RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 CLPSL1A2RUU4 121 aa6.96□□□□□ -1.3
CSMD1-208ENST00000520561 OR2T8A6NH00 312 aa6.96□□□□□ -1.3
CSMD1-208ENST00000520561 NUPL2O15504 423 aaKnown RBP6.96□□□□□ -1.3
CSMD1-208ENST00000520561 IGHV3-11P01762 117 aa6.96□□□□□ -1.3
CSMD1-208ENST00000520561 RPLP1P05386 114 aaKnown RBP6.96□□□□□ -1.3
CSMD1-208ENST00000520561 IGLC1P0CG04 106 aa6.96□□□□□ -1.3
CSMD1-208ENST00000520561 SPP1P10451 314 aa6.96□□□□□ -1.3
CSMD1-208ENST00000520561 ELLP55199 621 aaPredicted RBP6.96□□□□□ -1.3
CSMD1-208ENST00000520561 B2MP61769 119 aa6.96□□□□□ -1.3
CSMD1-208ENST00000520561 SELENOTP62341 195 aa6.96□□□□□ -1.3
CSMD1-208ENST00000520561 SRSF2Q01130 221 aaKnown RBP6.96□□□□□ -1.3
CSMD1-208ENST00000520561 AKR1C8PQ5T2L2 129 aa6.96□□□□□ -1.3
CSMD1-208ENST00000520561 TEX261Q6UWH6 196 aa6.96□□□□□ -1.3
CSMD1-208ENST00000520561 C10orf99Q6UWK7 81 aa6.96□□□□□ -1.3
CSMD1-208ENST00000520561 TMEM182Q6ZP80 229 aaPredicted RBP6.96□□□□□ -1.3
CSMD1-208ENST00000520561 LCNL1Q6ZST4 164 aa6.96□□□□□ -1.3
CSMD1-208ENST00000520561 STPG3Q8N7X2 389 aa6.96□□□□□ -1.3
CSMD1-208ENST00000520561 RNF152Q8N8N0 203 aa6.96□□□□□ -1.3
CSMD1-208ENST00000520561 BPIFCQ8NFQ6 507 aa6.96□□□□□ -1.3
CSMD1-208ENST00000520561 OR5AU1Q8NGC0 362 aa6.96□□□□□ -1.3
CSMD1-208ENST00000520561 OR2G3Q8NGZ4 309 aa6.96□□□□□ -1.3
CSMD1-208ENST00000520561 TMED6Q8WW62 240 aa6.96□□□□□ -1.3
CSMD1-208ENST00000520561 CCDC140Q96MF4 163 aa6.96□□□□□ -1.3
CSMD1-208ENST00000520561 GNB4Q9HAV0 340 aa6.96□□□□□ -1.3
CSMD1-208ENST00000520561 UBQLN2Q9UHD9 624 aa6.96□□□□□ -1.3
CSMD1-208ENST00000520561 RNF114Q9Y508 228 aa6.96□□□□□ -1.3
CSMD1-208ENST00000520561 PXMP4Q9Y6I8 212 aa6.96□□□□□ -1.3
CSMD1-208ENST00000520561 IGKV1D-37A0A075B6S9 117 aa6.95□□□□□ -1.3
CSMD1-208ENST00000520561 IGKV1OR2-108A0A075B7D4 117 aa6.95□□□□□ -1.3
CSMD1-208ENST00000520561 HAX1O00165 279 aa6.95□□□□□ -1.3
CSMD1-208ENST00000520561 TGOLN2O43493 480 aa6.95□□□□□ -1.3
CSMD1-208ENST00000520561 TSPAN15O95858 294 aa6.95□□□□□ -1.3
CSMD1-208ENST00000520561 CFDP00746 253 aaPredicted RBP6.95□□□□□ -1.3
CSMD1-208ENST00000520561 MBP02144 154 aa6.95□□□□□ -1.3
CSMD1-208ENST00000520561 LGALS1P09382 135 aaKnown RBP6.95□□□□□ -1.3
CSMD1-208ENST00000520561 RPL29P47914 159 aaKnown RBP6.95□□□□□ -1.3
CSMD1-208ENST00000520561 SERF2P84101 59 aa6.95□□□□□ -1.3
CSMD1-208ENST00000520561 ZNF616Q08AN1 781 aa6.95□□□□□ -1.3
CSMD1-208ENST00000520561 TIGITQ495A1 244 aa6.95□□□□□ -1.3
CSMD1-208ENST00000520561 FFAR4Q5NUL3 377 aa6.95□□□□□ -1.3
CSMD1-208ENST00000520561 SPSB3Q6PJ21 355 aa6.95□□□□□ -1.3
CSMD1-208ENST00000520561 ALKAL2Q6UX46 152 aa6.95□□□□□ -1.3
CSMD1-208ENST00000520561 CLEC19AQ6UXS0 136 aa6.95□□□□□ -1.3
CSMD1-208ENST00000520561 ZNF767PQ75MW2 155 aa6.95□□□□□ -1.3
CSMD1-208ENST00000520561 ZNF680Q8NEM1 530 aa6.95□□□□□ -1.3
CSMD1-208ENST00000520561 MYOZ3Q8TDC0 251 aa6.95□□□□□ -1.3
CSMD1-208ENST00000520561 SLC39A9Q9NUM3 307 aa6.95□□□□□ -1.3
CSMD1-208ENST00000520561 SLC45A2Q9UMX9 530 aa6.95□□□□□ -1.3
CSMD1-208ENST00000520561 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.94□□□□□ -1.3
CSMD1-208ENST00000520561 NUDT19A8MXV4 375 aa6.94□□□□□ -1.3
CSMD1-208ENST00000520561 UMAD1C9J7I0 102 aa6.94□□□□□ -1.3
CSMD1-208ENST00000520561 F8W735 103 aaPredicted RBP6.94□□□□□ -1.3
CSMD1-208ENST00000520561 TOMM40O96008 361 aa6.94□□□□□ -1.3
CSMD1-208ENST00000520561 LINC00869P0C866 280 aa6.94□□□□□ -1.3
CSMD1-208ENST00000520561 ARL3P36405 182 aa6.94□□□□□ -1.3
CSMD1-208ENST00000520561 RAB5CP51148 216 aa6.94□□□□□ -1.3
CSMD1-208ENST00000520561 PROK1P58294 105 aa6.94□□□□□ -1.3
CSMD1-208ENST00000520561 YPEL3P61236 119 aaPredicted RBP6.94□□□□□ -1.3
CSMD1-208ENST00000520561 ZNF90Q03938 601 aa6.94□□□□□ -1.3
CSMD1-208ENST00000520561 RELQ04864 619 aaPredicted RBP6.94□□□□□ -1.3
CSMD1-208ENST00000520561 FOXL1Q12952 345 aa6.94□□□□□ -1.3
CSMD1-208ENST00000520561 ACOT6Q3I5F7 207 aaPredicted RBP6.94□□□□□ -1.3
CSMD1-208ENST00000520561 MIC13Q5XKP0 118 aa6.94□□□□□ -1.3
CSMD1-208ENST00000520561 ZNF343Q6P1L6 599 aa6.94□□□□□ -1.3
CSMD1-208ENST00000520561 Q6ZRG5 221 aa6.94□□□□□ -1.3
CSMD1-208ENST00000520561 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.94□□□□□ -1.3
CSMD1-208ENST00000520561 ZNF491Q8N8L2 437 aa6.94□□□□□ -1.3
CSMD1-208ENST00000520561 OR1L4Q8NGR5 311 aa6.94□□□□□ -1.3
CSMD1-208ENST00000520561 Q8WTZ3 238 aa6.94□□□□□ -1.3
CSMD1-208ENST00000520561 UBE2E2Q96LR5 201 aa6.94□□□□□ -1.3
CSMD1-208ENST00000520561 OR5B12Q96R08 314 aa6.94□□□□□ -1.3
CSMD1-208ENST00000520561 CELSR1Q9NYQ6 3014 aa6.94□□□□□ -1.3
CSMD1-208ENST00000520561 ZFHX3Q15911 3703 aa6.93□□□□□ -1.3
CSMD1-208ENST00000520561 ANKRD34BA5PLL1 514 aa6.93□□□□□ -1.3
CSMD1-208ENST00000520561 COX7A2P2O60397 106 aa6.93□□□□□ -1.3
CSMD1-208ENST00000520561 IGKV1-17P01599 117 aa6.93□□□□□ -1.3
CSMD1-208ENST00000520561 CLEC3BP05452 202 aa6.93□□□□□ -1.3
CSMD1-208ENST00000520561 RD3LP0DJH9 198 aa6.93□□□□□ -1.3
CSMD1-208ENST00000520561 M6PRP20645 277 aa6.93□□□□□ -1.3
CSMD1-208ENST00000520561 GATA2P23769 480 aaPredicted RBP6.93□□□□□ -1.3
CSMD1-208ENST00000520561 SULT1A2P50226 295 aa6.93□□□□□ -1.3
CSMD1-208ENST00000520561 RAB14P61106 215 aa6.93□□□□□ -1.3
CSMD1-208ENST00000520561 LYZP61626 148 aa6.93□□□□□ -1.3
CSMD1-208ENST00000520561 PRR20EP86478 221 aa6.93□□□□□ -1.3
CSMD1-208ENST00000520561 PRR20CP86479 221 aa6.93□□□□□ -1.3
CSMD1-208ENST00000520561 PRR20DP86480 221 aa6.93□□□□□ -1.3
CSMD1-208ENST00000520561 PRR20BP86481 221 aa6.93□□□□□ -1.3
CSMD1-208ENST00000520561 PRR20AP86496 221 aa6.93□□□□□ -1.3
CSMD1-208ENST00000520561 IFITM2Q01629 132 aa6.93□□□□□ -1.3
CSMD1-208ENST00000520561 TMEM41BQ5BJD5 291 aa6.93□□□□□ -1.3
CSMD1-208ENST00000520561 FAM74A1Q5RGS3 127 aa6.93□□□□□ -1.3
CSMD1-208ENST00000520561 PXDC1Q5TGL8 231 aa6.93□□□□□ -1.3
CSMD1-208ENST00000520561 ZNF600Q6ZNG1 722 aa6.93□□□□□ -1.3
CSMD1-208ENST00000520561 OR51G1Q8NGK1 321 aa6.93□□□□□ -1.3
CSMD1-208ENST00000520561 LRRC20Q8TCA0 184 aa6.93□□□□□ -1.3
CSMD1-208ENST00000520561 WIPF2Q8TF74 440 aaPredicted RBP6.93□□□□□ -1.3
CSMD1-208ENST00000520561 RNF141Q8WVD5 230 aa6.93□□□□□ -1.3
CSMD1-208ENST00000520561 C4orf3Q8WVX3 66 aa6.93□□□□□ -1.3
CSMD1-208ENST00000520561 PFDN5Q99471 154 aa6.93□□□□□ -1.3
CSMD1-208ENST00000520561 DOK5Q9P104 306 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms