RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 C2CD4CQ8TF44 421 aa13.64□□□□□ -0.23
PTP4A3-206ENST00000524028 HEYLQ9NQ87 328 aaPredicted RBP13.64□□□□□ -0.23
PTP4A3-206ENST00000524028 C14orf166Q9Y224 244 aaKnown RBP13.64□□□□□ -0.23
PTP4A3-206ENST00000524028 IGHV4-28A0A0C4DH34 117 aa13.63□□□□□ -0.23
PTP4A3-206ENST00000524028 RGS5O15539 181 aa13.63□□□□□ -0.23
PTP4A3-206ENST00000524028 SSBP1Q04837 148 aaKnown RBP13.63□□□□□ -0.23
PTP4A3-206ENST00000524028 SPCS2Q15005 226 aa13.63□□□□□ -0.23
PTP4A3-206ENST00000524028 ACTL10Q5JWF8 245 aa13.63□□□□□ -0.23
PTP4A3-206ENST00000524028 C16orf54Q6UWD8 224 aa13.63□□□□□ -0.23
PTP4A3-206ENST00000524028 GPR132Q9UNW8 380 aa13.63□□□□□ -0.23
PTP4A3-206ENST00000524028 X6R8D5 127 aa13.63□□□□□ -0.23
PTP4A3-206ENST00000524028 RPS10-NUDT3A0A1W2PQS6 291 aa13.62□□□□□ -0.23
PTP4A3-206ENST00000524028 CRYM-AS1A6NIL9 109 aa13.62□□□□□ -0.23
PTP4A3-206ENST00000524028 SCGB2A1O75556 95 aa13.62□□□□□ -0.23
PTP4A3-206ENST00000524028 NXPH3O95157 252 aa13.62□□□□□ -0.23
PTP4A3-206ENST00000524028 SPP1P10451 314 aa13.62□□□□□ -0.23
PTP4A3-206ENST00000524028 OR10J1P30954 320 aa13.62□□□□□ -0.23
PTP4A3-206ENST00000524028 YPEL3P61236 119 aaPredicted RBP13.62□□□□□ -0.23
PTP4A3-206ENST00000524028 DHODHQ02127 395 aa13.62□□□□□ -0.23
PTP4A3-206ENST00000524028 SURF2Q15527 256 aaPredicted RBP13.62□□□□□ -0.23
PTP4A3-206ENST00000524028 USF2Q15853 346 aaPredicted RBP13.62□□□□□ -0.23
PTP4A3-206ENST00000524028 TMEM268Q5VZI3 342 aa13.62□□□□□ -0.23
PTP4A3-206ENST00000524028 MORN3Q6PF18 240 aaPredicted RBP13.62□□□□□ -0.23
PTP4A3-206ENST00000524028 CSNK1G2-AS1Q8NCQ2 148 aa13.62□□□□□ -0.23
PTP4A3-206ENST00000524028 OR4C16Q8NGL9 310 aa13.62□□□□□ -0.23
PTP4A3-206ENST00000524028 OR1S2Q8NGQ3 325 aa13.62□□□□□ -0.23
PTP4A3-206ENST00000524028 SMIM4Q8WVI0 70 aa13.62□□□□□ -0.23
PTP4A3-206ENST00000524028 GLMPQ8WWB7 406 aa13.62□□□□□ -0.23
PTP4A3-206ENST00000524028 NARS2Q96I59 477 aaKnown RBP13.62□□□□□ -0.23
PTP4A3-206ENST00000524028 CLEC5AQ9NY25 188 aa13.62□□□□□ -0.23
PTP4A3-206ENST00000524028 PRR13Q9NZ81 148 aa13.62□□□□□ -0.23
PTP4A3-206ENST00000524028 APLNQ9ULZ1 77 aa13.62□□□□□ -0.23
PTP4A3-206ENST00000524028 VPS13DQ5THJ4 4388 aa13.62□□□□□ -0.23
PTP4A3-206ENST00000524028 CEBPZOSA8MTT3 80 aa13.61□□□□□ -0.23
PTP4A3-206ENST00000524028 ZNF705EA8MWA4 302 aaPredicted RBP13.61□□□□□ -0.23
PTP4A3-206ENST00000524028 DISC1C4P0D8 188 aa13.61□□□□□ -0.23
PTP4A3-206ENST00000524028 HNRNPCP07910 306 aaKnown RBP eCLIP13.61□□□□□ -0.233e-7■■■■□ 19.6
PTP4A3-206ENST00000524028 SLC25A4P12235 298 aa13.61□□□□□ -0.23
PTP4A3-206ENST00000524028 MRPS10P82664 201 aaKnown RBP13.61□□□□□ -0.23
PTP4A3-206ENST00000524028 DHRS2Q13268 280 aa13.61□□□□□ -0.23
PTP4A3-206ENST00000524028 SLC24A4Q8NFF2 622 aa13.61□□□□□ -0.23
PTP4A3-206ENST00000524028 RNASEH2CQ8TDP1 164 aaKnown RBP13.61□□□□□ -0.23
PTP4A3-206ENST00000524028 Q8WTZ3 238 aa13.61□□□□□ -0.23
PTP4A3-206ENST00000524028 RAB40CQ96S21 281 aa13.61□□□□□ -0.23
PTP4A3-206ENST00000524028 HRH4Q9H3N8 390 aa13.61□□□□□ -0.23
PTP4A3-206ENST00000524028 TMEM56-RWDD3S4R434 201 aa13.61□□□□□ -0.23
PTP4A3-206ENST00000524028 ELOA3CA0A087WX78 387 aaPredicted RBP13.6□□□□□ -0.23
PTP4A3-206ENST00000524028 IGLL5B9A064 214 aa13.6□□□□□ -0.23
PTP4A3-206ENST00000524028 AKAIN1P0CW23 69 aa13.6□□□□□ -0.23
PTP4A3-206ENST00000524028 ALDH3B2P48448 385 aa13.6□□□□□ -0.23
PTP4A3-206ENST00000524028 TMEM41BQ5BJD5 291 aa13.6□□□□□ -0.23
PTP4A3-206ENST00000524028 PSMG4Q5JS54 123 aa13.6□□□□□ -0.23
PTP4A3-206ENST00000524028 NPIPB3Q92617 1050 aa13.6□□□□□ -0.23
PTP4A3-206ENST00000524028 AGRNO00468 2067 aa13.6□□□□□ -0.23
PTP4A3-206ENST00000524028 HELTA6NFD8 242 aa13.59□□□□□ -0.23
PTP4A3-206ENST00000524028 IL4P05112 153 aa13.59□□□□□ -0.23
PTP4A3-206ENST00000524028 MIFP14174 115 aa13.59□□□□□ -0.23
PTP4A3-206ENST00000524028 HLA-DMBP28068 263 aa13.59□□□□□ -0.23
PTP4A3-206ENST00000524028 TCTAP57738 103 aa13.59□□□□□ -0.23
PTP4A3-206ENST00000524028 NMSQ5H8A3 153 aa13.59□□□□□ -0.23
PTP4A3-206ENST00000524028 OR51S1Q8NGJ8 323 aa13.59□□□□□ -0.23
PTP4A3-206ENST00000524028 C11orf94C9JXX5 98 aa13.58□□□□□ -0.24
PTP4A3-206ENST00000524028 CTDSPLO15194 276 aa13.58□□□□□ -0.24
PTP4A3-206ENST00000524028 NPY1RP25929 384 aa13.58□□□□□ -0.24
PTP4A3-206ENST00000524028 IL18Q14116 193 aa13.58□□□□□ -0.24
PTP4A3-206ENST00000524028 Q6ZTC4 211 aa13.58□□□□□ -0.24
PTP4A3-206ENST00000524028 GPR141Q7Z602 305 aa13.58□□□□□ -0.24
PTP4A3-206ENST00000524028 FAM90A26D6RGX4 464 aa13.57□□□□□ -0.24
PTP4A3-206ENST00000524028 BUB3O43684 328 aa13.57□□□□□ -0.24
PTP4A3-206ENST00000524028 TOMM40O96008 361 aa13.57□□□□□ -0.24
PTP4A3-206ENST00000524028 SULT1A3P0DMM9 295 aa13.57□□□□□ -0.24
PTP4A3-206ENST00000524028 SULT1A4P0DMN0 295 aa13.57□□□□□ -0.24
PTP4A3-206ENST00000524028 EIF2B2P49770 351 aaKnown RBP13.57□□□□□ -0.24
PTP4A3-206ENST00000524028 AP2S1P53680 142 aaPredicted RBP13.57□□□□□ -0.24
PTP4A3-206ENST00000524028 CLVS1Q8IUQ0 354 aaPredicted RBP13.57□□□□□ -0.24
PTP4A3-206ENST00000524028 ACY3Q96HD9 319 aa13.57□□□□□ -0.24
PTP4A3-206ENST00000524028 DIRAS2Q96HU8 199 aa13.57□□□□□ -0.24
PTP4A3-206ENST00000524028 PRRT1Q99946 306 aa13.57□□□□□ -0.24
PTP4A3-206ENST00000524028 MRPS26Q9BYN8 205 aaKnown RBP13.57□□□□□ -0.24
PTP4A3-206ENST00000524028 TBC1D24Q9ULP9 559 aa13.57□□□□□ -0.24
PTP4A3-206ENST00000524028 HERC2O95714 4834 aa13.56□□□□□ -0.24
PTP4A3-206ENST00000524028 ANKRD20A5PA0PJZ0 165 aa13.56□□□□□ -0.24
PTP4A3-206ENST00000524028 RD3LP0DJH9 198 aa13.56□□□□□ -0.24
PTP4A3-206ENST00000524028 ETFRF1Q6IPR1 90 aa13.56□□□□□ -0.24
PTP4A3-206ENST00000524028 IL22RA2Q969J5 263 aa13.56□□□□□ -0.24
PTP4A3-206ENST00000524028 KRTAP17-1Q9BYP8 105 aa13.56□□□□□ -0.24
PTP4A3-206ENST00000524028 CELA1Q9UNI1 258 aa13.56□□□□□ -0.24
PTP4A3-206ENST00000524028 IFNA10P01566 189 aa13.55□□□□□ -0.24
PTP4A3-206ENST00000524028 PSG1P11464 419 aa13.55□□□□□ -0.24
PTP4A3-206ENST00000524028 SUPT4H1P63272 117 aaKnown RBP13.55□□□□□ -0.24
PTP4A3-206ENST00000524028 LYZL2Q7Z4W2 148 aa13.55□□□□□ -0.24
PTP4A3-206ENST00000524028 DYNC2LI1Q8TCX1 351 aa13.55□□□□□ -0.24
PTP4A3-206ENST00000524028 RBKSQ9H477 322 aa13.55□□□□□ -0.24
PTP4A3-206ENST00000524028 NRN1Q9NPD7 142 aa13.55□□□□□ -0.24
PTP4A3-206ENST00000524028 HSPB7Q9UBY9 170 aa13.55□□□□□ -0.24
PTP4A3-206ENST00000524028 TRAV10A0A0B4J240 114 aa13.54□□□□□ -0.24
PTP4A3-206ENST00000524028 H3BMM0 161 aa13.54□□□□□ -0.24
PTP4A3-206ENST00000524028 GSTZ1O43708 216 aaPredicted RBP13.54□□□□□ -0.24
PTP4A3-206ENST00000524028 SIGLEC15Q6ZMC9 328 aa13.54□□□□□ -0.24
PTP4A3-206ENST00000524028 OR51G1Q8NGK1 321 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 609.8 ms