.71
CAPN1-216ENST00000528739 UBE2MP61081 183 aaKnown RBP10.63□□□□□ -0.71
CAPN1-216ENST00000528739 RPP30P78346 268 aaKnown RBP10.63□□□□□ -0.71
CAPN1-216ENST00000528739 ODF3L2Q3SX64 289 aa10.63□□□□□ -0.71
CAPN1-216ENST00000528739 LILRB2Q8N423 598 aa10.63□□□□□ -0.71
CAPN1-216ENST00000528739 STPG3Q8N7X2 389 aa10.63□□□□□ -0.71
CAPN1-216ENST00000528739 LRTM2Q8N967 370 aa10.63□□□□□ -0.71
CAPN1-216ENST00000528739 STXBP6Q8NFX7 210 aa10.63□□□□□ -0.71
CAPN1-216ENST00000528739 TMEM170AQ8WVE7 144 aa10.63□□□□□ -0.71
CAPN1-216ENST00000528739 C7orf50Q9BRJ6 194 aaKnown RBP10.63□□□□□ -0.71
CAPN1-216ENST00000528739 COL7A1Q02388 2944 aa10.63□□□□□ -0.71
CAPN1-216ENST00000528739 IL4P05112 153 aa10.62□□□□□ -0.71
CAPN1-216ENST00000528739 OR4E1P0C645 316 aa10.62□□□□□ -0.71
CAPN1-216ENST00000528739 SLC25A6P12236 298 aa10.62□□□□□ -0.71
CAPN1-216ENST00000528739 ANXA7P20073 488 aaKnown RBP10.62□□□□□ -0.71
CAPN1-216ENST00000528739 P2RY1P47900 373 aa10.62□□□□□ -0.71
CAPN1-216ENST00000528739 EIF2B2P49770 351 aaKnown RBP10.62□□□□□ -0.71
CAPN1-216ENST00000528739 CASC10Q5T4H9 136 aa10.62□□□□□ -0.71
CAPN1-216ENST00000528739 FAM90A2PQ658T7 463 aa10.62□□□□□ -0.71
CAPN1-216ENST00000528739 CIB3Q96Q77 187 aaPredicted RBP10.62□□□□□ -0.71
CAPN1-216ENST00000528739 SDHCQ99643 169 aaPredicted RBP10.62□□□□□ -0.71
CAPN1-216ENST00000528739 PBDC1Q9BVG4 233 aa10.62□□□□□ -0.71
CAPN1-216ENST00000528739 MS4A6AQ9H2W1 248 aa10.62□□□□□ -0.71
CAPN1-216ENST00000528739 VSIRQ9H7M9 311 aa10.62□□□□□ -0.71
CAPN1-216ENST00000528739 EDA2RQ9HAV5 297 aa10.62□□□□□ -0.71
CAPN1-216ENST00000528739 FAM90A26D6RGX4 464 aa10.61□□□□□ -0.71
CAPN1-216ENST00000528739 SYNGR2O43760 224 aa10.61□□□□□ -0.71
CAPN1-216ENST00000528739 PITX3O75364 302 aa10.61□□□□□ -0.71
CAPN1-216ENST00000528739 ADAP1O75689 374 aa10.61□□□□□ -0.71
CAPN1-216ENST00000528739 HNRNPCP07910 306 aaKnown RBP eCLIP10.61□□□□□ -0.71
CAPN1-216ENST00000528739 ATP5IP56385 69 aaPredicted RBP10.61□□□□□ -0.71
CAPN1-216ENST00000528739 YPEL3P61236 119 aaPredicted RBP10.61□□□□□ -0.71
CAPN1-216ENST00000528739 ZNF124Q15973 351 aa10.61□□□□□ -0.71
CAPN1-216ENST00000528739 LYG2Q86SG7 212 aa10.61□□□□□ -0.71
CAPN1-216ENST00000528739 SCGB1D2O95969 90 aa10.6□□□□□ -0.71
CAPN1-216ENST00000528739 TOMM40O96008 361 aa10.6□□□□□ -0.71
CAPN1-216ENST00000528739 CRYBB3P26998 211 aa10.6□□□□□ -0.71
CAPN1-216ENST00000528739 GPX4P36969 197 aaPredicted RBP10.6□□□□□ -0.71
CAPN1-216ENST00000528739 DEFB131AP59861 70 aa10.6□□□□□ -0.71
CAPN1-216ENST00000528739 DHRS2Q13268 280 aa10.6□□□□□ -0.71
CAPN1-216ENST00000528739 DEFB135Q30KP9 77 aa10.6□□□□□ -0.71
CAPN1-216ENST00000528739 SPANXN5Q5MJ07 72 aa10.6□□□□□ -0.71
CAPN1-216ENST00000528739 LEMD1Q68G75 181 aa10.6□□□□□ -0.71
CAPN1-216ENST00000528739 MAP6D1Q9H9H5 199 aa10.6□□□□□ -0.71
CAPN1-216ENST00000528739 H3BP45 60 aa10.59□□□□□ -0.71
CAPN1-216ENST00000528739 UBE2CO00762 179 aa10.59□□□□□ -0.71
CAPN1-216ENST00000528739 LYRM1O43325 122 aa10.59□□□□□ -0.71
CAPN1-216ENST00000528739 SPRY2O43597 315 aa10.59□□□□□ -0.71
CAPN1-216ENST00000528739 FABP1P07148 127 aa10.59□□□□□ -0.71
CAPN1-216ENST00000528739 PSG1P11464 419 aa10.59□□□□□ -0.71
CAPN1-216ENST00000528739 GAMTQ14353 236 aa10.59□□□□□ -0.71
CAPN1-216ENST00000528739 CNPY1Q3B7I2 92 aa10.59□□□□□ -0.71
CAPN1-216ENST00000528739 OR51G1Q8NGK1 321 aa10.59□□□□□ -0.71
CAPN1-216ENST00000528739 IL17DQ8TAD2 202 aa10.59□□□□□ -0.71
CAPN1-216ENST00000528739 PPP1R14BQ96C90 147 aa10.59□□□□□ -0.71
CAPN1-216ENST00000528739 OVOL2Q9BRP0 275 aa10.59□□□□□ -0.71
CAPN1-216ENST00000528739 GSKIPQ9P0R6 139 aa10.59□□□□□ -0.71
CAPN1-216ENST00000528739 PFDN2Q9UHV9 154 aa10.59□□□□□ -0.71
CAPN1-216ENST00000528739 HELTA6NFD8 242 aa10.58□□□□□ -0.72
CAPN1-216ENST00000528739 NKX2-1P43699 371 aaPredicted RBP10.58□□□□□ -0.72
CAPN1-216ENST00000528739 LYZP61626 148 aa10.58□□□□□ -0.72
CAPN1-216ENST00000528739 POLR2GP62487 172 aaKnown RBP eCLIP10.58□□□□□ -0.72
CAPN1-216ENST00000528739 OR2F1Q13607 317 aa10.58□□□□□ -0.72
CAPN1-216ENST00000528739 USF2Q15853 346 aaPredicted RBP10.58□□□□□ -0.72
CAPN1-216ENST00000528739 STHQ8IWL8 128 aa10.58□□□□□ -0.72
CAPN1-216ENST00000528739 CSTL1Q9H114 145 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms