RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 OR7D2Q96RA2 312 aa1.33□□□□□ -2.2
PCM1-219ENST00000523540 TMEM70Q9BUB7 260 aa1.33□□□□□ -2.2
PCM1-219ENST00000523540 TMEM147Q9BVK8 224 aa1.33□□□□□ -2.2
PCM1-219ENST00000523540 RNASE7Q9H1E1 156 aaKnown RBP1.33□□□□□ -2.2
PCM1-219ENST00000523540 HES4Q9HCC6 221 aa1.33□□□□□ -2.2
PCM1-219ENST00000523540 NIT2Q9NQR4 276 aa1.33□□□□□ -2.2
PCM1-219ENST00000523540 FAIMQ9NVQ4 179 aa1.33□□□□□ -2.2
PCM1-219ENST00000523540 FAM215AQ9Y5M1 114 aa1.33□□□□□ -2.2
PCM1-219ENST00000523540 U3KQ87 197 aa1.33□□□□□ -2.2
PCM1-219ENST00000523540 ERICH3Q5RHP9 1530 aa1.33□□□□□ -2.2
PCM1-219ENST00000523540 DOCK3Q8IZD9 2030 aa1.33□□□□□ -2.2
PCM1-219ENST00000523540 WNK3Q9BYP7 1800 aa1.33□□□□□ -2.2
PCM1-219ENST00000523540 ABCC12Q96J65 1359 aa1.33□□□□□ -2.2
PCM1-219ENST00000523540 MED23Q9ULK4 1368 aa1.33□□□□□ -2.2
PCM1-219ENST00000523540 MYH11P35749 1972 aa1.32□□□□□ -2.2
PCM1-219ENST00000523540 UBR2Q8IWV8 1755 aa1.32□□□□□ -2.2
PCM1-219ENST00000523540 PHIPQ8WWQ0 1821 aa1.32□□□□□ -2.2
PCM1-219ENST00000523540 TRAV26-2A0A0B4J265 109 aa1.32□□□□□ -2.2
PCM1-219ENST00000523540 MDFIC2A0A1B0GVS7 189 aa1.32□□□□□ -2.2
PCM1-219ENST00000523540 C5orf49A4QMS7 147 aa1.32□□□□□ -2.2
PCM1-219ENST00000523540 F6UZH7 168 aa1.32□□□□□ -2.2
PCM1-219ENST00000523540 INMT-MINDY4F8WBC2 141 aa1.32□□□□□ -2.2
PCM1-219ENST00000523540 J3QQQ9 107 aa1.32□□□□□ -2.2
PCM1-219ENST00000523540 AIPO00170 330 aa1.32□□□□□ -2.2
PCM1-219ENST00000523540 GGCTO75223 188 aaKnown RBP1.32□□□□□ -2.2
PCM1-219ENST00000523540 NDUFC2O95298 119 aa1.32□□□□□ -2.2
PCM1-219ENST00000523540 SERPINE1P05121 402 aa1.32□□□□□ -2.2
PCM1-219ENST00000523540 ZNF728P0DKX0 622 aa1.32□□□□□ -2.2
PCM1-219ENST00000523540 FGF6P10767 208 aa1.32□□□□□ -2.2
PCM1-219ENST00000523540 RPL7P18124 248 aaKnown RBP1.32□□□□□ -2.2
PCM1-219ENST00000523540 TAS2R45P59539 299 aa1.32□□□□□ -2.2
PCM1-219ENST00000523540 MAXP61244 160 aa1.32□□□□□ -2.2
PCM1-219ENST00000523540 RPL26P61254 145 aaKnown RBP1.32□□□□□ -2.2
PCM1-219ENST00000523540 SNRPD2P62316 118 aaKnown RBP1.32□□□□□ -2.2
PCM1-219ENST00000523540 RPS28P62857 69 aaKnown RBP1.32□□□□□ -2.2
PCM1-219ENST00000523540 MRPS10P82664 201 aaKnown RBP1.32□□□□□ -2.2
PCM1-219ENST00000523540 ZNF90Q03938 601 aa1.32□□□□□ -2.2
PCM1-219ENST00000523540 TMEM267Q0VDI3 215 aaPredicted RBP1.32□□□□□ -2.2
PCM1-219ENST00000523540 RHEBQ15382 184 aa1.32□□□□□ -2.2
PCM1-219ENST00000523540 OCIAD2Q56VL3 154 aa1.32□□□□□ -2.2
PCM1-219ENST00000523540 LCN8Q6JVE9 175 aa1.32□□□□□ -2.2
PCM1-219ENST00000523540 HAGHLQ6PII5 290 aaPredicted RBP1.32□□□□□ -2.2
PCM1-219ENST00000523540 SCIMPQ6UWF3 145 aa1.32□□□□□ -2.2
PCM1-219ENST00000523540 Q6ZTI0 123 aa1.32□□□□□ -2.2
PCM1-219ENST00000523540 DEFB119Q8N690 84 aa1.32□□□□□ -2.2
PCM1-219ENST00000523540 GDPD1Q8N9F7 314 aa1.32□□□□□ -2.2
PCM1-219ENST00000523540 OR2T4Q8NH00 348 aa1.32□□□□□ -2.2
PCM1-219ENST00000523540 ACOT12Q8WYK0 555 aa1.32□□□□□ -2.2
PCM1-219ENST00000523540 ARL11Q969Q4 196 aa1.32□□□□□ -2.2
PCM1-219ENST00000523540 MALSU1Q96EH3 234 aa1.32□□□□□ -2.2
PCM1-219ENST00000523540 LYSMD1Q96S90 227 aa1.32□□□□□ -2.2
PCM1-219ENST00000523540 CHST6Q9GZX3 395 aa1.32□□□□□ -2.2
PCM1-219ENST00000523540 TMEM222Q9H0R3 208 aa1.32□□□□□ -2.2
PCM1-219ENST00000523540 CACYBPQ9HB71 228 aaKnown RBP1.32□□□□□ -2.2
PCM1-219ENST00000523540 UQCC1Q9NVA1 299 aa1.32□□□□□ -2.2
PCM1-219ENST00000523540 MED11Q9P086 117 aa1.32□□□□□ -2.2
PCM1-219ENST00000523540 TRAPPC2LQ9UL33 140 aa1.32□□□□□ -2.2
PCM1-219ENST00000523540 RPL26L1Q9UNX3 145 aaKnown RBP1.32□□□□□ -2.2
PCM1-219ENST00000523540 NUP210Q8TEM1 1887 aaPredicted RBP1.32□□□□□ -2.2
PCM1-219ENST00000523540 HECW1Q76N89 1606 aa1.32□□□□□ -2.2
PCM1-219ENST00000523540 TCOF1Q13428 1488 aaKnown RBP1.31□□□□□ -2.2
PCM1-219ENST00000523540 AKAP11Q9UKA4 1901 aa1.31□□□□□ -2.2
PCM1-219ENST00000523540 SCN10AQ9Y5Y9 1956 aa1.31□□□□□ -2.2
PCM1-219ENST00000523540 MEIKINA0A087WXM9 373 aa1.31□□□□□ -2.2
PCM1-219ENST00000523540 C20orf202A1L168 122 aa1.31□□□□□ -2.2
PCM1-219ENST00000523540 IGKV2-29A2NJV5 120 aaPredicted RBP1.31□□□□□ -2.2
PCM1-219ENST00000523540 M0R2Z0 102 aa1.31□□□□□ -2.2
PCM1-219ENST00000523540 MRASO14807 208 aa1.31□□□□□ -2.2
PCM1-219ENST00000523540 GNG7O60262 68 aa1.31□□□□□ -2.2
PCM1-219ENST00000523540 CSN2P05814 226 aa1.31□□□□□ -2.2
PCM1-219ENST00000523540 GPX1P07203 203 aa1.31□□□□□ -2.2
PCM1-219ENST00000523540 C8GP07360 202 aa1.31□□□□□ -2.2
PCM1-219ENST00000523540 LGALS1P09382 135 aaKnown RBP1.31□□□□□ -2.2
PCM1-219ENST00000523540 CCL1P22362 96 aa1.31□□□□□ -2.2
PCM1-219ENST00000523540 RPS3P23396 243 aaKnown RBP eCLIP1.31□□□□□ -2.2
PCM1-219ENST00000523540 CMPK1P30085 196 aa1.31□□□□□ -2.2
PCM1-219ENST00000523540 SRIP30626 198 aa1.31□□□□□ -2.2
PCM1-219ENST00000523540 S100A11P31949 105 aa1.31□□□□□ -2.2
PCM1-219ENST00000523540 XCL1P47992 114 aa1.31□□□□□ -2.2
PCM1-219ENST00000523540 POLR2HP52434 150 aaKnown RBP1.31□□□□□ -2.2
PCM1-219ENST00000523540 CTBP2P56545 445 aa1.31□□□□□ -2.2
PCM1-219ENST00000523540 TAS2R30P59541 319 aa1.31□□□□□ -2.2
PCM1-219ENST00000523540 DEFA1P59665 94 aa1.31□□□□□ -2.2
PCM1-219ENST00000523540 NCS1P62166 190 aa1.31□□□□□ -2.2
PCM1-219ENST00000523540 HERVK_113P63121 156 aa1.31□□□□□ -2.2
PCM1-219ENST00000523540 TNFAIP6P98066 277 aaPredicted RBP1.31□□□□□ -2.2
PCM1-219ENST00000523540 FABP5Q01469 135 aa1.31□□□□□ -2.2
PCM1-219ENST00000523540 JOSD1Q15040 202 aaPredicted RBP1.31□□□□□ -2.2
PCM1-219ENST00000523540 KCNJ8Q15842 424 aa1.31□□□□□ -2.2
PCM1-219ENST00000523540 C12orf74Q32Q52 190 aa1.31□□□□□ -2.2
PCM1-219ENST00000523540 MORN2Q502X0 79 aa1.31□□□□□ -2.2
PCM1-219ENST00000523540 IBA57Q5T440 356 aaKnown RBP1.31□□□□□ -2.2
PCM1-219ENST00000523540 ATP5L2Q7Z4Y8 100 aa1.31□□□□□ -2.2
PCM1-219ENST00000523540 DEFB128Q7Z7B8 93 aa1.31□□□□□ -2.2
PCM1-219ENST00000523540 IFT20Q8IY31 132 aa1.31□□□□□ -2.2
PCM1-219ENST00000523540 ANKRD29Q8N6D5 301 aa1.31□□□□□ -2.2
PCM1-219ENST00000523540 CNEP1R1Q8N9A8 125 aa1.31□□□□□ -2.2
PCM1-219ENST00000523540 OR4E2Q8NGC2 313 aa1.31□□□□□ -2.2
PCM1-219ENST00000523540 OR5A1Q8NGJ0 315 aa1.31□□□□□ -2.2
PCM1-219ENST00000523540 OR13C8Q8NGS7 320 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 216 ms