RNA–Protein interactions for RNA: ENST00000528281.5

CNKSR1-212, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 3

Gene CNKSR1, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-212ENST00000528281 ETFRF1Q6IPR1 90 aa13.15□□□□□ -0.3
CNKSR1-212ENST00000528281 PRSS54Q6PEW0 395 aa13.15□□□□□ -0.3
CNKSR1-212ENST00000528281 LYZL2Q7Z4W2 148 aa13.15□□□□□ -0.3
CNKSR1-212ENST00000528281 OR1S2Q8NGQ3 325 aa13.15□□□□□ -0.3
CNKSR1-212ENST00000528281 DEDD2Q8WXF8 326 aa13.15□□□□□ -0.3
CNKSR1-212ENST00000528281 MS4A6AQ9H2W1 248 aa13.15□□□□□ -0.3
CNKSR1-212ENST00000528281 IGHV3-66A0A0C4DH42 116 aa13.14□□□□□ -0.31
CNKSR1-212ENST00000528281 DNASE2O00115 360 aaPredicted RBP13.14□□□□□ -0.31
CNKSR1-212ENST00000528281 NXPH3O95157 252 aa13.14□□□□□ -0.31
CNKSR1-212ENST00000528281 NPY1RP25929 384 aa13.14□□□□□ -0.31
CNKSR1-212ENST00000528281 RPL11P62913 178 aaKnown RBP13.14□□□□□ -0.31
CNKSR1-212ENST00000528281 TNFRSF9Q07011 255 aa13.14□□□□□ -0.31
CNKSR1-212ENST00000528281 ZNF79Q15937 498 aa13.14□□□□□ -0.31
CNKSR1-212ENST00000528281 TMEM170AQ8WVE7 144 aa13.14□□□□□ -0.31
CNKSR1-212ENST00000528281 RNF183Q96D59 192 aa13.14□□□□□ -0.31
CNKSR1-212ENST00000528281 HSPB7Q9UBY9 170 aa13.14□□□□□ -0.31
CNKSR1-212ENST00000528281 U3KQ87 197 aa13.14□□□□□ -0.31
CNKSR1-212ENST00000528281 IGLC1P0CG04 106 aa13.13□□□□□ -0.31
CNKSR1-212ENST00000528281 RND2P52198 227 aa13.13□□□□□ -0.31
CNKSR1-212ENST00000528281 YPEL3P61236 119 aaPredicted RBP13.13□□□□□ -0.31
CNKSR1-212ENST00000528281 ZNF124Q15973 351 aa13.13□□□□□ -0.31
CNKSR1-212ENST00000528281 TMEM128Q5BJH2 165 aa13.13□□□□□ -0.31
CNKSR1-212ENST00000528281 NARS2Q96I59 477 aaKnown RBP13.13□□□□□ -0.31
CNKSR1-212ENST00000528281 RBM38Q9H0Z9 239 aaKnown RBP13.13□□□□□ -0.31
CNKSR1-212ENST00000528281 CSTL1Q9H114 145 aa13.13□□□□□ -0.31
CNKSR1-212ENST00000528281 DUXBA0A1W2PPF3 345 aa13.12□□□□□ -0.31
CNKSR1-212ENST00000528281 ZNF701M0R085 212 aaPredicted RBP13.12□□□□□ -0.31
CNKSR1-212ENST00000528281 IFNA10P01566 189 aa13.12□□□□□ -0.31
CNKSR1-212ENST00000528281 OR10J1P30954 320 aa13.12□□□□□ -0.31
CNKSR1-212ENST00000528281 TMED4Q7Z7H5 227 aa13.12□□□□□ -0.31
CNKSR1-212ENST00000528281 LYG2Q86SG7 212 aa13.12□□□□□ -0.31
CNKSR1-212ENST00000528281 CCDC190Q86UF4 302 aa13.12□□□□□ -0.31
CNKSR1-212ENST00000528281 DTD1Q8TEA8 209 aa13.12□□□□□ -0.31
CNKSR1-212ENST00000528281 Q8WTZ3 238 aa13.12□□□□□ -0.31
CNKSR1-212ENST00000528281 SLC25A21Q9BQT8 299 aaPredicted RBP13.12□□□□□ -0.31
CNKSR1-212ENST00000528281 A0A0J9YWU9 116 aa13.11□□□□□ -0.31
CNKSR1-212ENST00000528281 MPTX1A8MV57 137 aa13.11□□□□□ -0.31
CNKSR1-212ENST00000528281 P2RY1P47900 373 aa13.11□□□□□ -0.31
CNKSR1-212ENST00000528281 ATP5IP56385 69 aaPredicted RBP13.11□□□□□ -0.31
CNKSR1-212ENST00000528281 GRAMD2BQ96HH9 432 aa13.11□□□□□ -0.31
CNKSR1-212ENST00000528281 LYSTQ99698 3801 aa13.11□□□□□ -0.31
CNKSR1-212ENST00000528281 RBKSQ9H477 322 aa13.11□□□□□ -0.31
CNKSR1-212ENST00000528281 RABAC1Q9UI14 185 aa13.11□□□□□ -0.31
CNKSR1-212ENST00000528281 U3KQE9 123 aa13.11□□□□□ -0.31
CNKSR1-212ENST00000528281 JTBO76095 146 aa13.1□□□□□ -0.31
CNKSR1-212ENST00000528281 ATF4P18848 351 aaPredicted RBP13.1□□□□□ -0.31
CNKSR1-212ENST00000528281 DEFB131AP59861 70 aa13.1□□□□□ -0.31
CNKSR1-212ENST00000528281 RBMS2Q15434 407 aaKnown RBP13.1□□□□□ -0.31
CNKSR1-212ENST00000528281 LRTM2Q8N967 370 aa13.1□□□□□ -0.31
CNKSR1-212ENST00000528281 OR1S1Q8NH92 325 aa13.1□□□□□ -0.31
CNKSR1-212ENST00000528281 NPIPB3Q92617 1050 aa13.1□□□□□ -0.31
CNKSR1-212ENST00000528281 HNRNPCP07910 306 aaKnown RBP eCLIP13.09□□□□□ -0.31
CNKSR1-212ENST00000528281 EIF2B2P49770 351 aaKnown RBP13.09□□□□□ -0.31
CNKSR1-212ENST00000528281 SPANXN2Q5MJ10 180 aa13.09□□□□□ -0.31
CNKSR1-212ENST00000528281 FAM24BQ8N5W8 94 aa13.09□□□□□ -0.31
CNKSR1-212ENST00000528281 STXBP6Q8NFX7 210 aa13.09□□□□□ -0.31
CNKSR1-212ENST00000528281 GATAD1Q8WUU5 269 aa13.09□□□□□ -0.31
CNKSR1-212ENST00000528281 ACY3Q96HD9 319 aa13.09□□□□□ -0.31
CNKSR1-212ENST00000528281 K7EQG2 157 aa13.08□□□□□ -0.32
CNKSR1-212ENST00000528281 PITX3O75364 302 aa13.08□□□□□ -0.32
CNKSR1-212ENST00000528281 TOMM40O96008 361 aa13.08□□□□□ -0.32
CNKSR1-212ENST00000528281 IL4P05112 153 aa13.08□□□□□ -0.32
CNKSR1-212ENST00000528281 SLC25A6P12236 298 aa13.08□□□□□ -0.32
CNKSR1-212ENST00000528281 VAMP1P23763 118 aa13.08□□□□□ -0.32
CNKSR1-212ENST00000528281 LEMD1Q68G75 181 aa13.08□□□□□ -0.32
CNKSR1-212ENST00000528281 TMEM217Q8N7C4 229 aa13.08□□□□□ -0.32
CNKSR1-212ENST00000528281 RYR2Q92736 4967 aa13.08□□□□□ -0.32
CNKSR1-212ENST00000528281 HELTA6NFD8 242 aa13.07□□□□□ -0.32
CNKSR1-212ENST00000528281 SFT2D2O95562 160 aa13.07□□□□□ -0.32
CNKSR1-212ENST00000528281 IFNA4P05014 189 aa13.07□□□□□ -0.32
CNKSR1-212ENST00000528281 RD3LP0DJH9 198 aa13.07□□□□□ -0.32
CNKSR1-212ENST00000528281 GPX4P36969 197 aaPredicted RBP13.07□□□□□ -0.32
CNKSR1-212ENST00000528281 AP2S1P53680 142 aaPredicted RBP13.07□□□□□ -0.32
CNKSR1-212ENST00000528281 EWSR1Q01844 656 aaKnown RBP eCLIP13.07□□□□□ -0.32
CNKSR1-212ENST00000528281 C16orf54Q6UWD8 224 aa13.07□□□□□ -0.32
CNKSR1-212ENST00000528281 DCANP1Q8TF63 244 aa13.07□□□□□ -0.32
CNKSR1-212ENST00000528281 SRRQ9GZT4 340 aa13.07□□□□□ -0.32
CNKSR1-212ENST00000528281 TMED3Q9Y3Q3 217 aa13.07□□□□□ -0.32
CNKSR1-212ENST00000528281 SACSQ9NZJ4 4579 aa13.07□□□□□ -0.32
CNKSR1-212ENST00000528281 FAM90A26D6RGX4 464 aa13.06□□□□□ -0.32
CNKSR1-212ENST00000528281 PPP1R1AQ13522 171 aa13.06□□□□□ -0.32
CNKSR1-212ENST00000528281 USF2Q15853 346 aaPredicted RBP13.06□□□□□ -0.32
CNKSR1-212ENST00000528281 STHQ8IWL8 128 aa13.06□□□□□ -0.32
CNKSR1-212ENST00000528281 CENPSQ8N2Z9 138 aa13.06□□□□□ -0.32
CNKSR1-212ENST00000528281 GLMPQ8WWB7 406 aa13.06□□□□□ -0.32
CNKSR1-212ENST00000528281 RARRES2Q99969 163 aa13.06□□□□□ -0.32
CNKSR1-212ENST00000528281 CXorf65A6NEN9 183 aa13.05□□□□□ -0.32
CNKSR1-212ENST00000528281 MED6O75586 246 aa13.05□□□□□ -0.32
CNKSR1-212ENST00000528281 CA1P00915 261 aaPredicted RBP13.05□□□□□ -0.32
CNKSR1-212ENST00000528281 PSG1P11464 419 aa13.05□□□□□ -0.32
CNKSR1-212ENST00000528281 UBE2MP61081 183 aaKnown RBP13.05□□□□□ -0.32
CNKSR1-212ENST00000528281 NUPR2A6NF83 97 aa13.04□□□□□ -0.32
CNKSR1-212ENST00000528281 NAP1L6A6NFF2 107 aa13.04□□□□□ -0.32
CNKSR1-212ENST00000528281 INPP1P49441 399 aa13.04□□□□□ -0.32
CNKSR1-212ENST00000528281 RAB11AP62491 216 aa13.04□□□□□ -0.32
CNKSR1-212ENST00000528281 DHRS2Q13268 280 aa13.04□□□□□ -0.32
CNKSR1-212ENST00000528281 PMS2P11Q13670 270 aa13.04□□□□□ -0.32
CNKSR1-212ENST00000528281 GAMTQ14353 236 aa13.04□□□□□ -0.32
CNKSR1-212ENST00000528281 OR51G1Q8NGK1 321 aa13.04□□□□□ -0.32
CNKSR1-212ENST00000528281 SLC35E1Q96K37 410 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms