RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 P2RY1P47900 373 aa15.2■□□□□ 0.02
SDCBP-209ENST00000522243 RBMS2Q15434 407 aaKnown RBP15.2■□□□□ 0.02
SDCBP-209ENST00000522243 STXBP6Q8NFX7 210 aa15.2■□□□□ 0.02
SDCBP-209ENST00000522243 SCGB3A2Q96PL1 93 aa15.2■□□□□ 0.02
SDCBP-209ENST00000522243 IGLC1P0CG04 106 aa15.19■□□□□ 0.02
SDCBP-209ENST00000522243 LYZL2Q7Z4W2 148 aa15.19■□□□□ 0.02
SDCBP-209ENST00000522243 OR1S2Q8NGQ3 325 aa15.19■□□□□ 0.02
SDCBP-209ENST00000522243 RNASEH2CQ8TDP1 164 aaKnown RBP15.19■□□□□ 0.02
SDCBP-209ENST00000522243 IL22RA2Q969J5 263 aa15.19■□□□□ 0.02
SDCBP-209ENST00000522243 RARRES2Q99969 163 aa15.19■□□□□ 0.02
SDCBP-209ENST00000522243 TRAV2A0A0B4J234 112 aa15.18■□□□□ 0.02
SDCBP-209ENST00000522243 NUPR2A6NF83 97 aa15.18■□□□□ 0.02
SDCBP-209ENST00000522243 CA1P00915 261 aaPredicted RBP15.18■□□□□ 0.02
SDCBP-209ENST00000522243 SLC25A4P12235 298 aa15.18■□□□□ 0.02
SDCBP-209ENST00000522243 NPY1RP25929 384 aa15.18■□□□□ 0.02
SDCBP-209ENST00000522243 OR10J1P30954 320 aa15.18■□□□□ 0.02
SDCBP-209ENST00000522243 SUPT4H1P63272 117 aaKnown RBP15.18■□□□□ 0.02
SDCBP-209ENST00000522243 Q8WTZ3 238 aa15.18■□□□□ 0.02
SDCBP-209ENST00000522243 NARS2Q96I59 477 aaKnown RBP15.18■□□□□ 0.02
SDCBP-209ENST00000522243 K7EQG2 157 aa15.17■□□□□ 0.02
SDCBP-209ENST00000522243 IFNA10P01566 189 aa15.17■□□□□ 0.02
SDCBP-209ENST00000522243 NMSQ5H8A3 153 aa15.17■□□□□ 0.02
SDCBP-209ENST00000522243 CEMP1Q6PRD7 247 aaPredicted RBP15.17■□□□□ 0.02
SDCBP-209ENST00000522243 OR11H2Q8NH07 326 aa15.17■□□□□ 0.02
SDCBP-209ENST00000522243 GATAD1Q8WUU5 269 aa15.17■□□□□ 0.02
SDCBP-209ENST00000522243 NPIPB3Q92617 1050 aa15.17■□□□□ 0.02
SDCBP-209ENST00000522243 ACY3Q96HD9 319 aa15.17■□□□□ 0.02
SDCBP-209ENST00000522243 DNAH1Q9P2D7 4330 aa15.17■□□□□ 0.02
SDCBP-209ENST00000522243 A0A0B4J2A0 478 aa15.16■□□□□ 0.02
SDCBP-209ENST00000522243 LY6G6CO95867 125 aa15.16■□□□□ 0.02
SDCBP-209ENST00000522243 CCR6P51684 374 aa15.16■□□□□ 0.02
SDCBP-209ENST00000522243 SMCO1Q147U7 214 aa15.16■□□□□ 0.02
SDCBP-209ENST00000522243 PYDC2Q56P42 97 aa15.16■□□□□ 0.02
SDCBP-209ENST00000522243 TMEM217Q8N7C4 229 aa15.16■□□□□ 0.02
SDCBP-209ENST00000522243 LINC00476Q8WZB0 136 aa15.16■□□□□ 0.02
SDCBP-209ENST00000522243 GRAMD2BQ96HH9 432 aa15.16■□□□□ 0.02
SDCBP-209ENST00000522243 RBKSQ9H477 322 aa15.16■□□□□ 0.02
SDCBP-209ENST00000522243 SHPKQ9UHJ6 478 aa15.16■□□□□ 0.02
SDCBP-209ENST00000522243 HNRNPCP07910 306 aaKnown RBP eCLIP15.15■□□□□ 0.02
SDCBP-209ENST00000522243 ZNF688P0C7X2 276 aa15.15■□□□□ 0.02
SDCBP-209ENST00000522243 YPEL3P61236 119 aaPredicted RBP15.15■□□□□ 0.02
SDCBP-209ENST00000522243 KLF9Q13886 244 aaPredicted RBP15.15■□□□□ 0.02
SDCBP-209ENST00000522243 ETFRF1Q6IPR1 90 aa15.15■□□□□ 0.02
SDCBP-209ENST00000522243 TMED4Q7Z7H5 227 aa15.15■□□□□ 0.02
SDCBP-209ENST00000522243 STHQ8IWL8 128 aa15.15■□□□□ 0.02
SDCBP-209ENST00000522243 LGI3Q8N145 548 aa15.15■□□□□ 0.02
SDCBP-209ENST00000522243 DTD1Q8TEA8 209 aa15.15■□□□□ 0.02
SDCBP-209ENST00000522243 U3KQE9 123 aa15.15■□□□□ 0.02
SDCBP-209ENST00000522243 AGRNO00468 2067 aa15.15■□□□□ 0.02
SDCBP-209ENST00000522243 CCDC160A6NGH7 325 aa15.14■□□□□ 0.01
SDCBP-209ENST00000522243 KNCNA6PVL3 124 aa15.14■□□□□ 0.01
SDCBP-209ENST00000522243 IL4P05112 153 aa15.14■□□□□ 0.01
SDCBP-209ENST00000522243 ANXA3P12429 323 aa15.14■□□□□ 0.01
SDCBP-209ENST00000522243 ATF4P18848 351 aaPredicted RBP15.14■□□□□ 0.01
SDCBP-209ENST00000522243 USF2Q15853 346 aaPredicted RBP15.14■□□□□ 0.01
SDCBP-209ENST00000522243 NOXA1Q86UR1 476 aa15.14■□□□□ 0.01
SDCBP-209ENST00000522243 DCANP1Q8TF63 244 aa15.14■□□□□ 0.01
SDCBP-209ENST00000522243 TRIM63Q969Q1 353 aa15.14■□□□□ 0.01
SDCBP-209ENST00000522243 HSPB7Q9UBY9 170 aa15.14■□□□□ 0.01
SDCBP-209ENST00000522243 DEFB4AO15263 64 aa15.13■□□□□ 0.01
SDCBP-209ENST00000522243 FAUP35544 74 aaKnown RBP15.13■□□□□ 0.01
SDCBP-209ENST00000522243 DHRS2Q13268 280 aa15.13■□□□□ 0.01
SDCBP-209ENST00000522243 C16orf54Q6UWD8 224 aa15.13■□□□□ 0.01
SDCBP-209ENST00000522243 TOMM5Q8N4H5 51 aa15.13■□□□□ 0.01
SDCBP-209ENST00000522243 OR1S1Q8NH92 325 aa15.13■□□□□ 0.01
SDCBP-209ENST00000522243 PHLDA1Q8WV24 401 aaPredicted RBP15.13■□□□□ 0.01
SDCBP-209ENST00000522243 GLMPQ8WWB7 406 aa15.13■□□□□ 0.01
SDCBP-209ENST00000522243 CACFD1Q9UGQ2 172 aa15.13■□□□□ 0.01
SDCBP-209ENST00000522243 U3KQ87 197 aa15.13■□□□□ 0.01
SDCBP-209ENST00000522243 V9GYH0 126 aa15.13■□□□□ 0.01
SDCBP-209ENST00000522243 HYDINQ4G0P3 5121 aa15.12■□□□□ 0.01
SDCBP-209ENST00000522243 NANOS2P60321 138 aaKnown RBP15.12■□□□□ 0.01
SDCBP-209ENST00000522243 KLK5Q9Y337 293 aaPredicted RBP15.12■□□□□ 0.01
SDCBP-209ENST00000522243 HELTA6NFD8 242 aa15.11■□□□□ 0.01
SDCBP-209ENST00000522243 TOMM40O96008 361 aa15.11■□□□□ 0.01
SDCBP-209ENST00000522243 IFNA4P05014 189 aa15.11■□□□□ 0.01
SDCBP-209ENST00000522243 RD3LP0DJH9 198 aa15.11■□□□□ 0.01
SDCBP-209ENST00000522243 EIF2B2P49770 351 aaKnown RBP15.11■□□□□ 0.01
SDCBP-209ENST00000522243 SRPXP78539 464 aa15.11■□□□□ 0.01
SDCBP-209ENST00000522243 ZNF79Q15937 498 aa15.11■□□□□ 0.01
SDCBP-209ENST00000522243 TRPT1Q86TN4 253 aaKnown RBP15.11■□□□□ 0.01
SDCBP-209ENST00000522243 FBXL17Q9UF56 701 aa15.11■□□□□ 0.01
SDCBP-209ENST00000522243 PSG1P11464 419 aa15.1■□□□□ 0.01
SDCBP-209ENST00000522243 AP3S2P59780 193 aa15.1■□□□□ 0.01
SDCBP-209ENST00000522243 ACTL10Q5JWF8 245 aa15.1■□□□□ 0.01
SDCBP-209ENST00000522243 OR51G1Q8NGK1 321 aa15.1■□□□□ 0.01
SDCBP-209ENST00000522243 C11orf45Q8TAV5 145 aa15.1■□□□□ 0.01
SDCBP-209ENST00000522243 GIG44P09565 113 aaPredicted RBP15.09■□□□□ 0.01
SDCBP-209ENST00000522243 IAPPP10997 89 aa15.09■□□□□ 0.01
SDCBP-209ENST00000522243 C4BPBP20851 252 aa15.09■□□□□ 0.01
SDCBP-209ENST00000522243 VAMP1P23763 118 aa15.09■□□□□ 0.01
SDCBP-209ENST00000522243 S100A5P33763 92 aa15.09■□□□□ 0.01
SDCBP-209ENST00000522243 TMEM128Q5BJH2 165 aa15.09■□□□□ 0.01
SDCBP-209ENST00000522243 PSMG4Q5JS54 123 aa15.09■□□□□ 0.01
SDCBP-209ENST00000522243 C11orf68Q9H3H3 251 aaKnown RBP15.09■□□□□ 0.01
SDCBP-209ENST00000522243 ALMS1Q8TCU4 4167 aa15.09■□□□□ 0.01
SDCBP-209ENST00000522243 BUB3O43684 328 aa15.08■□□□□ 0
SDCBP-209ENST00000522243 AP2S1P53680 142 aaPredicted RBP15.08■□□□□ 0
SDCBP-209ENST00000522243 PBDC1Q9BVG4 233 aa15.08■□□□□ 0
SDCBP-209ENST00000522243 ZFP92A6NM28 416 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms