RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 NPPCP23582 126 aa24.51■■□□□ 1.51
SSSCA1-205ENST00000527920 CRYBB3P26998 211 aa24.51■■□□□ 1.51
SSSCA1-205ENST00000527920 UBE2MP61081 183 aaKnown RBP24.51■■□□□ 1.51
SSSCA1-205ENST00000527920 KIR2DL5AQ8N109 375 aa24.51■■□□□ 1.51
SSSCA1-205ENST00000527920 CENPSQ8N2Z9 138 aa24.51■■□□□ 1.51
SSSCA1-205ENST00000527920 OR1S1Q8NH92 325 aa24.51■■□□□ 1.51
SSSCA1-205ENST00000527920 KIR2DL5BQ8NHK3 375 aa24.51■■□□□ 1.51
SSSCA1-205ENST00000527920 METTL26Q96S19 204 aa24.51■■□□□ 1.51
SSSCA1-205ENST00000527920 TRAV2A0A0B4J234 112 aa24.5■■□□□ 1.51
SSSCA1-205ENST00000527920 SFT2D2O95562 160 aa24.5■■□□□ 1.51
SSSCA1-205ENST00000527920 IFNA10P01566 189 aa24.5■■□□□ 1.51
SSSCA1-205ENST00000527920 APOHP02749 345 aaPredicted RBP24.5■■□□□ 1.51
SSSCA1-205ENST00000527920 YPEL3P61236 119 aaPredicted RBP24.5■■□□□ 1.51
SSSCA1-205ENST00000527920 TIGITQ495A1 244 aa24.5■■□□□ 1.51
SSSCA1-205ENST00000527920 TRIQKQ629K1 86 aa24.5■■□□□ 1.51
SSSCA1-205ENST00000527920 TMED3Q9Y3Q3 217 aa24.5■■□□□ 1.51
SSSCA1-205ENST00000527920 UBE2CO00762 179 aa24.49■■□□□ 1.51
SSSCA1-205ENST00000527920 OR10J1P30954 320 aa24.49■■□□□ 1.51
SSSCA1-205ENST00000527920 INPP1P49441 399 aa24.49■■□□□ 1.51
SSSCA1-205ENST00000527920 PPP1R1AQ13522 171 aa24.49■■□□□ 1.51
SSSCA1-205ENST00000527920 BAK1Q16611 211 aa24.49■■□□□ 1.51
SSSCA1-205ENST00000527920 TP53TG1Q9Y2A0 90 aa24.49■■□□□ 1.51
SSSCA1-205ENST00000527920 Q6ZWC4 215 aa24.48■■□□□ 1.51
SSSCA1-205ENST00000527920 LILRB2Q8N423 598 aa24.48■■□□□ 1.51
SSSCA1-205ENST00000527920 OVOL2Q9BRP0 275 aa24.48■■□□□ 1.51
SSSCA1-205ENST00000527920 FAM90A26D6RGX4 464 aa24.47■■□□□ 1.51
SSSCA1-205ENST00000527920 DFFBO76075 338 aa24.47■■□□□ 1.51
SSSCA1-205ENST00000527920 IL17DQ8TAD2 202 aa24.47■■□□□ 1.51
SSSCA1-205ENST00000527920 NDUFB6O95139 128 aa24.46■■□□□ 1.51
SSSCA1-205ENST00000527920 TFPI2P48307 235 aa24.46■■□□□ 1.51
SSSCA1-205ENST00000527920 Q8WTZ3 238 aa24.46■■□□□ 1.51
SSSCA1-205ENST00000527920 NARS2Q96I59 477 aaKnown RBP24.46■■□□□ 1.51
SSSCA1-205ENST00000527920 SDHCQ99643 169 aaPredicted RBP24.46■■□□□ 1.51
SSSCA1-205ENST00000527920 IGKV3-7A0A075B6H7 116 aa24.45■■□□□ 1.5
SSSCA1-205ENST00000527920 NPIPB3Q92617 1050 aa24.45■■□□□ 1.5
SSSCA1-205ENST00000527920 MS4A6AQ9H2W1 248 aa24.45■■□□□ 1.5
SSSCA1-205ENST00000527920 IGHV3-66A0A0C4DH42 116 aa24.44■■□□□ 1.5
SSSCA1-205ENST00000527920 WFDC3Q8IUB2 231 aa24.44■■□□□ 1.5
SSSCA1-205ENST00000527920 GBGT1Q8N5D6 347 aa24.44■■□□□ 1.5
SSSCA1-205ENST00000527920 C7orf50Q9BRJ6 194 aaKnown RBP24.44■■□□□ 1.5
SSSCA1-205ENST00000527920 MAP6D1Q9H9H5 199 aa24.44■■□□□ 1.5
SSSCA1-205ENST00000527920 U3KQE9 123 aa24.44■■□□□ 1.5
SSSCA1-205ENST00000527920 RYR3Q15413 4870 aa24.44■■□□□ 1.5
SSSCA1-205ENST00000527920 ZFAND6Q6FIF0 208 aa24.43■■□□□ 1.5
SSSCA1-205ENST00000527920 APRG1Q8IVJ8 170 aa24.43■■□□□ 1.5
SSSCA1-205ENST00000527920 ACY3Q96HD9 319 aa24.43■■□□□ 1.5
SSSCA1-205ENST00000527920 GRAMD2BQ96HH9 432 aa24.43■■□□□ 1.5
SSSCA1-205ENST00000527920 IFNA4P05014 189 aa24.42■■□□□ 1.5
SSSCA1-205ENST00000527920 GPX4P36969 197 aaPredicted RBP24.42■■□□□ 1.5
SSSCA1-205ENST00000527920 STPG3Q8N7X2 389 aa24.42■■□□□ 1.5
SSSCA1-205ENST00000527920 DNASE2O00115 360 aaPredicted RBP24.41■■□□□ 1.5
SSSCA1-205ENST00000527920 MED6O75586 246 aa24.41■■□□□ 1.5
SSSCA1-205ENST00000527920 TOMM40O96008 361 aa24.41■■□□□ 1.5
SSSCA1-205ENST00000527920 P2RY1P47900 373 aa24.41■■□□□ 1.5
SSSCA1-205ENST00000527920 CENPXA8MT69 81 aa24.4■■□□□ 1.5
SSSCA1-205ENST00000527920 RPL11P62913 178 aaKnown RBP24.4■■□□□ 1.5
SSSCA1-205ENST00000527920 CIB3Q96Q77 187 aaPredicted RBP24.4■■□□□ 1.5
SSSCA1-205ENST00000527920 C9orf170A2RU37 121 aa24.39■■□□□ 1.49
SSSCA1-205ENST00000527920 HNRNPCP07910 306 aaKnown RBP eCLIP24.39■■□□□ 1.49
SSSCA1-205ENST00000527920 RD3LP0DJH9 198 aa24.39■■□□□ 1.49
SSSCA1-205ENST00000527920 CSMD3Q7Z407 3707 aa24.38■■□□□ 1.49
SSSCA1-205ENST00000527920 SPRY2O43597 315 aa24.38■■□□□ 1.49
SSSCA1-205ENST00000527920 IL7P13232 177 aa24.38■■□□□ 1.49
SSSCA1-205ENST00000527920 RPL35AP18077 110 aaKnown RBP24.38■■□□□ 1.49
SSSCA1-205ENST00000527920 EIF2B2P49770 351 aaKnown RBP24.38■■□□□ 1.49
SSSCA1-205ENST00000527920 GGNBP1Q5YKI7 109 aa24.38■■□□□ 1.49
SSSCA1-205ENST00000527920 IL4P05112 153 aa24.37■■□□□ 1.49
SSSCA1-205ENST00000527920 HOXB5P09067 269 aa24.37■■□□□ 1.49
SSSCA1-205ENST00000527920 BTCP35070 178 aa24.37■■□□□ 1.49
SSSCA1-205ENST00000527920 RAB11AP62491 216 aa24.37■■□□□ 1.49
SSSCA1-205ENST00000527920 USF2Q15853 346 aaPredicted RBP24.37■■□□□ 1.49
SSSCA1-205ENST00000527920 DEFB135Q30KP9 77 aa24.37■■□□□ 1.49
SSSCA1-205ENST00000527920 RNF183Q96D59 192 aa24.37■■□□□ 1.49
SSSCA1-205ENST00000527920 STARD9Q9P2P6 4700 aa24.37■■□□□ 1.49
SSSCA1-205ENST00000527920 HELTA6NFD8 242 aa24.36■■□□□ 1.49
SSSCA1-205ENST00000527920 GAMTQ14353 236 aa24.36■■□□□ 1.49
SSSCA1-205ENST00000527920 ZNF124Q15973 351 aa24.36■■□□□ 1.49
SSSCA1-205ENST00000527920 CNPY1Q3B7I2 92 aa24.36■■□□□ 1.49
SSSCA1-205ENST00000527920 SLC35E1Q96K37 410 aa24.36■■□□□ 1.49
SSSCA1-205ENST00000527920 RABAC1Q9UI14 185 aa24.36■■□□□ 1.49
SSSCA1-205ENST00000527920 K7EQG2 157 aa24.35■■□□□ 1.49
SSSCA1-205ENST00000527920 SYNGR2O43760 224 aa24.35■■□□□ 1.49
SSSCA1-205ENST00000527920 IAPPP10997 89 aa24.35■■□□□ 1.49
SSSCA1-205ENST00000527920 RPP30P78346 268 aaKnown RBP24.35■■□□□ 1.49
SSSCA1-205ENST00000527920 DHRS2Q13268 280 aa24.35■■□□□ 1.49
SSSCA1-205ENST00000527920 C16orf54Q6UWD8 224 aa24.35■■□□□ 1.49
SSSCA1-205ENST00000527920 COQ8AQ8NI60 647 aa24.35■■□□□ 1.49
SSSCA1-205ENST00000527920 GLMPQ8WWB7 406 aa24.35■■□□□ 1.49
SSSCA1-205ENST00000527920 CSTL1Q9H114 145 aa24.35■■□□□ 1.49
SSSCA1-205ENST00000527920 OR4E1P0C645 316 aa24.34■■□□□ 1.49
SSSCA1-205ENST00000527920 PSG1P11464 419 aa24.34■■□□□ 1.49
SSSCA1-205ENST00000527920 AP2S1P53680 142 aaPredicted RBP24.34■■□□□ 1.49
SSSCA1-205ENST00000527920 LYG2Q86SG7 212 aa24.34■■□□□ 1.49
SSSCA1-205ENST00000527920 STXBP6Q8NFX7 210 aa24.34■■□□□ 1.49
SSSCA1-205ENST00000527920 OR51G1Q8NGK1 321 aa24.34■■□□□ 1.49
SSSCA1-205ENST00000527920 FLVCR2Q9UPI3 526 aa24.34■■□□□ 1.49
SSSCA1-205ENST00000527920 LINC00854A0A1B0GVQ3 168 aa24.33■■□□□ 1.49
SSSCA1-205ENST00000527920 DEFB131AP59861 70 aa24.33■■□□□ 1.49
SSSCA1-205ENST00000527920 FAM24BQ8N5W8 94 aa24.33■■□□□ 1.49
SSSCA1-205ENST00000527920 DCANP1Q8TF63 244 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms