RNA–Protein interactions for RNA: ENST00000525617.2

LRRK1-204, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 614 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-204ENST00000525617 WWC2-AS2Q96NR7 200 aa10.8□□□□□ -0.68
LRRK1-204ENST00000525617 WDR12Q9GZL7 423 aaKnown RBP10.8□□□□□ -0.68
LRRK1-204ENST00000525617 C20orf85Q9H1P6 137 aa10.8□□□□□ -0.68
LRRK1-204ENST00000525617 TMEM231Q9H6L2 316 aa10.8□□□□□ -0.68
LRRK1-204ENST00000525617 SRD5A3Q9H8P0 318 aa10.8□□□□□ -0.68
LRRK1-204ENST00000525617 SYNGR2O43760 224 aa10.79□□□□□ -0.68
LRRK1-204ENST00000525617 IGLC1P0CG04 106 aa10.79□□□□□ -0.68
LRRK1-204ENST00000525617 IAPPP10997 89 aa10.79□□□□□ -0.68
LRRK1-204ENST00000525617 OR10J1P30954 320 aa10.79□□□□□ -0.68
LRRK1-204ENST00000525617 ZNF846Q147U1 533 aa10.79□□□□□ -0.68
LRRK1-204ENST00000525617 TIGITQ495A1 244 aa10.79□□□□□ -0.68
LRRK1-204ENST00000525617 MZT2BQ6NZ67 158 aa10.79□□□□□ -0.68
LRRK1-204ENST00000525617 NPIPB3Q92617 1050 aa10.79□□□□□ -0.68
LRRK1-204ENST00000525617 ACY3Q96HD9 319 aa10.79□□□□□ -0.68
LRRK1-204ENST00000525617 NARS2Q96I59 477 aaKnown RBP10.79□□□□□ -0.68
LRRK1-204ENST00000525617 RCHY1Q96PM5 261 aa10.79□□□□□ -0.68
LRRK1-204ENST00000525617 METTL26Q96S19 204 aa10.79□□□□□ -0.68
LRRK1-204ENST00000525617 RNF2Q99496 336 aa10.79□□□□□ -0.68
LRRK1-204ENST00000525617 ZFAND3Q9H8U3 227 aa10.79□□□□□ -0.68
LRRK1-204ENST00000525617 PAIP2BQ9ULR5 123 aaKnown RBP10.79□□□□□ -0.68
LRRK1-204ENST00000525617 IGHV3OR16-13A0A075B7E8 117 aa10.78□□□□□ -0.68
LRRK1-204ENST00000525617 IGHV3-74A0A0B4J1X5 117 aa10.78□□□□□ -0.68
LRRK1-204ENST00000525617 A0A1W2PS18 150 aa10.78□□□□□ -0.68
LRRK1-204ENST00000525617 WRBO00258 174 aa10.78□□□□□ -0.68
LRRK1-204ENST00000525617 IGKV1-17P01599 117 aa10.78□□□□□ -0.68
LRRK1-204ENST00000525617 GPX4P36969 197 aaPredicted RBP10.78□□□□□ -0.68
LRRK1-204ENST00000525617 YPEL3P61236 119 aaPredicted RBP10.78□□□□□ -0.68
LRRK1-204ENST00000525617 PAFAH1B2P68402 229 aa10.78□□□□□ -0.68
LRRK1-204ENST00000525617 HAGHQ16775 308 aa10.78□□□□□ -0.68
LRRK1-204ENST00000525617 SLC35E1Q96K37 410 aa10.78□□□□□ -0.68
LRRK1-204ENST00000525617 TM2D3Q9BRN9 247 aa10.78□□□□□ -0.68
LRRK1-204ENST00000525617 MAGT1Q9H0U3 335 aa10.78□□□□□ -0.68
LRRK1-204ENST00000525617 WFDC10AQ9H1F0 79 aa10.78□□□□□ -0.68
LRRK1-204ENST00000525617 TRAV6A0A075B6T7 132 aa10.77□□□□□ -0.69
LRRK1-204ENST00000525617 FAM240BA0A1B0GVZ2 78 aa10.77□□□□□ -0.69
LRRK1-204ENST00000525617 NKX2-1P43699 371 aaPredicted RBP10.77□□□□□ -0.69
LRRK1-204ENST00000525617 CMC4P56277 68 aaPredicted RBP10.77□□□□□ -0.69
LRRK1-204ENST00000525617 TCF24Q7RTU0 167 aa10.77□□□□□ -0.69
LRRK1-204ENST00000525617 MITD1Q8WV92 249 aa10.77□□□□□ -0.69
LRRK1-204ENST00000525617 SPATA25Q9BR10 227 aa10.77□□□□□ -0.69
LRRK1-204ENST00000525617 VSIRQ9H7M9 311 aa10.77□□□□□ -0.69
LRRK1-204ENST00000525617 NUDT15Q9NV35 164 aa10.77□□□□□ -0.69
LRRK1-204ENST00000525617 IGKV3-7A0A075B6H7 116 aa10.76□□□□□ -0.69
LRRK1-204ENST00000525617 MPTX1A8MV57 137 aa10.76□□□□□ -0.69
LRRK1-204ENST00000525617 RPL11P62913 178 aaKnown RBP10.76□□□□□ -0.69
LRRK1-204ENST00000525617 ID3Q02535 119 aa10.76□□□□□ -0.69
LRRK1-204ENST00000525617 LINC00322Q6ZN03 302 aaPredicted RBP10.76□□□□□ -0.69
LRRK1-204ENST00000525617 ST8SIA2Q92186 375 aa10.76□□□□□ -0.69
LRRK1-204ENST00000525617 GRAMD2BQ96HH9 432 aa10.76□□□□□ -0.69
LRRK1-204ENST00000525617 ZFP92A6NM28 416 aa10.75□□□□□ -0.69
LRRK1-204ENST00000525617 TOMM40O96008 361 aa10.75□□□□□ -0.69
LRRK1-204ENST00000525617 APOHP02749 345 aaPredicted RBP10.75□□□□□ -0.69
LRRK1-204ENST00000525617 IL4P05112 153 aa10.75□□□□□ -0.69
LRRK1-204ENST00000525617 FABP1P07148 127 aa10.75□□□□□ -0.69
LRRK1-204ENST00000525617 H2AFB2P0C5Z0 115 aa10.75□□□□□ -0.69
LRRK1-204ENST00000525617 RD3LP0DJH9 198 aa10.75□□□□□ -0.69
LRRK1-204ENST00000525617 CRYBB3P26998 211 aa10.75□□□□□ -0.69
LRRK1-204ENST00000525617 TFPI2P48307 235 aa10.75□□□□□ -0.69
LRRK1-204ENST00000525617 ASAH1Q13510 395 aa10.75□□□□□ -0.69
LRRK1-204ENST00000525617 GAMTQ14353 236 aa10.75□□□□□ -0.69
LRRK1-204ENST00000525617 IAH1Q2TAA2 248 aaPredicted RBP10.75□□□□□ -0.69
LRRK1-204ENST00000525617 SPANXN5Q5MJ07 72 aa10.75□□□□□ -0.69
LRRK1-204ENST00000525617 FAM90A2PQ658T7 463 aa10.75□□□□□ -0.69
LRRK1-204ENST00000525617 OR4D5Q8NGN0 318 aa10.75□□□□□ -0.69
LRRK1-204ENST00000525617 FAM110AQ9BQ89 295 aa10.75□□□□□ -0.69
LRRK1-204ENST00000525617 UBQLN2Q9UHD9 624 aa10.75□□□□□ -0.69
LRRK1-204ENST00000525617 STRAPQ9Y3F4 350 aaKnown RBP10.75□□□□□ -0.69
LRRK1-204ENST00000525617 LOC102724200A0A096LPH7 203 aaPredicted RBP10.74□□□□□ -0.69
LRRK1-204ENST00000525617 IGHV3-66A0A0C4DH42 116 aa10.74□□□□□ -0.69
LRRK1-204ENST00000525617 RBMY1BA6NDE4 496 aaKnown RBP10.74□□□□□ -0.69
LRRK1-204ENST00000525617 RBMY1EA6NEQ0 496 aaKnown RBP10.74□□□□□ -0.69
LRRK1-204ENST00000525617 DNASE2O00115 360 aaPredicted RBP10.74□□□□□ -0.69
LRRK1-204ENST00000525617 UPK1BO75841 260 aa10.74□□□□□ -0.69
LRRK1-204ENST00000525617 DFFBO76075 338 aa10.74□□□□□ -0.69
LRRK1-204ENST00000525617 SCGB1D2O95969 90 aa10.74□□□□□ -0.69
LRRK1-204ENST00000525617 HNRNPCP07910 306 aaKnown RBP eCLIP10.74□□□□□ -0.69
LRRK1-204ENST00000525617 RBMY1DP0C7P1 496 aaKnown RBP10.74□□□□□ -0.69
LRRK1-204ENST00000525617 EIF2B2P49770 351 aaKnown RBP10.74□□□□□ -0.69
LRRK1-204ENST00000525617 POLR2GP62487 172 aaKnown RBP eCLIP10.74□□□□□ -0.69
LRRK1-204ENST00000525617 GBGT1Q8N5D6 347 aa10.74□□□□□ -0.69
LRRK1-204ENST00000525617 OR51G1Q8NGK1 321 aa10.74□□□□□ -0.69
LRRK1-204ENST00000525617 ENKURQ8TC29 256 aa10.74□□□□□ -0.69
LRRK1-204ENST00000525617 ZNF431Q8TF32 576 aaPredicted RBP10.74□□□□□ -0.69
LRRK1-204ENST00000525617 GGTLC1Q9BX51 225 aa10.74□□□□□ -0.69
LRRK1-204ENST00000525617 PSENENQ9NZ42 101 aa10.74□□□□□ -0.69
LRRK1-204ENST00000525617 GSKIPQ9P0R6 139 aa10.74□□□□□ -0.69
LRRK1-204ENST00000525617 TBC1D24Q9ULP9 559 aa10.74□□□□□ -0.69
LRRK1-204ENST00000525617 H3BP45 60 aa10.73□□□□□ -0.69
LRRK1-204ENST00000525617 PSG1P11464 419 aa10.73□□□□□ -0.69
LRRK1-204ENST00000525617 P2RY1P47900 373 aa10.73□□□□□ -0.69
LRRK1-204ENST00000525617 WFDC3Q8IUB2 231 aa10.73□□□□□ -0.69
LRRK1-204ENST00000525617 ZBTB8BQ8NAP8 495 aaPredicted RBP10.73□□□□□ -0.69
LRRK1-204ENST00000525617 PFDN2Q9UHV9 154 aa10.73□□□□□ -0.69
LRRK1-204ENST00000525617 TRAV2A0A0B4J234 112 aa10.72□□□□□ -0.69
LRRK1-204ENST00000525617 SSSCA1O60232 199 aa10.72□□□□□ -0.69
LRRK1-204ENST00000525617 ODF3L2Q3SX64 289 aa10.72□□□□□ -0.69
LRRK1-204ENST00000525617 LILRB2Q8N423 598 aa10.72□□□□□ -0.69
LRRK1-204ENST00000525617 C12orf45Q8N5I9 185 aaPredicted RBP10.72□□□□□ -0.69
LRRK1-204ENST00000525617 SMIM8Q96KF7 97 aa10.72□□□□□ -0.69
LRRK1-204ENST00000525617 RAB40CQ96S21 281 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms