RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 ANXA7P20073 488 aaKnown RBP4.83□□□□□ -1.64
CD44-221ENST00000526000 MFAP2P55001 183 aa4.83□□□□□ -1.64
CD44-221ENST00000526000 ATP5IP56385 69 aaPredicted RBP4.83□□□□□ -1.64
CD44-221ENST00000526000 SP6Q3SY56 376 aa4.83□□□□□ -1.64
CD44-221ENST00000526000 NMSQ5H8A3 153 aa4.83□□□□□ -1.64
CD44-221ENST00000526000 TMEM268Q5VZI3 342 aa4.83□□□□□ -1.64
CD44-221ENST00000526000 C12orf45Q8N5I9 185 aaPredicted RBP4.83□□□□□ -1.64
CD44-221ENST00000526000 TMEM217Q8N7C4 229 aa4.83□□□□□ -1.64
CD44-221ENST00000526000 OR1L8Q8NGR8 309 aa4.83□□□□□ -1.64
CD44-221ENST00000526000 GATAD1Q8WUU5 269 aa4.83□□□□□ -1.64
CD44-221ENST00000526000 ASB13Q8WXK3 278 aa4.83□□□□□ -1.64
CD44-221ENST00000526000 RHPN1-AS1Q9BWJ2 59 aa4.83□□□□□ -1.64
CD44-221ENST00000526000 ZNF436Q9C0F3 470 aaPredicted RBP4.83□□□□□ -1.64
CD44-221ENST00000526000 COMMD5Q9GZQ3 224 aa4.83□□□□□ -1.64
CD44-221ENST00000526000 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.83□□□□□ -1.64
CD44-221ENST00000526000 TMEM14BQ9NUH8 114 aa4.83□□□□□ -1.64
CD44-221ENST00000526000 SMPXQ9UHP9 88 aa4.83□□□□□ -1.64
CD44-221ENST00000526000 KIR2DL5BA0A0G2JN68 375 aa4.82□□□□□ -1.64
CD44-221ENST00000526000 KIR2DL5BA0A0G2JPC4 375 aa4.82□□□□□ -1.64
CD44-221ENST00000526000 OR4C46A6NHA9 309 aa4.82□□□□□ -1.64
CD44-221ENST00000526000 MED6O75586 246 aa4.82□□□□□ -1.64
CD44-221ENST00000526000 IGKV1-5P01602 117 aa4.82□□□□□ -1.64
CD44-221ENST00000526000 ADMP35318 185 aa4.82□□□□□ -1.64
CD44-221ENST00000526000 G6PCP35575 357 aa4.82□□□□□ -1.64
CD44-221ENST00000526000 ELLP55199 621 aaPredicted RBP4.82□□□□□ -1.64
CD44-221ENST00000526000 SPCS3P61009 180 aa4.82□□□□□ -1.64
CD44-221ENST00000526000 HSPE1P61604 102 aaKnown RBP4.82□□□□□ -1.64
CD44-221ENST00000526000 RPL11P62913 178 aaKnown RBP4.82□□□□□ -1.64
CD44-221ENST00000526000 CYCSP99999 105 aaKnown RBP4.82□□□□□ -1.64
CD44-221ENST00000526000 WT1-ASQ06250 92 aa4.82□□□□□ -1.64
CD44-221ENST00000526000 SMCO1Q147U7 214 aa4.82□□□□□ -1.64
CD44-221ENST00000526000 LEMD1Q68G75 181 aa4.82□□□□□ -1.64
CD44-221ENST00000526000 ZNF767PQ75MW2 155 aa4.82□□□□□ -1.64
CD44-221ENST00000526000 NOXA1Q86UR1 476 aa4.82□□□□□ -1.64
CD44-221ENST00000526000 KIR2DL5AQ8N109 375 aa4.82□□□□□ -1.64
CD44-221ENST00000526000 LILRB2Q8N423 598 aa4.82□□□□□ -1.64
CD44-221ENST00000526000 SLC35G3Q8N808 338 aa4.82□□□□□ -1.64
CD44-221ENST00000526000 KIR2DL5BQ8NHK3 375 aa4.82□□□□□ -1.64
CD44-221ENST00000526000 LHFPL5Q8TAF8 219 aa4.82□□□□□ -1.64
CD44-221ENST00000526000 C2CD4CQ8TF44 421 aa4.82□□□□□ -1.64
CD44-221ENST00000526000 SCARB1Q8WTV0 552 aa4.82□□□□□ -1.64
CD44-221ENST00000526000 TMEM190Q8WZ59 177 aa4.82□□□□□ -1.64
CD44-221ENST00000526000 MISP3Q96FF7 219 aa4.82□□□□□ -1.64
CD44-221ENST00000526000 PDCD10Q9BUL8 212 aa4.82□□□□□ -1.64
CD44-221ENST00000526000 QTRT1Q9BXR0 403 aaKnown RBP4.82□□□□□ -1.64
CD44-221ENST00000526000 C21orf62Q9NYP8 219 aa4.82□□□□□ -1.64
CD44-221ENST00000526000 THYN1Q9P016 225 aa4.82□□□□□ -1.64
CD44-221ENST00000526000 A0A0B4J293 547 aa4.81□□□□□ -1.64
CD44-221ENST00000526000 DNASE2O00115 360 aaPredicted RBP4.81□□□□□ -1.64
CD44-221ENST00000526000 NDUFA4O00483 81 aa4.81□□□□□ -1.64
CD44-221ENST00000526000 CHEK1O14757 476 aa4.81□□□□□ -1.64
CD44-221ENST00000526000 CA1P00915 261 aaPredicted RBP4.81□□□□□ -1.64
CD44-221ENST00000526000 APOHP02749 345 aaPredicted RBP4.81□□□□□ -1.64
CD44-221ENST00000526000 DEFB131AP59861 70 aa4.81□□□□□ -1.64
CD44-221ENST00000526000 PRCDQ00LT1 54 aa4.81□□□□□ -1.64
CD44-221ENST00000526000 KLK9Q2XQG4 91 aa4.81□□□□□ -1.64
CD44-221ENST00000526000 TCF24Q7RTU0 167 aa4.81□□□□□ -1.64
CD44-221ENST00000526000 LYZL2Q7Z4W2 148 aa4.81□□□□□ -1.64
CD44-221ENST00000526000 FAM24BQ8N5W8 94 aa4.81□□□□□ -1.64
CD44-221ENST00000526000 TMEM116Q8NCL8 245 aa4.81□□□□□ -1.64
CD44-221ENST00000526000 VN1R17PQ8TDU5 208 aa4.81□□□□□ -1.64
CD44-221ENST00000526000 GPR146Q96CH1 333 aa4.81□□□□□ -1.64
CD44-221ENST00000526000 CIB3Q96Q77 187 aaPredicted RBP4.81□□□□□ -1.64
CD44-221ENST00000526000 ENY2Q9NPA8 101 aa4.81□□□□□ -1.64
CD44-221ENST00000526000 DAZ1Q9NQZ3 744 aaKnown RBP4.81□□□□□ -1.64
CD44-221ENST00000526000 NDUFA4L2Q9NRX3 87 aa4.81□□□□□ -1.64
CD44-221ENST00000526000 KLK9Q9UKQ9 250 aa4.81□□□□□ -1.64
CD44-221ENST00000526000 APLNQ9ULZ1 77 aa4.81□□□□□ -1.64
CD44-221ENST00000526000 OR51B2Q9Y5P1 312 aa4.81□□□□□ -1.64
CD44-221ENST00000526000 DNAH10Q8IVF4 4471 aa4.8□□□□□ -1.64
CD44-221ENST00000526000 TRAV14DV4A0A0A6YYC5 116 aa4.8□□□□□ -1.64
CD44-221ENST00000526000 IGHV7-4-1A0A0J9YVY3 117 aa4.8□□□□□ -1.64
CD44-221ENST00000526000 KNCNA6PVL3 124 aa4.8□□□□□ -1.64
CD44-221ENST00000526000 F8W735 103 aaPredicted RBP4.8□□□□□ -1.64
CD44-221ENST00000526000 K7EIM0 57 aa4.8□□□□□ -1.64
CD44-221ENST00000526000 K7EMT4 169 aa4.8□□□□□ -1.64
CD44-221ENST00000526000 NUPL2O15504 423 aaKnown RBP4.8□□□□□ -1.64
CD44-221ENST00000526000 SSNA1O43805 119 aa4.8□□□□□ -1.64
CD44-221ENST00000526000 PITX3O75364 302 aa4.8□□□□□ -1.64
CD44-221ENST00000526000 DFFBO76075 338 aa4.8□□□□□ -1.64
CD44-221ENST00000526000 IFNA17P01571 189 aa4.8□□□□□ -1.64
CD44-221ENST00000526000 CTSGP08311 255 aa4.8□□□□□ -1.64
CD44-221ENST00000526000 HOXB5P09067 269 aa4.8□□□□□ -1.64
CD44-221ENST00000526000 RBMY1A1P0DJD3 496 aaKnown RBP4.8□□□□□ -1.64
CD44-221ENST00000526000 RBMY1CP0DJD4 496 aa4.8□□□□□ -1.64
CD44-221ENST00000526000 HLA-DMBP28068 263 aa4.8□□□□□ -1.64
CD44-221ENST00000526000 SUB1P53999 127 aaKnown RBP eCLIP4.8□□□□□ -1.64
CD44-221ENST00000526000 RPP30P78346 268 aaKnown RBP4.8□□□□□ -1.64
CD44-221ENST00000526000 ERHP84090 104 aaKnown RBP4.8□□□□□ -1.64
CD44-221ENST00000526000 RBMY1FQ15415 496 aaKnown RBP4.8□□□□□ -1.64
CD44-221ENST00000526000 SPINK9Q5DT21 86 aa4.8□□□□□ -1.64
CD44-221ENST00000526000 GGNBP1Q5YKI7 109 aa4.8□□□□□ -1.64
CD44-221ENST00000526000 GSG1LQ6UXU4 331 aa4.8□□□□□ -1.64
CD44-221ENST00000526000 ZNF114Q8NC26 417 aa4.8□□□□□ -1.64
CD44-221ENST00000526000 OR1S1Q8NH92 325 aa4.8□□□□□ -1.64
CD44-221ENST00000526000 PINX1Q96BK5 328 aaKnown RBP4.8□□□□□ -1.64
CD44-221ENST00000526000 BSCL2Q96G97 398 aaPredicted RBP4.8□□□□□ -1.64
CD44-221ENST00000526000 ATP6V0BQ99437 205 aa4.8□□□□□ -1.64
CD44-221ENST00000526000 SEC22CQ9BRL7 303 aa4.8□□□□□ -1.64
CD44-221ENST00000526000 NMES1Q9C002 83 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms