RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, human

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GSDMD-208	ENST00000528475	ZNF292	O60281	2723 aa		18.83	■□□□□ 0.61
GSDMD-208	ENST00000528475		A0A1W2PPI3	338 aa		18.83	■□□□□ 0.6
GSDMD-208	ENST00000528475	APCS	P02743	223 aa		18.83	■□□□□ 0.6
GSDMD-208	ENST00000528475	SRI	P30626	198 aa		18.83	■□□□□ 0.6
GSDMD-208	ENST00000528475	TMEM155	Q4W5P6	130 aa		18.83	■□□□□ 0.6
GSDMD-208	ENST00000528475	MRPL36	Q9P0J6	103 aa	Known RBP	18.83	■□□□□ 0.6
GSDMD-208	ENST00000528475	TBL2	Q9Y4P3	447 aa	Known RBP	18.83	■□□□□ 0.6
GSDMD-208	ENST00000528475	FAM168A	Q92567	244 aa		18.82	■□□□□ 0.6
GSDMD-208	ENST00000528475	CCL17	Q92583	94 aa		18.82	■□□□□ 0.6
GSDMD-208	ENST00000528475	SMIM12	Q96EX1	92 aa		18.82	■□□□□ 0.6
GSDMD-208	ENST00000528475	NRN1	Q9NPD7	142 aa		18.82	■□□□□ 0.6
GSDMD-208	ENST00000528475	ICE1	Q9Y2F5	2266 aa		18.82	■□□□□ 0.6
GSDMD-208	ENST00000528475	NBEA	Q8NFP9	2946 aa		18.82	■□□□□ 0.6
GSDMD-208	ENST00000528475	VSTM5	A8MXK1	200 aa		18.81	■□□□□ 0.6
GSDMD-208	ENST00000528475	ZNF705A	Q6ZN79	300 aa	Predicted RBP	18.81	■□□□□ 0.6
GSDMD-208	ENST00000528475	NHLRC2	Q8NBF2	726 aa		18.81	■□□□□ 0.6
GSDMD-208	ENST00000528475	RCHY1	Q96PM5	261 aa		18.81	■□□□□ 0.6
GSDMD-208	ENST00000528475	MRPL27	Q9P0M9	148 aa	Known RBP	18.81	■□□□□ 0.6
GSDMD-208	ENST00000528475	RNF114	Q9Y508	228 aa		18.81	■□□□□ 0.6
GSDMD-208	ENST00000528475	CNOT1	A5YKK6	2376 aa	Known RBP	18.81	■□□□□ 0.6
GSDMD-208	ENST00000528475	SLC25A17	O43808	307 aa		18.81	■□□□□ 0.6
GSDMD-208	ENST00000528475	ZNF324	O75467	553 aa	Predicted RBP	18.81	■□□□□ 0.6
GSDMD-208	ENST00000528475	AMT	P48728	403 aa		18.81	■□□□□ 0.6
GSDMD-208	ENST00000528475	TBR1	Q16650	682 aa		18.81	■□□□□ 0.6
GSDMD-208	ENST00000528475	LINC00305	Q7Z4B0	112 aa		18.81	■□□□□ 0.6
GSDMD-208	ENST00000528475	PERP	Q96FX8	193 aa		18.81	■□□□□ 0.6
GSDMD-208	ENST00000528475	C7orf69	Q9H7B7	122 aa		18.81	■□□□□ 0.6
GSDMD-208	ENST00000528475	TEX45	Q8NA69	505 aa		18.8	■□□□□ 0.6
GSDMD-208	ENST00000528475	NUDT10	Q8NFP7	164 aa		18.8	■□□□□ 0.6
GSDMD-208	ENST00000528475	OR4B1	Q8NGF8	309 aa		18.8	■□□□□ 0.6
GSDMD-208	ENST00000528475	RNASE6	Q93091	150 aa	Known RBP	18.8	■□□□□ 0.6
GSDMD-208	ENST00000528475	NUDT11	Q96G61	164 aa		18.8	■□□□□ 0.6
GSDMD-208	ENST00000528475	TRGV9	Q99603	122 aa		18.8	■□□□□ 0.6
GSDMD-208	ENST00000528475	IGLC7	A0M8Q6	106 aa		18.8	■□□□□ 0.6
GSDMD-208	ENST00000528475	CA1	P00915	261 aa	Predicted RBP	18.8	■□□□□ 0.6
GSDMD-208	ENST00000528475	FAM103A1	Q9BTL3	118 aa	Known RBP	18.8	■□□□□ 0.6
GSDMD-208	ENST00000528475	TPSG1	Q9NRR2	321 aa		18.8	■□□□□ 0.6
GSDMD-208	ENST00000528475	PAM16	Q9Y3D7	125 aa		18.8	■□□□□ 0.6
GSDMD-208	ENST00000528475	DMXL1	Q9Y485	3027 aa		18.79	■□□□□ 0.6
GSDMD-208	ENST00000528475	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	18.79	■□□□□ 0.6
GSDMD-208	ENST00000528475	IGHV1-8	P0DP01	117 aa		18.79	■□□□□ 0.6
GSDMD-208	ENST00000528475	PAX2	Q02962	417 aa		18.79	■□□□□ 0.6
GSDMD-208	ENST00000528475	TNFRSF19	Q9NS68	423 aa		18.79	■□□□□ 0.6
GSDMD-208	ENST00000528475	KLF12	Q9Y4X4	402 aa		18.79	■□□□□ 0.6
GSDMD-208	ENST00000528475	C22orf46	C9J442	243 aa		18.78	■□□□□ 0.6
GSDMD-208	ENST00000528475	DIRC3	C9JPN6	131 aa		18.78	■□□□□ 0.6
GSDMD-208	ENST00000528475	KLK10	O43240	276 aa		18.78	■□□□□ 0.6
GSDMD-208	ENST00000528475	KRTDAP	P60985	99 aa		18.78	■□□□□ 0.6
GSDMD-208	ENST00000528475	SSBP3	Q9BWW4	388 aa	Predicted RBP	18.78	■□□□□ 0.6
GSDMD-208	ENST00000528475	EPDR1	Q9UM22	224 aa		18.78	■□□□□ 0.6
GSDMD-208	ENST00000528475	IGHV3-48	P01763	117 aa		18.78	■□□□□ 0.6
GSDMD-208	ENST00000528475	HIST1H1E	P10412	219 aa	Known RBP	18.78	■□□□□ 0.6
GSDMD-208	ENST00000528475	FOSL1	P15407	271 aa		18.78	■□□□□ 0.6
GSDMD-208	ENST00000528475	SLA	Q13239	276 aa		18.78	■□□□□ 0.6
GSDMD-208	ENST00000528475	NUP35	Q8NFH5	326 aa		18.78	■□□□□ 0.6
GSDMD-208	ENST00000528475	TNFRSF14	Q92956	283 aa		18.78	■□□□□ 0.6
GSDMD-208	ENST00000528475	RITA1	Q96K30	269 aa		18.78	■□□□□ 0.6
GSDMD-208	ENST00000528475	ATG101	Q9BSB4	218 aa		18.78	■□□□□ 0.6
GSDMD-208	ENST00000528475	TRAV34	A0A0B4J273	112 aa		18.77	■□□□□ 0.6
GSDMD-208	ENST00000528475	C11orf42	Q8N5U0	333 aa		18.77	■□□□□ 0.6
GSDMD-208	ENST00000528475	TSKU	Q8WUA8	353 aa		18.77	■□□□□ 0.6
GSDMD-208	ENST00000528475	TMEM68	Q96MH6	324 aa		18.77	■□□□□ 0.6
GSDMD-208	ENST00000528475	TMEM133	Q9H2Q1	129 aa		18.77	■□□□□ 0.6
GSDMD-208	ENST00000528475	CRYGB	P07316	175 aa		18.77	■□□□□ 0.59
GSDMD-208	ENST00000528475	C19orf35	Q6ZS72	473 aa		18.77	■□□□□ 0.59
GSDMD-208	ENST00000528475	NIT1	Q86X76	327 aa		18.77	■□□□□ 0.59
GSDMD-208	ENST00000528475	TMEM116	Q8NCL8	245 aa		18.77	■□□□□ 0.59
GSDMD-208	ENST00000528475	C18orf32	Q8TCD1	76 aa		18.77	■□□□□ 0.59
GSDMD-208	ENST00000528475	PMCH	P20382	165 aa		18.76	■□□□□ 0.59
GSDMD-208	ENST00000528475	PRRX1	P54821	245 aa		18.76	■□□□□ 0.59
GSDMD-208	ENST00000528475	KLF5	Q13887	457 aa	Predicted RBP	18.76	■□□□□ 0.59
GSDMD-208	ENST00000528475	ATP5L2	Q7Z4Y8	100 aa		18.76	■□□□□ 0.59
GSDMD-208	ENST00000528475	C22orf15	Q8WYQ4	148 aa		18.76	■□□□□ 0.59
GSDMD-208	ENST00000528475	ZFHX4	Q86UP3	3567 aa		18.76	■□□□□ 0.59
GSDMD-208	ENST00000528475	OR2J3	O76001	311 aa		18.75	■□□□□ 0.59
GSDMD-208	ENST00000528475	CTRL	P40313	264 aa		18.75	■□□□□ 0.59
GSDMD-208	ENST00000528475	RPL27A	P46776	148 aa	Known RBP	18.75	■□□□□ 0.59
GSDMD-208	ENST00000528475	MFAP2	P55001	183 aa		18.75	■□□□□ 0.59
GSDMD-208	ENST00000528475	UBE2G1	P62253	170 aa		18.75	■□□□□ 0.59
GSDMD-208	ENST00000528475	MUC6	Q6W4X9	2439 aa		18.75	■□□□□ 0.59
GSDMD-208	ENST00000528475	RIF1	Q5UIP0	2472 aa	Known RBP	18.75	■□□□□ 0.59
GSDMD-208	ENST00000528475	PLP1	P60201	277 aa		18.75	■□□□□ 0.59
GSDMD-208	ENST00000528475	SPACA3	Q8IXA5	215 aa		18.75	■□□□□ 0.59
GSDMD-208	ENST00000528475	CORT	O00230	105 aa		18.74	■□□□□ 0.59
GSDMD-208	ENST00000528475	MOS	P00540	346 aa		18.74	■□□□□ 0.59
GSDMD-208	ENST00000528475	SLC25A5	P05141	298 aa	Known RBP	18.74	■□□□□ 0.59
GSDMD-208	ENST00000528475	CA7	P43166	264 aa		18.74	■□□□□ 0.59
GSDMD-208	ENST00000528475	GNG5	P63218	68 aa		18.74	■□□□□ 0.59
GSDMD-208	ENST00000528475	GDF5OS	Q5U4N7	250 aa		18.74	■□□□□ 0.59
GSDMD-208	ENST00000528475	ZNF841	Q6ZN19	808 aa		18.74	■□□□□ 0.59
GSDMD-208	ENST00000528475	OR1B1	Q8NGR6	318 aa		18.74	■□□□□ 0.59
GSDMD-208	ENST00000528475	ENSA	O43768	121 aa	Known RBP	18.73	■□□□□ 0.59
GSDMD-208	ENST00000528475	PLAU	P00749	431 aa		18.73	■□□□□ 0.59
GSDMD-208	ENST00000528475	ORM2	P19652	201 aa		18.73	■□□□□ 0.59
GSDMD-208	ENST00000528475	GPR82	Q96P67	336 aa		18.73	■□□□□ 0.59
GSDMD-208	ENST00000528475	MLST8	Q9BVC4	326 aa		18.73	■□□□□ 0.59
GSDMD-208	ENST00000528475	DYNLRB1	Q9NP97	96 aa		18.73	■□□□□ 0.59
GSDMD-208	ENST00000528475	ZNF835	Q9Y2P0	537 aa		18.73	■□□□□ 0.59
GSDMD-208	ENST00000528475	CUL9	Q8IWT3	2517 aa		18.73	■□□□□ 0.59
GSDMD-208	ENST00000528475	PGP	A6NDG6	321 aa		18.73	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms