RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 ZNF506Q5JVG8 444 aa11.83□□□□□ -0.52
TRAPPC9-205ENST00000518839 SPNS3Q6ZMD2 512 aa11.83□□□□□ -0.52
TRAPPC9-205ENST00000518839 SSX7Q7RTT5 188 aa11.83□□□□□ -0.52
TRAPPC9-205ENST00000518839 MANBALQ9NQG1 85 aa11.83□□□□□ -0.52
TRAPPC9-205ENST00000518839 GAR1Q9NY12 217 aaKnown RBP11.83□□□□□ -0.52
TRAPPC9-205ENST00000518839 C21orf62Q9NYP8 219 aa11.83□□□□□ -0.52
TRAPPC9-205ENST00000518839 FBXL7Q9UJT9 491 aa11.83□□□□□ -0.52
TRAPPC9-205ENST00000518839 CSPG4Q6UVK1 2322 aa11.82□□□□□ -0.52
TRAPPC9-205ENST00000518839 ELOA3CA0A087WX78 387 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC9-205ENST00000518839 TRBV9A0A0B4J1U6 114 aa11.82□□□□□ -0.52
TRAPPC9-205ENST00000518839 IGHV3-21A0A0B4J1V1 117 aa11.82□□□□□ -0.52
TRAPPC9-205ENST00000518839 SH2D7A6NKC9 451 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC9-205ENST00000518839 COX7A2P2O60397 106 aa11.82□□□□□ -0.52
TRAPPC9-205ENST00000518839 NDUFS6O75380 124 aaKnown RBP11.82□□□□□ -0.52
TRAPPC9-205ENST00000518839 OR2J3O76001 311 aa11.82□□□□□ -0.52
TRAPPC9-205ENST00000518839 CXorf1O96002 111 aa11.82□□□□□ -0.52
TRAPPC9-205ENST00000518839 STAG3L2P0CL84 134 aa11.82□□□□□ -0.52
TRAPPC9-205ENST00000518839 STAG3L3P0CL85 134 aa11.82□□□□□ -0.52
TRAPPC9-205ENST00000518839 SRP14P37108 136 aaKnown RBP11.82□□□□□ -0.52
TRAPPC9-205ENST00000518839 FGF8P55075 233 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC9-205ENST00000518839 SCGB2A2Q13296 93 aa11.82□□□□□ -0.52
TRAPPC9-205ENST00000518839 C19orf54Q5BKX5 351 aa11.82□□□□□ -0.52
TRAPPC9-205ENST00000518839 GCSAMLQ5JQS6 135 aa11.82□□□□□ -0.52
TRAPPC9-205ENST00000518839 TMEM86BQ8N661 226 aa11.82□□□□□ -0.52
TRAPPC9-205ENST00000518839 NECAP1Q8NC96 275 aa11.82□□□□□ -0.52
TRAPPC9-205ENST00000518839 SCRT1Q9BWW7 348 aa11.82□□□□□ -0.52
TRAPPC9-205ENST00000518839 DNAJC4Q9NNZ3 241 aa11.82□□□□□ -0.52
TRAPPC9-205ENST00000518839 ZNF355PQ9NSJ1 428 aa11.82□□□□□ -0.52
TRAPPC9-205ENST00000518839 TECRQ9NZ01 308 aaKnown RBP11.82□□□□□ -0.52
TRAPPC9-205ENST00000518839 FUT9Q9Y231 359 aa11.82□□□□□ -0.52
TRAPPC9-205ENST00000518839 LOC102723971A0A1B0GUV8 181 aa11.81□□□□□ -0.52
TRAPPC9-205ENST00000518839 GNG7O60262 68 aa11.81□□□□□ -0.52
TRAPPC9-205ENST00000518839 NDUFB8O95169 186 aa11.81□□□□□ -0.52
TRAPPC9-205ENST00000518839 BCL2P10415 239 aa11.81□□□□□ -0.52
TRAPPC9-205ENST00000518839 GATA2P23769 480 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC9-205ENST00000518839 PLP1P60201 277 aa11.81□□□□□ -0.52
TRAPPC9-205ENST00000518839 ZNF90Q03938 601 aa11.81□□□□□ -0.52
TRAPPC9-205ENST00000518839 FAM78BQ5VT40 261 aa11.81□□□□□ -0.52
TRAPPC9-205ENST00000518839 LINC00052Q96N35 136 aa11.81□□□□□ -0.52
TRAPPC9-205ENST00000518839 ATP6V0BQ99437 205 aa11.81□□□□□ -0.52
TRAPPC9-205ENST00000518839 TMEM231Q9H6L2 316 aa11.81□□□□□ -0.52
TRAPPC9-205ENST00000518839 GNG13Q9P2W3 67 aa11.81□□□□□ -0.52
TRAPPC9-205ENST00000518839 PSMB11A5LHX3 300 aa11.8□□□□□ -0.52
TRAPPC9-205ENST00000518839 FAM223BA6NKX1 122 aa11.8□□□□□ -0.52
TRAPPC9-205ENST00000518839 LINC01548A6NM66 108 aa11.8□□□□□ -0.52
TRAPPC9-205ENST00000518839 G3V318 75 aa11.8□□□□□ -0.52
TRAPPC9-205ENST00000518839 HSPB1P04792 205 aaKnown RBP11.8□□□□□ -0.52
TRAPPC9-205ENST00000518839 YPEL3P61236 119 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC9-205ENST00000518839 SRSF3P84103 164 aaKnown RBP11.8□□□□□ -0.52
TRAPPC9-205ENST00000518839 HAGHQ16775 308 aa11.8□□□□□ -0.52
TRAPPC9-205ENST00000518839 Q56UQ5 140 aa11.8□□□□□ -0.52
TRAPPC9-205ENST00000518839 C10orf113Q5VZT2 155 aa11.8□□□□□ -0.52
TRAPPC9-205ENST00000518839 S100A7AQ86SG5 101 aa11.8□□□□□ -0.52
TRAPPC9-205ENST00000518839 FAM223AQ8IWN6 122 aa11.8□□□□□ -0.52
TRAPPC9-205ENST00000518839 SEC11CQ9BY50 192 aa11.8□□□□□ -0.52
TRAPPC9-205ENST00000518839 YAE1D1Q9NRH1 226 aa11.8□□□□□ -0.52
TRAPPC9-205ENST00000518839 TMEM160Q9NX00 188 aa11.8□□□□□ -0.52
TRAPPC9-205ENST00000518839 VAX2Q9UIW0 290 aa11.8□□□□□ -0.52
TRAPPC9-205ENST00000518839 GCN1Q92616 2671 aaKnown RBP11.79□□□□□ -0.52
TRAPPC9-205ENST00000518839 F8W036 122 aa11.79□□□□□ -0.52
TRAPPC9-205ENST00000518839 HMGB3O15347 200 aaKnown RBP11.79□□□□□ -0.52
TRAPPC9-205ENST00000518839 TOMM40O96008 361 aa11.79□□□□□ -0.52
TRAPPC9-205ENST00000518839 C8orf88P0DMB2 117 aa11.79□□□□□ -0.52
TRAPPC9-205ENST00000518839 RHOGP84095 191 aa11.79□□□□□ -0.52
TRAPPC9-205ENST00000518839 KRTAP1-1Q07627 177 aa11.79□□□□□ -0.52
TRAPPC9-205ENST00000518839 TIGITQ495A1 244 aa11.79□□□□□ -0.52
TRAPPC9-205ENST00000518839 PQLC2Q6ZP29 291 aa11.79□□□□□ -0.52
TRAPPC9-205ENST00000518839 IQCF2Q8IXL9 164 aa11.79□□□□□ -0.52
TRAPPC9-205ENST00000518839 EEF1AKMT3Q96AZ1 226 aa11.79□□□□□ -0.52
TRAPPC9-205ENST00000518839 TXNDC17Q9BRA2 123 aa11.79□□□□□ -0.52
TRAPPC9-205ENST00000518839 PRSS22Q9GZN4 317 aa11.79□□□□□ -0.52
TRAPPC9-205ENST00000518839 NPFFR1Q9GZQ6 430 aa11.79□□□□□ -0.52
TRAPPC9-205ENST00000518839 SLC35B3Q9H1N7 401 aa11.79□□□□□ -0.52
TRAPPC9-205ENST00000518839 SEPSECSQ9HD40 501 aaKnown RBP11.79□□□□□ -0.52
TRAPPC9-205ENST00000518839 TRBV7-1A0A0A6YYK4 115 aa11.78□□□□□ -0.52
TRAPPC9-205ENST00000518839 HOXA3O43365 443 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC9-205ENST00000518839 HYPMO75409 117 aa11.78□□□□□ -0.52
TRAPPC9-205ENST00000518839 IGKV1-17P01599 117 aa11.78□□□□□ -0.52
TRAPPC9-205ENST00000518839 SFTA3P0C7M3 94 aa11.78□□□□□ -0.52
TRAPPC9-205ENST00000518839 RD3LP0DJH9 198 aa11.78□□□□□ -0.52
TRAPPC9-205ENST00000518839 ARL14EPLP0DKL9 152 aa11.78□□□□□ -0.52
TRAPPC9-205ENST00000518839 BLCAPP62952 87 aa11.78□□□□□ -0.52
TRAPPC9-205ENST00000518839 ICAM4Q14773 271 aa11.78□□□□□ -0.52
TRAPPC9-205ENST00000518839 C15orf32Q32M92 178 aa11.78□□□□□ -0.52
TRAPPC9-205ENST00000518839 C10orf91Q5T1B1 145 aa11.78□□□□□ -0.52
TRAPPC9-205ENST00000518839 OR51G1Q8NGK1 321 aa11.78□□□□□ -0.52
TRAPPC9-205ENST00000518839 TMEM37Q8WXS4 190 aa11.78□□□□□ -0.52
TRAPPC9-205ENST00000518839 TMEM167BQ9NRX6 74 aa11.78□□□□□ -0.52
TRAPPC9-205ENST00000518839 CARHSP1Q9Y2V2 147 aaKnown RBP11.78□□□□□ -0.52
TRAPPC9-205ENST00000518839 ARL2-SNX15V9GYD0 113 aa11.78□□□□□ -0.52
TRAPPC9-205ENST00000518839 UNC79Q9P2D8 2635 aa11.77□□□□□ -0.52
TRAPPC9-205ENST00000518839 PSG1P11464 419 aa11.77□□□□□ -0.53
TRAPPC9-205ENST00000518839 GCHFRP30047 84 aa11.77□□□□□ -0.53
TRAPPC9-205ENST00000518839 PPIFP30405 207 aaKnown RBP11.77□□□□□ -0.53
TRAPPC9-205ENST00000518839 S100A7P31151 101 aa11.77□□□□□ -0.53
TRAPPC9-205ENST00000518839 ATP5G2Q06055 141 aa11.77□□□□□ -0.53
TRAPPC9-205ENST00000518839 MIR17HGQ75NE6 70 aa11.77□□□□□ -0.53
TRAPPC9-205ENST00000518839 SIGLECL1Q8N7X8 197 aa11.77□□□□□ -0.53
TRAPPC9-205ENST00000518839 STXBP6Q8NFX7 210 aa11.77□□□□□ -0.53
TRAPPC9-205ENST00000518839 OR1B1Q8NGR6 318 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms