RNA–Protein interactions for RNA: ENST00000520199.5

CLK4-205, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 857 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-205ENST00000520199 PITX3O75364 302 aa11.36□□□□□ -0.59
CLK4-205ENST00000520199 ATF4P18848 351 aaPredicted RBP11.36□□□□□ -0.59
CLK4-205ENST00000520199 NPPCP23582 126 aa11.36□□□□□ -0.59
CLK4-205ENST00000520199 P2RY1P47900 373 aa11.36□□□□□ -0.59
CLK4-205ENST00000520199 SLC24A4Q8NFF2 622 aa11.36□□□□□ -0.59
CLK4-205ENST00000520199 MCFD2Q8NI22 146 aa11.36□□□□□ -0.59
CLK4-205ENST00000520199 RNASE11Q8TAA1 199 aaKnown RBP11.36□□□□□ -0.59
CLK4-205ENST00000520199 GLMPQ8WWB7 406 aa11.36□□□□□ -0.59
CLK4-205ENST00000520199 IL22RA2Q969J5 263 aa11.36□□□□□ -0.59
CLK4-205ENST00000520199 HEYLQ9NQ87 328 aaPredicted RBP11.36□□□□□ -0.59
CLK4-205ENST00000520199 HSPB7Q9UBY9 170 aa11.36□□□□□ -0.59
CLK4-205ENST00000520199 RSL24D1Q9UHA3 163 aaKnown RBP11.36□□□□□ -0.59
CLK4-205ENST00000520199 DNAH6Q9C0G6 4158 aa11.36□□□□□ -0.59
CLK4-205ENST00000520199 IGKV1D-37A0A075B6S9 117 aa11.35□□□□□ -0.59
CLK4-205ENST00000520199 MPTX1A8MV57 137 aa11.35□□□□□ -0.59
CLK4-205ENST00000520199 AKR1C4P17516 323 aa11.35□□□□□ -0.59
CLK4-205ENST00000520199 CEMP1Q6PRD7 247 aaPredicted RBP11.35□□□□□ -0.59
CLK4-205ENST00000520199 RNASEH2CQ8TDP1 164 aaKnown RBP11.35□□□□□ -0.59
CLK4-205ENST00000520199 NPIPB3Q92617 1050 aa11.35□□□□□ -0.59
CLK4-205ENST00000520199 RBKSQ9H477 322 aa11.35□□□□□ -0.59
CLK4-205ENST00000520199 ENY2Q9NPA8 101 aa11.35□□□□□ -0.59
CLK4-205ENST00000520199 RABL2AQ9UBK7 228 aaPredicted RBP11.35□□□□□ -0.59
CLK4-205ENST00000520199 RABL2BQ9UNT1 228 aa11.35□□□□□ -0.59
CLK4-205ENST00000520199 A0A0B4J2A0 478 aa11.34□□□□□ -0.59
CLK4-205ENST00000520199 KNCNA6PVL3 124 aa11.34□□□□□ -0.59
CLK4-205ENST00000520199 CEBPZOSA8MTT3 80 aa11.34□□□□□ -0.59
CLK4-205ENST00000520199 DEFB4AO15263 64 aa11.34□□□□□ -0.59
CLK4-205ENST00000520199 SULT1A3P0DMM9 295 aa11.34□□□□□ -0.59
CLK4-205ENST00000520199 SULT1A4P0DMN0 295 aa11.34□□□□□ -0.59
CLK4-205ENST00000520199 C4BPBP20851 252 aa11.34□□□□□ -0.59
CLK4-205ENST00000520199 OR10J1P30954 320 aa11.34□□□□□ -0.59
CLK4-205ENST00000520199 YPEL3P61236 119 aaPredicted RBP11.34□□□□□ -0.59
CLK4-205ENST00000520199 C16orf54Q6UWD8 224 aa11.34□□□□□ -0.59
CLK4-205ENST00000520199 GSG1LQ6UXU4 331 aa11.34□□□□□ -0.59
CLK4-205ENST00000520199 TRPT1Q86TN4 253 aaKnown RBP11.34□□□□□ -0.59
CLK4-205ENST00000520199 MCUBQ9NWR8 336 aa11.34□□□□□ -0.59
CLK4-205ENST00000520199 SHPKQ9UHJ6 478 aa11.34□□□□□ -0.59
CLK4-205ENST00000520199 CXorf65A6NEN9 183 aa11.33□□□□□ -0.6
CLK4-205ENST00000520199 JTBO76095 146 aa11.33□□□□□ -0.6
CLK4-205ENST00000520199 NPY1RP25929 384 aa11.33□□□□□ -0.6
CLK4-205ENST00000520199 CMC4P56277 68 aaPredicted RBP11.33□□□□□ -0.6
CLK4-205ENST00000520199 CCDC190Q86UF4 302 aa11.33□□□□□ -0.6
CLK4-205ENST00000520199 OR1S2Q8NGQ3 325 aa11.33□□□□□ -0.6
CLK4-205ENST00000520199 OR11H2Q8NH07 326 aa11.33□□□□□ -0.6
CLK4-205ENST00000520199 METTL26Q96S19 204 aa11.33□□□□□ -0.6
CLK4-205ENST00000520199 SCP2D1Q9UJQ7 156 aa11.33□□□□□ -0.6
CLK4-205ENST00000520199 TRAV30A0A087WSZ9 112 aa11.32□□□□□ -0.6
CLK4-205ENST00000520199 DNASE2O00115 360 aaPredicted RBP11.32□□□□□ -0.6
CLK4-205ENST00000520199 CD5P06127 495 aa11.32□□□□□ -0.6
CLK4-205ENST00000520199 ZNF688P0C7X2 276 aa11.32□□□□□ -0.6
CLK4-205ENST00000520199 RBMY1A1P0DJD3 496 aaKnown RBP11.32□□□□□ -0.6
CLK4-205ENST00000520199 RBMY1CP0DJD4 496 aa11.32□□□□□ -0.6
CLK4-205ENST00000520199 SLC25A4P12235 298 aa11.32□□□□□ -0.6
CLK4-205ENST00000520199 CCR6P51684 374 aa11.32□□□□□ -0.6
CLK4-205ENST00000520199 RPL11P62913 178 aaKnown RBP11.32□□□□□ -0.6
CLK4-205ENST00000520199 PAFAH1B2P68402 229 aa11.32□□□□□ -0.6
CLK4-205ENST00000520199 SMCO1Q147U7 214 aa11.32□□□□□ -0.6
CLK4-205ENST00000520199 RBMY1FQ15415 496 aaKnown RBP11.32□□□□□ -0.6
CLK4-205ENST00000520199 Q8NAQ8 132 aa11.32□□□□□ -0.6
CLK4-205ENST00000520199 CSNK1G2-AS1Q8NCQ2 148 aa11.32□□□□□ -0.6
CLK4-205ENST00000520199 STXBP6Q8NFX7 210 aa11.32□□□□□ -0.6
CLK4-205ENST00000520199 GATAD1Q8WUU5 269 aa11.32□□□□□ -0.6
CLK4-205ENST00000520199 GRAMD2BQ96HH9 432 aa11.32□□□□□ -0.6
CLK4-205ENST00000520199 RARRES2Q99969 163 aa11.32□□□□□ -0.6
CLK4-205ENST00000520199 RABAC1Q9UI14 185 aa11.32□□□□□ -0.6
CLK4-205ENST00000520199 IGKV1OR2-108A0A075B7D4 117 aa11.31□□□□□ -0.6
CLK4-205ENST00000520199 BUB3O43684 328 aa11.31□□□□□ -0.6
CLK4-205ENST00000520199 CA1P00915 261 aaPredicted RBP11.31□□□□□ -0.6
CLK4-205ENST00000520199 PSG1P11464 419 aa11.31□□□□□ -0.6
CLK4-205ENST00000520199 NANOS2P60321 138 aaKnown RBP11.31□□□□□ -0.6
CLK4-205ENST00000520199 ZNF90Q03938 601 aa11.31□□□□□ -0.6
CLK4-205ENST00000520199 GAMTQ14353 236 aa11.31□□□□□ -0.6
CLK4-205ENST00000520199 DTD1Q8TEA8 209 aa11.31□□□□□ -0.6
CLK4-205ENST00000520199 PHLDA1Q8WV24 401 aaPredicted RBP11.31□□□□□ -0.6
CLK4-205ENST00000520199 ACY3Q96HD9 319 aa11.31□□□□□ -0.6
CLK4-205ENST00000520199 SDHCQ99643 169 aaPredicted RBP11.31□□□□□ -0.6
CLK4-205ENST00000520199 KCNIP3Q9Y2W7 256 aa11.31□□□□□ -0.6
CLK4-205ENST00000520199 RPS10-NUDT3A0A1W2PQS6 291 aa11.3□□□□□ -0.6
CLK4-205ENST00000520199 A0A1W2PS18 150 aa11.3□□□□□ -0.6
CLK4-205ENST00000520199 NUPR2A6NF83 97 aa11.3□□□□□ -0.6
CLK4-205ENST00000520199 PRSS46E5RG02 174 aa11.3□□□□□ -0.6
CLK4-205ENST00000520199 TOMM40O96008 361 aa11.3□□□□□ -0.6
CLK4-205ENST00000520199 DEFB1P60022 68 aa11.3□□□□□ -0.6
CLK4-205ENST00000520199 LRTM2Q8N967 370 aa11.3□□□□□ -0.6
CLK4-205ENST00000520199 C17orf77Q96MU5 243 aa11.3□□□□□ -0.6
CLK4-205ENST00000520199 C11orf68Q9H3H3 251 aaKnown RBP11.3□□□□□ -0.6
CLK4-205ENST00000520199 X6R8D5 127 aa11.3□□□□□ -0.6
CLK4-205ENST00000520199 IL4P05112 153 aa11.29□□□□□ -0.6
CLK4-205ENST00000520199 HNRNPCP07910 306 aaKnown RBP eCLIP11.29□□□□□ -0.6
CLK4-205ENST00000520199 PPP1R1AQ13522 171 aa11.29□□□□□ -0.6
CLK4-205ENST00000520199 PYDC2Q56P42 97 aa11.29□□□□□ -0.6
CLK4-205ENST00000520199 TMEM128Q5BJH2 165 aa11.29□□□□□ -0.6
CLK4-205ENST00000520199 TMED4Q7Z7H5 227 aa11.29□□□□□ -0.6
CLK4-205ENST00000520199 LGI3Q8N145 548 aa11.29□□□□□ -0.6
CLK4-205ENST00000520199 OR51G1Q8NGK1 321 aa11.29□□□□□ -0.6
CLK4-205ENST00000520199 Q8WTZ3 238 aa11.29□□□□□ -0.6
CLK4-205ENST00000520199 RAB40CQ96S21 281 aa11.29□□□□□ -0.6
CLK4-205ENST00000520199 TMEM231Q9H6L2 316 aa11.29□□□□□ -0.6
CLK4-205ENST00000520199 U3KQ87 197 aa11.29□□□□□ -0.6
CLK4-205ENST00000520199 FAM90A26D6RGX4 464 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms