RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 HSPB7Q9UBY9 170 aa11.54□□□□□ -0.56
CAPN1-213ENST00000527897 RYR3Q15413 4870 aa11.54□□□□□ -0.56
CAPN1-213ENST00000527897 TRAV30A0A087WSZ9 112 aa11.53□□□□□ -0.56
CAPN1-213ENST00000527897 IGKV1-17P01599 117 aa11.53□□□□□ -0.56
CAPN1-213ENST00000527897 IFNA4P05014 189 aa11.53□□□□□ -0.56
CAPN1-213ENST00000527897 OR10J1P30954 320 aa11.53□□□□□ -0.56
CAPN1-213ENST00000527897 PPP1R1AQ13522 171 aa11.53□□□□□ -0.56
CAPN1-213ENST00000527897 BAK1Q16611 211 aa11.53□□□□□ -0.56
CAPN1-213ENST00000527897 ETFRF1Q6IPR1 90 aa11.53□□□□□ -0.56
CAPN1-213ENST00000527897 NPIPB3Q92617 1050 aa11.53□□□□□ -0.56
CAPN1-213ENST00000527897 NARS2Q96I59 477 aaKnown RBP11.53□□□□□ -0.56
CAPN1-213ENST00000527897 TMEM231Q9H6L2 316 aa11.53□□□□□ -0.56
CAPN1-213ENST00000527897 RABAC1Q9UI14 185 aa11.53□□□□□ -0.56
CAPN1-213ENST00000527897 PAIP2BQ9ULR5 123 aaKnown RBP11.53□□□□□ -0.56
CAPN1-213ENST00000527897 PIGBOS1A0A0B4J2F0 54 aa11.52□□□□□ -0.57
CAPN1-213ENST00000527897 SFT2D2O95562 160 aa11.52□□□□□ -0.57
CAPN1-213ENST00000527897 HOXB5P09067 269 aa11.52□□□□□ -0.57
CAPN1-213ENST00000527897 IAPPP10997 89 aa11.52□□□□□ -0.57
CAPN1-213ENST00000527897 RBMS2Q15434 407 aaKnown RBP11.52□□□□□ -0.57
CAPN1-213ENST00000527897 DEFB135Q30KP9 77 aa11.52□□□□□ -0.57
CAPN1-213ENST00000527897 FAM90A2PQ658T7 463 aa11.52□□□□□ -0.57
CAPN1-213ENST00000527897 OR1S2Q8NGQ3 325 aa11.52□□□□□ -0.57
CAPN1-213ENST00000527897 Q8WTZ3 238 aa11.52□□□□□ -0.57
CAPN1-213ENST00000527897 DEDD2Q8WXF8 326 aa11.52□□□□□ -0.57
CAPN1-213ENST00000527897 OVOL2Q9BRP0 275 aa11.52□□□□□ -0.57
CAPN1-213ENST00000527897 MS4A6AQ9H2W1 248 aa11.52□□□□□ -0.57
CAPN1-213ENST00000527897 VSIRQ9H7M9 311 aa11.52□□□□□ -0.57
CAPN1-213ENST00000527897 U3KQ87 197 aa11.52□□□□□ -0.57
CAPN1-213ENST00000527897 DUXBA0A1W2PPF3 345 aa11.51□□□□□ -0.57
CAPN1-213ENST00000527897 A0A1W2PS18 150 aa11.51□□□□□ -0.57
CAPN1-213ENST00000527897 CD5P06127 495 aa11.51□□□□□ -0.57
CAPN1-213ENST00000527897 IGLC1P0CG04 106 aa11.51□□□□□ -0.57
CAPN1-213ENST00000527897 STPG3Q8N7X2 389 aa11.51□□□□□ -0.57
CAPN1-213ENST00000527897 STXBP6Q8NFX7 210 aa11.51□□□□□ -0.57
CAPN1-213ENST00000527897 MAP6D1Q9H9H5 199 aa11.51□□□□□ -0.57
CAPN1-213ENST00000527897 STARD9Q9P2P6 4700 aa11.51□□□□□ -0.57
CAPN1-213ENST00000527897 IL4P05112 153 aa11.5□□□□□ -0.57
CAPN1-213ENST00000527897 P2RY1P47900 373 aa11.5□□□□□ -0.57
CAPN1-213ENST00000527897 CMC4P56277 68 aaPredicted RBP11.5□□□□□ -0.57
CAPN1-213ENST00000527897 MAGT1Q9H0U3 335 aa11.5□□□□□ -0.57
CAPN1-213ENST00000527897 FLVCR2Q9UPI3 526 aa11.5□□□□□ -0.57
CAPN1-213ENST00000527897 CSMD3Q7Z407 3707 aa11.5□□□□□ -0.57
CAPN1-213ENST00000527897 NAP1L6A6NFF2 107 aa11.49□□□□□ -0.57
CAPN1-213ENST00000527897 CENPXA8MT69 81 aa11.49□□□□□ -0.57
CAPN1-213ENST00000527897 SPRY2O43597 315 aa11.49□□□□□ -0.57
CAPN1-213ENST00000527897 CRYBB3P26998 211 aa11.49□□□□□ -0.57
CAPN1-213ENST00000527897 DEFB131AP59861 70 aa11.49□□□□□ -0.57
CAPN1-213ENST00000527897 YPEL3P61236 119 aaPredicted RBP11.49□□□□□ -0.57
CAPN1-213ENST00000527897 LEMD1Q68G75 181 aa11.49□□□□□ -0.57
CAPN1-213ENST00000527897 LRTM2Q8N967 370 aa11.49□□□□□ -0.57
CAPN1-213ENST00000527897 GRAMD2BQ96HH9 432 aa11.49□□□□□ -0.57
CAPN1-213ENST00000527897 TMED3Q9Y3Q3 217 aa11.49□□□□□ -0.57
CAPN1-213ENST00000527897 TENM2Q9NT68 2774 aa11.48□□□□□ -0.57
CAPN1-213ENST00000527897 WRBO00258 174 aa11.48□□□□□ -0.57
CAPN1-213ENST00000527897 PITX3O75364 302 aa11.48□□□□□ -0.57
CAPN1-213ENST00000527897 NDUFB6O95139 128 aa11.48□□□□□ -0.57
CAPN1-213ENST00000527897 HNRNPCP07910 306 aaKnown RBP eCLIP11.48□□□□□ -0.57
CAPN1-213ENST00000527897 RD3LP0DJH9 198 aa11.48□□□□□ -0.57
CAPN1-213ENST00000527897 RAB11AP62491 216 aa11.48□□□□□ -0.57
CAPN1-213ENST00000527897 GGNBP1Q5YKI7 109 aa11.48□□□□□ -0.57
CAPN1-213ENST00000527897 FAM24BQ8N5W8 94 aa11.48□□□□□ -0.57
CAPN1-213ENST00000527897 SLC35E1Q96K37 410 aa11.48□□□□□ -0.57
CAPN1-213ENST00000527897 SDHCQ99643 169 aaPredicted RBP11.48□□□□□ -0.57
CAPN1-213ENST00000527897 NDUFA13Q9P0J0 144 aa11.48□□□□□ -0.57
CAPN1-213ENST00000527897 KIR2DL5BA0A0G2JN68 375 aa11.47□□□□□ -0.57
CAPN1-213ENST00000527897 KIR2DL5BA0A0G2JPC4 375 aa11.47□□□□□ -0.57
CAPN1-213ENST00000527897 C9orf170A2RU37 121 aa11.47□□□□□ -0.57
CAPN1-213ENST00000527897 ZFP92A6NM28 416 aa11.47□□□□□ -0.57
CAPN1-213ENST00000527897 UBE2CO00762 179 aa11.47□□□□□ -0.57
CAPN1-213ENST00000527897 MED6O75586 246 aa11.47□□□□□ -0.57
CAPN1-213ENST00000527897 ADAP1O75689 374 aa11.47□□□□□ -0.57
CAPN1-213ENST00000527897 TOMM40O96008 361 aa11.47□□□□□ -0.57
CAPN1-213ENST00000527897 IL7P13232 177 aa11.47□□□□□ -0.57
CAPN1-213ENST00000527897 USF2Q15853 346 aaPredicted RBP11.47□□□□□ -0.57
CAPN1-213ENST00000527897 Q6ZWC4 215 aa11.47□□□□□ -0.57
CAPN1-213ENST00000527897 KIR2DL5AQ8N109 375 aa11.47□□□□□ -0.57
CAPN1-213ENST00000527897 KIR2DL5BQ8NHK3 375 aa11.47□□□□□ -0.57
CAPN1-213ENST00000527897 IL17DQ8TAD2 202 aa11.47□□□□□ -0.57
CAPN1-213ENST00000527897 PBDC1Q9BVG4 233 aa11.47□□□□□ -0.57
CAPN1-213ENST00000527897 DYNC2H1Q8NCM8 4307 aaKnown RBP11.46□□□□□ -0.57
CAPN1-213ENST00000527897 A0A0J9YWU9 116 aa11.46□□□□□ -0.57
CAPN1-213ENST00000527897 FAM90A26D6RGX4 464 aa11.46□□□□□ -0.57
CAPN1-213ENST00000527897 ZNF688P0C7X2 276 aa11.46□□□□□ -0.57
CAPN1-213ENST00000527897 PSG1P11464 419 aa11.46□□□□□ -0.57
CAPN1-213ENST00000527897 SLC25A6P12236 298 aa11.46□□□□□ -0.57
CAPN1-213ENST00000527897 ANXA7P20073 488 aaKnown RBP11.46□□□□□ -0.57
CAPN1-213ENST00000527897 EIF2B2P49770 351 aaKnown RBP11.46□□□□□ -0.57
CAPN1-213ENST00000527897 UBE2MP61081 183 aaKnown RBP11.46□□□□□ -0.57
CAPN1-213ENST00000527897 GAMTQ14353 236 aa11.46□□□□□ -0.57
CAPN1-213ENST00000527897 C4orf46Q504U0 113 aa11.46□□□□□ -0.57
CAPN1-213ENST00000527897 OR51G1Q8NGK1 321 aa11.46□□□□□ -0.57
CAPN1-213ENST00000527897 COQ8AQ8NI60 647 aa11.46□□□□□ -0.57
CAPN1-213ENST00000527897 CSTL1Q9H114 145 aa11.46□□□□□ -0.57
CAPN1-213ENST00000527897 MPTX1A8MV57 137 aa11.45□□□□□ -0.58
CAPN1-213ENST00000527897 H3BP45 60 aa11.45□□□□□ -0.58
CAPN1-213ENST00000527897 SYNGR2O43760 224 aa11.45□□□□□ -0.58
CAPN1-213ENST00000527897 OR4E1P0C645 316 aa11.45□□□□□ -0.58
CAPN1-213ENST00000527897 GPX4P36969 197 aaPredicted RBP11.45□□□□□ -0.58
CAPN1-213ENST00000527897 ATP5IP56385 69 aaPredicted RBP11.45□□□□□ -0.58
CAPN1-213ENST00000527897 RPP30P78346 268 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms