RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 DSCAML1Q8TD84 2053 aa2.92□□□□□ -1.94
HMGB1P23-201ENST00000518743 IGLV4-60A0A075B6I1 120 aa2.91□□□□□ -1.94
HMGB1P23-201ENST00000518743 TRAV8-2A0A0B4J237 113 aa2.91□□□□□ -1.94
HMGB1P23-201ENST00000518743 NBDYA0A0U1RRE5 68 aa2.91□□□□□ -1.94
HMGB1P23-201ENST00000518743 GMNCA6NCL1 334 aa2.91□□□□□ -1.94
HMGB1P23-201ENST00000518743 RBFOX3A6NFN3 312 aa2.91□□□□□ -1.94
HMGB1P23-201ENST00000518743 ODF3BA8MYP8 253 aa2.91□□□□□ -1.94
HMGB1P23-201ENST00000518743 F5H5K5 113 aa2.91□□□□□ -1.94
HMGB1P23-201ENST00000518743 NDUFB2O95178 105 aa2.91□□□□□ -1.94
HMGB1P23-201ENST00000518743 SERPINA1P01009 418 aa2.91□□□□□ -1.94
HMGB1P23-201ENST00000518743 IGHG2P01859 326 aa2.91□□□□□ -1.94
HMGB1P23-201ENST00000518743 HLA-AP01891 365 aaKnown RBP2.91□□□□□ -1.94
HMGB1P23-201ENST00000518743 HLA-DQB1P01920 261 aa2.91□□□□□ -1.94
HMGB1P23-201ENST00000518743 TFF1P04155 84 aa2.91□□□□□ -1.94
HMGB1P23-201ENST00000518743 OCM2P0CE71 109 aa2.91□□□□□ -1.94
HMGB1P23-201ENST00000518743 MUC1P15941 1255 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P23-201ENST00000518743 CCL3L1P16619 93 aa2.91□□□□□ -1.94
HMGB1P23-201ENST00000518743 HLA-DMBP28068 263 aa2.91□□□□□ -1.94
HMGB1P23-201ENST00000518743 TSPOP30536 169 aa2.91□□□□□ -1.94
HMGB1P23-201ENST00000518743 CD200P41217 278 aa2.91□□□□□ -1.94
HMGB1P23-201ENST00000518743 MAGEA2P43356 314 aa2.91□□□□□ -1.94
HMGB1P23-201ENST00000518743 GABRA2P47869 451 aa2.91□□□□□ -1.94
HMGB1P23-201ENST00000518743 LGALS7P47929 136 aa2.91□□□□□ -1.94
HMGB1P23-201ENST00000518743 DLX6P56179 175 aa2.91□□□□□ -1.94
HMGB1P23-201ENST00000518743 COPZ1P61923 177 aa2.91□□□□□ -1.94
HMGB1P23-201ENST00000518743 PSG4Q00888 419 aa2.91□□□□□ -1.94
HMGB1P23-201ENST00000518743 MINOS1Q5TGZ0 78 aa2.91□□□□□ -1.94
HMGB1P23-201ENST00000518743 TEX36Q5VZQ5 186 aa2.91□□□□□ -1.94
HMGB1P23-201ENST00000518743 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P23-201ENST00000518743 OLIG3Q7RTU3 272 aa2.91□□□□□ -1.94
HMGB1P23-201ENST00000518743 ZNF561Q8N587 486 aa2.91□□□□□ -1.94
HMGB1P23-201ENST00000518743 C5orf56Q8N8D9 126 aa2.91□□□□□ -1.94
HMGB1P23-201ENST00000518743 OR5L1Q8NGL2 311 aa2.91□□□□□ -1.94
HMGB1P23-201ENST00000518743 OR52N1Q8NH53 320 aa2.91□□□□□ -1.94
HMGB1P23-201ENST00000518743 OR5K1Q8NHB7 308 aa2.91□□□□□ -1.94
HMGB1P23-201ENST00000518743 MFSD8Q8NHS3 518 aa2.91□□□□□ -1.94
HMGB1P23-201ENST00000518743 FAAP24Q9BTP7 215 aa2.91□□□□□ -1.94
HMGB1P23-201ENST00000518743 ADAT1Q9BUB4 502 aaKnown RBP2.91□□□□□ -1.94
HMGB1P23-201ENST00000518743 DERL2Q9GZP9 239 aa2.91□□□□□ -1.94
HMGB1P23-201ENST00000518743 C19orf12Q9NSK7 152 aa2.91□□□□□ -1.94
HMGB1P23-201ENST00000518743 VPS29Q9UBQ0 182 aa2.91□□□□□ -1.94
HMGB1P23-201ENST00000518743 NDUFAF1Q9Y375 327 aa2.91□□□□□ -1.94
HMGB1P23-201ENST00000518743 MINOS1-NBL1R4GNA1 71 aa2.91□□□□□ -1.94
HMGB1P23-201ENST00000518743 DEFB131BA0A096LNP1 70 aa2.9□□□□□ -1.95
HMGB1P23-201ENST00000518743 SMLR1H3BR10 107 aa2.9□□□□□ -1.95
HMGB1P23-201ENST00000518743 RGS5O15539 181 aa2.9□□□□□ -1.95
HMGB1P23-201ENST00000518743 IL4P05112 153 aa2.9□□□□□ -1.95
HMGB1P23-201ENST00000518743 PIPP12273 146 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P23-201ENST00000518743 HIST1H1CP16403 213 aaKnown RBP2.9□□□□□ -1.95
HMGB1P23-201ENST00000518743 PSMB8P28062 276 aa2.9□□□□□ -1.95
HMGB1P23-201ENST00000518743 GRPRP30550 384 aa2.9□□□□□ -1.95
HMGB1P23-201ENST00000518743 RCVRNP35243 200 aa2.9□□□□□ -1.95
HMGB1P23-201ENST00000518743 CAV3P56539 151 aa2.9□□□□□ -1.95
HMGB1P23-201ENST00000518743 APOFQ13790 326 aa2.9□□□□□ -1.95
HMGB1P23-201ENST00000518743 ZNF141Q15928 474 aa2.9□□□□□ -1.95
HMGB1P23-201ENST00000518743 SSX1Q16384 188 aa2.9□□□□□ -1.95
HMGB1P23-201ENST00000518743 ACTBL2Q562R1 376 aa2.9□□□□□ -1.95
HMGB1P23-201ENST00000518743 LCE1EQ5T753 118 aa2.9□□□□□ -1.95
HMGB1P23-201ENST00000518743 ZFP2Q6ZN57 461 aa2.9□□□□□ -1.95
HMGB1P23-201ENST00000518743 BOD1L2Q8IYS8 172 aa2.9□□□□□ -1.95
HMGB1P23-201ENST00000518743 YIPF6Q96EC8 236 aa2.9□□□□□ -1.95
HMGB1P23-201ENST00000518743 SMIM12Q96EX1 92 aa2.9□□□□□ -1.95
HMGB1P23-201ENST00000518743 KCTD7Q96MP8 289 aa2.9□□□□□ -1.95
HMGB1P23-201ENST00000518743 OR2H1Q9GZK4 316 aa2.9□□□□□ -1.95
HMGB1P23-201ENST00000518743 SLC25A31Q9H0C2 315 aa2.9□□□□□ -1.95
HMGB1P23-201ENST00000518743 C11orf68Q9H3H3 251 aaKnown RBP2.9□□□□□ -1.95
HMGB1P23-201ENST00000518743 KLK12Q9UKR0 248 aa2.9□□□□□ -1.95
HMGB1P23-201ENST00000518743 NOP16Q9Y3C1 178 aaKnown RBP2.9□□□□□ -1.95
HMGB1P23-201ENST00000518743 NEBP20929 6669 aa2.89□□□□□ -1.95
HMGB1P23-201ENST00000518743 A0A096LPI6 279 aa2.89□□□□□ -1.95
HMGB1P23-201ENST00000518743 IQCF6A8MYZ5 107 aa2.89□□□□□ -1.95
HMGB1P23-201ENST00000518743 EFCAB9A8MZ26 197 aa2.89□□□□□ -1.95
HMGB1P23-201ENST00000518743 OR7C2O60412 319 aa2.89□□□□□ -1.95
HMGB1P23-201ENST00000518743 SOX14O95416 240 aa2.89□□□□□ -1.95
HMGB1P23-201ENST00000518743 LGALS1P09382 135 aaKnown RBP2.89□□□□□ -1.95
HMGB1P23-201ENST00000518743 IFI6P09912 130 aa2.89□□□□□ -1.95
HMGB1P23-201ENST00000518743 LINC00869P0C866 280 aa2.89□□□□□ -1.95
HMGB1P23-201ENST00000518743 RD3LP0DJH9 198 aa2.89□□□□□ -1.95
HMGB1P23-201ENST00000518743 NPY1RP25929 384 aa2.89□□□□□ -1.95
HMGB1P23-201ENST00000518743 PYCR1P32322 319 aa2.89□□□□□ -1.95
HMGB1P23-201ENST00000518743 TGM4P49221 684 aa2.89□□□□□ -1.95
HMGB1P23-201ENST00000518743 RWDD2BP57060 319 aa2.89□□□□□ -1.95
HMGB1P23-201ENST00000518743 OR10A3P58181 314 aa2.89□□□□□ -1.95
HMGB1P23-201ENST00000518743 KRTAP10-12P60413 245 aa2.89□□□□□ -1.95
HMGB1P23-201ENST00000518743 HPCAP84074 193 aa2.89□□□□□ -1.95
HMGB1P23-201ENST00000518743 SPIN4Q56A73 249 aa2.89□□□□□ -1.95
HMGB1P23-201ENST00000518743 MRPL2Q5T653 305 aaKnown RBP2.89□□□□□ -1.95
HMGB1P23-201ENST00000518743 Q6P435 159 aa2.89□□□□□ -1.95
HMGB1P23-201ENST00000518743 TIFABQ6ZNK6 161 aa2.89□□□□□ -1.95
HMGB1P23-201ENST00000518743 PDPNQ86YL7 162 aa2.89□□□□□ -1.95
HMGB1P23-201ENST00000518743 OR5D16Q8NGK9 328 aa2.89□□□□□ -1.95
HMGB1P23-201ENST00000518743 OR4A5Q8NH83 315 aa2.89□□□□□ -1.95
HMGB1P23-201ENST00000518743 STAG3L4Q8TBR4 150 aa2.89□□□□□ -1.95
HMGB1P23-201ENST00000518743 DYNLRB2Q8TF09 96 aa2.89□□□□□ -1.95
HMGB1P23-201ENST00000518743 RTN4IP1Q8WWV3 396 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P23-201ENST00000518743 CMTM5Q96DZ9 223 aa2.89□□□□□ -1.95
HMGB1P23-201ENST00000518743 PGLYRP3Q96LB9 341 aa2.89□□□□□ -1.95
HMGB1P23-201ENST00000518743 GAFA1Q96PS6 74 aa2.89□□□□□ -1.95
HMGB1P23-201ENST00000518743 SDF2Q99470 211 aa2.89□□□□□ -1.95
HMGB1P23-201ENST00000518743 RNF5Q99942 180 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms