RNA–Protein interactions for RNA: ENST00000526054.5

VPS28-204, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 892 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-204ENST00000526054 CYCSP99999 105 aaKnown RBP7.7□□□□□ -1.18
VPS28-204ENST00000526054 SPANXN5Q5MJ07 72 aa7.7□□□□□ -1.18
VPS28-204ENST00000526054 SLC16A13Q7RTY0 426 aa7.7□□□□□ -1.18
VPS28-204ENST00000526054 HAPLN4Q86UW8 402 aa7.7□□□□□ -1.18
VPS28-204ENST00000526054 TCTE3Q8IZS6 198 aa7.7□□□□□ -1.18
VPS28-204ENST00000526054 OR4X1Q8NH49 305 aa7.7□□□□□ -1.18
VPS28-204ENST00000526054 TMEM170AQ8WVE7 144 aa7.7□□□□□ -1.18
VPS28-204ENST00000526054 ST6GAL2Q96JF0 529 aa7.7□□□□□ -1.18
VPS28-204ENST00000526054 RAB40CQ96S21 281 aa7.7□□□□□ -1.18
VPS28-204ENST00000526054 FNDC4Q9H6D8 234 aaPredicted RBP7.7□□□□□ -1.18
VPS28-204ENST00000526054 STRAPQ9Y3F4 350 aaKnown RBP7.7□□□□□ -1.18
VPS28-204ENST00000526054 STARD9Q9P2P6 4700 aa7.7□□□□□ -1.18
VPS28-204ENST00000526054 DNAH1Q9P2D7 4330 aa7.69□□□□□ -1.18
VPS28-204ENST00000526054 TRAV30A0A087WSZ9 112 aa7.69□□□□□ -1.18
VPS28-204ENST00000526054 IGHV3-35A0A0C4DH35 117 aa7.69□□□□□ -1.18
VPS28-204ENST00000526054 ZNF320A2RRD8 509 aa7.69□□□□□ -1.18
VPS28-204ENST00000526054 C15orf62A8K5M9 175 aa7.69□□□□□ -1.18
VPS28-204ENST00000526054 A8MWP6 167 aa7.69□□□□□ -1.18
VPS28-204ENST00000526054 H3BP45 60 aa7.69□□□□□ -1.18
VPS28-204ENST00000526054 L7N2F9 121 aa7.69□□□□□ -1.18
VPS28-204ENST00000526054 NDUFA4O00483 81 aa7.69□□□□□ -1.18
VPS28-204ENST00000526054 CLN5O75503 358 aa7.69□□□□□ -1.18
VPS28-204ENST00000526054 CTSGP08311 255 aa7.69□□□□□ -1.18
VPS28-204ENST00000526054 ADMP35318 185 aa7.69□□□□□ -1.18
VPS28-204ENST00000526054 VAMP2P63027 116 aa7.69□□□□□ -1.18
VPS28-204ENST00000526054 TMEM190Q8WZ59 177 aa7.69□□□□□ -1.18
VPS28-204ENST00000526054 SLC35E1Q96K37 410 aa7.69□□□□□ -1.18
VPS28-204ENST00000526054 CHRDL1Q9BU40 450 aa7.69□□□□□ -1.18
VPS28-204ENST00000526054 PSENENQ9NZ42 101 aa7.69□□□□□ -1.18
VPS28-204ENST00000526054 RCL1Q9Y2P8 373 aaKnown RBP7.69□□□□□ -1.18
VPS28-204ENST00000526054 UFC1Q9Y3C8 167 aa7.69□□□□□ -1.18
VPS28-204ENST00000526054 LSM5Q9Y4Y9 91 aaKnown RBP7.69□□□□□ -1.18
VPS28-204ENST00000526054 C2orf70A6NJV1 201 aa7.68□□□□□ -1.18
VPS28-204ENST00000526054 TSC22D2O75157 780 aa7.68□□□□□ -1.18
VPS28-204ENST00000526054 MBPP02686 304 aaPredicted RBP7.68□□□□□ -1.18
VPS28-204ENST00000526054 HNRNPCP07910 306 aaKnown RBP eCLIP7.68□□□□□ -1.18
VPS28-204ENST00000526054 IGHV4-30-4P0DP06 118 aa7.68□□□□□ -1.18
VPS28-204ENST00000526054 PVALBP20472 110 aaPredicted RBP7.68□□□□□ -1.18
VPS28-204ENST00000526054 GPX4P36969 197 aaPredicted RBP7.68□□□□□ -1.18
VPS28-204ENST00000526054 RND2P52198 227 aa7.68□□□□□ -1.18
VPS28-204ENST00000526054 ELLP55199 621 aaPredicted RBP7.68□□□□□ -1.18
VPS28-204ENST00000526054 TAS2R30P59541 319 aa7.68□□□□□ -1.18
VPS28-204ENST00000526054 S100A10P60903 97 aa7.68□□□□□ -1.18
VPS28-204ENST00000526054 FGL1Q08830 312 aa7.68□□□□□ -1.18
VPS28-204ENST00000526054 ZFP69Q49AA0 526 aa7.68□□□□□ -1.18
VPS28-204ENST00000526054 PRSS54Q6PEW0 395 aa7.68□□□□□ -1.18
VPS28-204ENST00000526054 TMEM116Q8NCL8 245 aa7.68□□□□□ -1.18
VPS28-204ENST00000526054 OR1S2Q8NGQ3 325 aa7.68□□□□□ -1.18
VPS28-204ENST00000526054 OR2T35Q8NGX2 323 aa7.68□□□□□ -1.18
VPS28-204ENST00000526054 DYNLRB2Q8TF09 96 aa7.68□□□□□ -1.18
VPS28-204ENST00000526054 CACNG8Q8WXS5 425 aa7.68□□□□□ -1.18
VPS28-204ENST00000526054 SMIM8Q96KF7 97 aa7.68□□□□□ -1.18
VPS28-204ENST00000526054 CITED4Q96RK1 184 aa7.68□□□□□ -1.18
VPS28-204ENST00000526054 TM2D3Q9BRN9 247 aa7.68□□□□□ -1.18
VPS28-204ENST00000526054 NMES1Q9C002 83 aa7.68□□□□□ -1.18
VPS28-204ENST00000526054 SIGLEC8Q9NYZ4 499 aa7.68□□□□□ -1.18
VPS28-204ENST00000526054 MRPL36Q9P0J6 103 aaKnown RBP7.68□□□□□ -1.18
VPS28-204ENST00000526054 CSMD3Q7Z407 3707 aa7.68□□□□□ -1.18
VPS28-204ENST00000526054 K7EPK0 472 aa7.67□□□□□ -1.18
VPS28-204ENST00000526054 YIF1AO95070 293 aa7.67□□□□□ -1.18
VPS28-204ENST00000526054 TMEM50AO95807 157 aa7.67□□□□□ -1.18
VPS28-204ENST00000526054 IGLV1-51P01701 117 aa7.67□□□□□ -1.18
VPS28-204ENST00000526054 CSN3P07498 182 aa7.67□□□□□ -1.18
VPS28-204ENST00000526054 PET100P0DJ07 73 aa7.67□□□□□ -1.18
VPS28-204ENST00000526054 CD300CQ08708 224 aa7.67□□□□□ -1.18
VPS28-204ENST00000526054 MLANAQ16655 118 aa7.67□□□□□ -1.18
VPS28-204ENST00000526054 ZFAND6Q6FIF0 208 aa7.67□□□□□ -1.18
VPS28-204ENST00000526054 UNQ9165/PRO28630Q6UXU0 137 aa7.67□□□□□ -1.18
VPS28-204ENST00000526054 IL34Q6ZMJ4 242 aa7.67□□□□□ -1.18
VPS28-204ENST00000526054 ZNF600Q6ZNG1 722 aa7.67□□□□□ -1.18
VPS28-204ENST00000526054 MARC2Q969Z3 335 aa7.67□□□□□ -1.18
VPS28-204ENST00000526054 ACY3Q96HD9 319 aa7.67□□□□□ -1.18
VPS28-204ENST00000526054 GINS3Q9BRX5 216 aa7.67□□□□□ -1.18
VPS28-204ENST00000526054 C20orf24Q9BUV8 137 aa7.67□□□□□ -1.18
VPS28-204ENST00000526054 DAZ1Q9NQZ3 744 aaKnown RBP7.67□□□□□ -1.18
VPS28-204ENST00000526054 BIRC6Q9NR09 4857 aa7.67□□□□□ -1.18
VPS28-204ENST00000526054 LCE6AA0A183 80 aa7.66□□□□□ -1.18
VPS28-204ENST00000526054 TMEM213A2RRL7 107 aa7.66□□□□□ -1.18
VPS28-204ENST00000526054 K7EMT4 169 aa7.66□□□□□ -1.18
VPS28-204ENST00000526054 SCAF4O95104 1147 aaKnown RBP7.66□□□□□ -1.18
VPS28-204ENST00000526054 C1QBP02746 253 aa7.66□□□□□ -1.18
VPS28-204ENST00000526054 IGLC1P0CG04 106 aa7.66□□□□□ -1.18
VPS28-204ENST00000526054 FOLR2P14207 255 aa7.66□□□□□ -1.18
VPS28-204ENST00000526054 OR10J1P30954 320 aa7.66□□□□□ -1.18
VPS28-204ENST00000526054 RAB32Q13637 225 aa7.66□□□□□ -1.18
VPS28-204ENST00000526054 TIGITQ495A1 244 aa7.66□□□□□ -1.18
VPS28-204ENST00000526054 TMEM14EPQ6UXP3 125 aa7.66□□□□□ -1.18
VPS28-204ENST00000526054 OR2K2Q8NGT1 345 aa7.66□□□□□ -1.18
VPS28-204ENST00000526054 PPP1R1CQ8WVI7 109 aa7.66□□□□□ -1.18
VPS28-204ENST00000526054 NPIPB3Q92617 1050 aa7.66□□□□□ -1.18
VPS28-204ENST00000526054 TECRQ9NZ01 308 aaKnown RBP7.66□□□□□ -1.18
VPS28-204ENST00000526054 MRPL27Q9P0M9 148 aaKnown RBP7.66□□□□□ -1.18
VPS28-204ENST00000526054 HYDINQ4G0P3 5121 aa7.65□□□□□ -1.18
VPS28-204ENST00000526054 ZFP92A6NM28 416 aa7.65□□□□□ -1.18
VPS28-204ENST00000526054 A8MZ25 164 aa7.65□□□□□ -1.18
VPS28-204ENST00000526054 SMLR1H3BR10 107 aa7.65□□□□□ -1.18
VPS28-204ENST00000526054 IGKV1-17P01599 117 aa7.65□□□□□ -1.18
VPS28-204ENST00000526054 RLN2P04090 185 aa7.65□□□□□ -1.18
VPS28-204ENST00000526054 FABP1P07148 127 aa7.65□□□□□ -1.18
VPS28-204ENST00000526054 METTL15P1P0C7V9 234 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms