RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 TMEM116Q8NCL8 245 aa13.27□□□□□ -0.29
CCS-204ENST00000526066 KLHL30-AS1Q8NEE0 82 aa13.27□□□□□ -0.29
CCS-204ENST00000526066 OR4X1Q8NH49 305 aa13.27□□□□□ -0.29
CCS-204ENST00000526066 SLC35E1Q96K37 410 aa13.27□□□□□ -0.29
CCS-204ENST00000526066 CCDC140Q96MF4 163 aa13.27□□□□□ -0.29
CCS-204ENST00000526066 HSPB11Q9Y547 144 aa13.27□□□□□ -0.29
CCS-204ENST00000526066 F8W735 103 aaPredicted RBP13.26□□□□□ -0.29
CCS-204ENST00000526066 C3orf84H3BNL1 204 aa13.26□□□□□ -0.29
CCS-204ENST00000526066 I3L521 148 aa13.26□□□□□ -0.29
CCS-204ENST00000526066 IGHV3-11P01762 117 aa13.26□□□□□ -0.29
CCS-204ENST00000526066 NPBWR1P48145 328 aa13.26□□□□□ -0.29
CCS-204ENST00000526066 NHLH2Q02577 135 aa13.26□□□□□ -0.29
CCS-204ENST00000526066 SLC38A11Q08AI6 406 aa13.26□□□□□ -0.29
CCS-204ENST00000526066 ATP6V1FQ16864 119 aa13.26□□□□□ -0.29
CCS-204ENST00000526066 ACSM6Q6P461 480 aa13.26□□□□□ -0.29
CCS-204ENST00000526066 C8orf86Q6ZUL3 223 aa13.26□□□□□ -0.29
CCS-204ENST00000526066 TMEM217Q8N7C4 229 aa13.26□□□□□ -0.29
CCS-204ENST00000526066 OR11H4Q8NGC9 324 aa13.26□□□□□ -0.29
CCS-204ENST00000526066 MRPL36Q9P0J6 103 aaKnown RBP13.26□□□□□ -0.29
CCS-204ENST00000526066 S4R3C0 116 aa13.26□□□□□ -0.29
CCS-204ENST00000526066 RNF222A6NCQ9 220 aa13.25□□□□□ -0.29
CCS-204ENST00000526066 IGHV3-48P01763 117 aa13.25□□□□□ -0.29
CCS-204ENST00000526066 RND2P52198 227 aa13.25□□□□□ -0.29
CCS-204ENST00000526066 CD300CQ08708 224 aa13.25□□□□□ -0.29
CCS-204ENST00000526066 GAMTQ14353 236 aa13.25□□□□□ -0.29
CCS-204ENST00000526066 OR1S2Q8NGQ3 325 aa13.25□□□□□ -0.29
CCS-204ENST00000526066 ZC4H2Q9NQZ6 224 aa13.25□□□□□ -0.29
CCS-204ENST00000526066 PEF1Q9UBV8 284 aaKnown RBP13.25□□□□□ -0.29
CCS-204ENST00000526066 ARPC5O15511 151 aa13.24□□□□□ -0.29
CCS-204ENST00000526066 CLN5O75503 358 aa13.24□□□□□ -0.29
CCS-204ENST00000526066 IGHV3-23P01764 117 aa13.24□□□□□ -0.29
CCS-204ENST00000526066 VWC2Q2TAL6 325 aa13.24□□□□□ -0.29
CCS-204ENST00000526066 Q56UQ5 140 aa13.24□□□□□ -0.29
CCS-204ENST00000526066 SPSB3Q6PJ21 355 aa13.24□□□□□ -0.29
CCS-204ENST00000526066 CLEC19AQ6UXS0 136 aa13.24□□□□□ -0.29
CCS-204ENST00000526066 C18orf65Q6ZTR6 163 aa13.24□□□□□ -0.29
CCS-204ENST00000526066 OR5C1Q8NGR4 320 aa13.24□□□□□ -0.29
CCS-204ENST00000526066 BSCL2Q96G97 398 aaPredicted RBP13.24□□□□□ -0.29
CCS-204ENST00000526066 ACY3Q96HD9 319 aa13.24□□□□□ -0.29
CCS-204ENST00000526066 HYLS1Q96M11 299 aa13.24□□□□□ -0.29
CCS-204ENST00000526066 TMEM147Q9BVK8 224 aa13.24□□□□□ -0.29
CCS-204ENST00000526066 TRAV30A0A087WSZ9 112 aa13.23□□□□□ -0.29
CCS-204ENST00000526066 TGOLN2O43493 480 aa13.23□□□□□ -0.29
CCS-204ENST00000526066 GNG7O60262 68 aa13.23□□□□□ -0.29
CCS-204ENST00000526066 PFDN1O60925 122 aa13.23□□□□□ -0.29
CCS-204ENST00000526066 SCGB2A1O75556 95 aa13.23□□□□□ -0.29
CCS-204ENST00000526066 HSPB1P04792 205 aaKnown RBP13.23□□□□□ -0.29
CCS-204ENST00000526066 CLEC3BP05452 202 aa13.23□□□□□ -0.29
CCS-204ENST00000526066 GPR183P32249 361 aa13.23□□□□□ -0.29
CCS-204ENST00000526066 OR2F1Q13607 317 aa13.23□□□□□ -0.29
CCS-204ENST00000526066 ZNF345Q14585 488 aa13.23□□□□□ -0.29
CCS-204ENST00000526066 TMEM144Q7Z5S9 345 aa13.23□□□□□ -0.29
CCS-204ENST00000526066 LILRB2Q8N423 598 aa13.23□□□□□ -0.29
CCS-204ENST00000526066 NPIPB3Q92617 1050 aa13.23□□□□□ -0.29
CCS-204ENST00000526066 OR5B12Q96R08 314 aa13.23□□□□□ -0.29
CCS-204ENST00000526066 MFFQ9GZY8 342 aa13.23□□□□□ -0.29
CCS-204ENST00000526066 NPVFQ9HCQ7 196 aa13.23□□□□□ -0.29
CCS-204ENST00000526066 UQCC1Q9NVA1 299 aa13.23□□□□□ -0.29
CCS-204ENST00000526066 ANKRD34BA5PLL1 514 aa13.22□□□□□ -0.29
CCS-204ENST00000526066 DFFBO76075 338 aa13.22□□□□□ -0.29
CCS-204ENST00000526066 IGLC1P0CG04 106 aa13.22□□□□□ -0.29
CCS-204ENST00000526066 AKR1C1Q04828 323 aa13.22□□□□□ -0.29
CCS-204ENST00000526066 ZFP69Q49AA0 526 aa13.22□□□□□ -0.29
CCS-204ENST00000526066 THAP8Q8NA92 274 aa13.22□□□□□ -0.29
CCS-204ENST00000526066 UBAC2Q8NBM4 344 aa13.22□□□□□ -0.29
CCS-204ENST00000526066 OR2T8A6NH00 312 aa13.21□□□□□ -0.29
CCS-204ENST00000526066 NUPL2O15504 423 aaKnown RBP13.21□□□□□ -0.29
CCS-204ENST00000526066 TRBV12-3P01733 135 aa13.21□□□□□ -0.29
CCS-204ENST00000526066 CTSGP08311 255 aa13.21□□□□□ -0.29
CCS-204ENST00000526066 ARL3P36405 182 aa13.21□□□□□ -0.29
CCS-204ENST00000526066 C9orf66Q5T8R8 295 aa13.21□□□□□ -0.29
CCS-204ENST00000526066 ATP5SQ99766 215 aa13.21□□□□□ -0.29
CCS-204ENST00000526066 FBXL17Q9UF56 701 aa13.21□□□□□ -0.29
CCS-204ENST00000526066 LSM4Q9Y4Z0 139 aaKnown RBP13.21□□□□□ -0.29
CCS-204ENST00000526066 IGHV4OR15-8A0A075B7B6 117 aa13.2□□□□□ -0.3
CCS-204ENST00000526066 A0A087WW49 117 aa13.2□□□□□ -0.3
CCS-204ENST00000526066 A0A0D9SG52 128 aa13.2□□□□□ -0.3
CCS-204ENST00000526066 SMCO3A2RU48 225 aa13.2□□□□□ -0.3
CCS-204ENST00000526066 CCL24O00175 119 aa13.2□□□□□ -0.3
CCS-204ENST00000526066 BMPR1BO00238 502 aa13.2□□□□□ -0.3
CCS-204ENST00000526066 GGCTO75223 188 aaKnown RBP13.2□□□□□ -0.3
CCS-204ENST00000526066 IGKV1-17P01599 117 aa13.2□□□□□ -0.3
CCS-204ENST00000526066 ZP3P21754 424 aa13.2□□□□□ -0.3
CCS-204ENST00000526066 OR10J1P30954 320 aa13.2□□□□□ -0.3
CCS-204ENST00000526066 ADMP35318 185 aa13.2□□□□□ -0.3
CCS-204ENST00000526066 FHL3Q13643 280 aa13.2□□□□□ -0.3
CCS-204ENST00000526066 CLINT1Q14677 625 aa13.2□□□□□ -0.3
CCS-204ENST00000526066 KCNRGQ8N5I3 272 aa13.2□□□□□ -0.3
CCS-204ENST00000526066 OR1N2Q8NGR9 330 aa13.2□□□□□ -0.3
CCS-204ENST00000526066 TRGV9Q99603 122 aa13.2□□□□□ -0.3
CCS-204ENST00000526066 CHRDL1Q9BU40 450 aa13.2□□□□□ -0.3
CCS-204ENST00000526066 WDR83OSQ9Y284 106 aa13.2□□□□□ -0.3
CCS-204ENST00000526066 IGKV1D-37A0A075B6S9 117 aa13.19□□□□□ -0.3
CCS-204ENST00000526066 IGKV1OR2-108A0A075B7D4 117 aa13.19□□□□□ -0.3
CCS-204ENST00000526066 ZFP92A6NM28 416 aa13.19□□□□□ -0.3
CCS-204ENST00000526066 PPP5D1E7EU14 171 aa13.19□□□□□ -0.3
CCS-204ENST00000526066 LINC01619G3V211 115 aa13.19□□□□□ -0.3
CCS-204ENST00000526066 CXCL2P19875 107 aa13.19□□□□□ -0.3
CCS-204ENST00000526066 AP2S1P53680 142 aaPredicted RBP13.19□□□□□ -0.3
CCS-204ENST00000526066 YPEL3P61236 119 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms