RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 PSG2P11465 335 aa1.92□□□□□ -2.1
CPNE3-204ENST00000517862 OGNP20774 298 aaKnown RBP1.92□□□□□ -2.1
CPNE3-204ENST00000517862 IL3RAP26951 378 aa1.92□□□□□ -2.1
CPNE3-204ENST00000517862 CMC4P56277 68 aaPredicted RBP1.92□□□□□ -2.1
CPNE3-204ENST00000517862 RWDD2BP57060 319 aa1.92□□□□□ -2.1
CPNE3-204ENST00000517862 SKP2Q13309 424 aa1.92□□□□□ -2.1
CPNE3-204ENST00000517862 RNASE13Q5GAN3 156 aaKnown RBP1.92□□□□□ -2.1
CPNE3-204ENST00000517862 TMEM256Q8N2U0 113 aa1.92□□□□□ -2.1
CPNE3-204ENST00000517862 LRRC18Q8N456 261 aa1.92□□□□□ -2.1
CPNE3-204ENST00000517862 CYB561D1Q8N8Q1 229 aa1.92□□□□□ -2.1
CPNE3-204ENST00000517862 LFNGQ8NES3 379 aa1.92□□□□□ -2.1
CPNE3-204ENST00000517862 OR4P4Q8NGL7 312 aa1.92□□□□□ -2.1
CPNE3-204ENST00000517862 ENKURQ8TC29 256 aa1.92□□□□□ -2.1
CPNE3-204ENST00000517862 CD200R1Q8TD46 325 aa1.92□□□□□ -2.1
CPNE3-204ENST00000517862 NELFBQ8WX92 580 aa1.92□□□□□ -2.1
CPNE3-204ENST00000517862 GAFA1Q96PS6 74 aa1.92□□□□□ -2.1
CPNE3-204ENST00000517862 PARD6GQ9BYG4 376 aaPredicted RBP1.92□□□□□ -2.1
CPNE3-204ENST00000517862 NSRP1Q9H0G5 558 aaKnown RBP1.92□□□□□ -2.1
CPNE3-204ENST00000517862 IFI27L2Q9H2X8 130 aa1.92□□□□□ -2.1
CPNE3-204ENST00000517862 IGHV2-26A0A0B4J1V2 119 aa1.91□□□□□ -2.1
CPNE3-204ENST00000517862 IGHV3-72A0A0B4J1Y9 119 aa1.91□□□□□ -2.1
CPNE3-204ENST00000517862 A0A1B0GXF2 115 aa1.91□□□□□ -2.1
CPNE3-204ENST00000517862 TMEM223A0PJW6 202 aa1.91□□□□□ -2.1
CPNE3-204ENST00000517862 LRCOL1A6NCL2 159 aa1.91□□□□□ -2.1
CPNE3-204ENST00000517862 C17orf98A8MV24 154 aa1.91□□□□□ -2.1
CPNE3-204ENST00000517862 TAAR5O14804 337 aa1.91□□□□□ -2.1
CPNE3-204ENST00000517862 TCAPO15273 167 aa1.91□□□□□ -2.1
CPNE3-204ENST00000517862 ENTPD6O75354 484 aa1.91□□□□□ -2.1
CPNE3-204ENST00000517862 YIF1AO95070 293 aa1.91□□□□□ -2.1
CPNE3-204ENST00000517862 S1PR2O95136 353 aa1.91□□□□□ -2.1
CPNE3-204ENST00000517862 SPART-AS1P0CW21 52 aa1.91□□□□□ -2.1
CPNE3-204ENST00000517862 PSKH1P11801 424 aa1.91□□□□□ -2.1
CPNE3-204ENST00000517862 SERPINB1P30740 379 aa1.91□□□□□ -2.1
CPNE3-204ENST00000517862 LGALS7P47929 136 aa1.91□□□□□ -2.1
CPNE3-204ENST00000517862 RPL14P50914 215 aaKnown RBP1.91□□□□□ -2.1
CPNE3-204ENST00000517862 ZNF133P52736 654 aaPredicted RBP1.91□□□□□ -2.1
CPNE3-204ENST00000517862 DEFB116Q30KQ4 102 aa1.91□□□□□ -2.1
CPNE3-204ENST00000517862 RSBN1Q5VWQ0 802 aaPredicted RBP1.91□□□□□ -2.1
CPNE3-204ENST00000517862 LCN8Q6JVE9 175 aa1.91□□□□□ -2.1
CPNE3-204ENST00000517862 MED27Q6P2C8 311 aa1.91□□□□□ -2.1
CPNE3-204ENST00000517862 MORN3Q6PF18 240 aaPredicted RBP1.91□□□□□ -2.1
CPNE3-204ENST00000517862 ANGPTL5Q86XS5 388 aa1.91□□□□□ -2.1
CPNE3-204ENST00000517862 TCTEX1D1Q8N7M0 179 aa1.91□□□□□ -2.1
CPNE3-204ENST00000517862 ZNF565Q8N9K5 539 aa1.91□□□□□ -2.1
CPNE3-204ENST00000517862 GATD1Q8NB37 220 aa1.91□□□□□ -2.1
CPNE3-204ENST00000517862 OR10G2Q8NGC3 310 aa1.91□□□□□ -2.1
CPNE3-204ENST00000517862 OR5AK3PQ8NH89 298 aa1.91□□□□□ -2.1
CPNE3-204ENST00000517862 OR1L1Q8NH94 360 aa1.91□□□□□ -2.1
CPNE3-204ENST00000517862 C12orf43Q96C57 262 aaKnown RBP1.91□□□□□ -2.1
CPNE3-204ENST00000517862 FXYD5Q96DB9 178 aa1.91□□□□□ -2.1
CPNE3-204ENST00000517862 PPP1R2P1Q96PQ5 205 aa1.91□□□□□ -2.1
CPNE3-204ENST00000517862 LINC01587Q99440 93 aa1.91□□□□□ -2.1
CPNE3-204ENST00000517862 GPR22Q99680 433 aa1.91□□□□□ -2.1
CPNE3-204ENST00000517862 APOL4Q9BPW4 351 aa1.91□□□□□ -2.1
CPNE3-204ENST00000517862 MARVELD1Q9BSK0 173 aa1.91□□□□□ -2.1
CPNE3-204ENST00000517862 UPK3BQ9BT76 320 aa1.91□□□□□ -2.1
CPNE3-204ENST00000517862 RSG1Q9BU20 258 aa1.91□□□□□ -2.1
CPNE3-204ENST00000517862 ZNF426Q9BUY5 554 aa1.91□□□□□ -2.1
CPNE3-204ENST00000517862 MRPL20Q9BYC9 149 aaKnown RBP1.91□□□□□ -2.1
CPNE3-204ENST00000517862 SLC25A31Q9H0C2 315 aa1.91□□□□□ -2.1
CPNE3-204ENST00000517862 SND1-IT1Q9HBX3 110 aa1.91□□□□□ -2.1
CPNE3-204ENST00000517862 HMG20AQ9NP66 347 aa1.91□□□□□ -2.1
CPNE3-204ENST00000517862 EXOSC4Q9NPD3 245 aaKnown RBP1.91□□□□□ -2.1
CPNE3-204ENST00000517862 PRR34Q9NV39 138 aa1.91□□□□□ -2.1
CPNE3-204ENST00000517862 TMEM38BQ9NVV0 291 aa1.91□□□□□ -2.1
CPNE3-204ENST00000517862 TAS2R5Q9NYW4 299 aa1.91□□□□□ -2.1
CPNE3-204ENST00000517862 PRO0628Q9UI54 55 aa1.91□□□□□ -2.1
CPNE3-204ENST00000517862 TIMM22Q9Y584 194 aa1.91□□□□□ -2.1
CPNE3-204ENST00000517862 FLGP20930 4061 aaPredicted RBP1.91□□□□□ -2.1
CPNE3-204ENST00000517862 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.9□□□□□ -2.11
CPNE3-204ENST00000517862 A0A0A6YYH2 397 aa1.9□□□□□ -2.11
CPNE3-204ENST00000517862 TRAV41A0A0B4J266 112 aa1.9□□□□□ -2.11
CPNE3-204ENST00000517862 A0A1B0GTI1 187 aa1.9□□□□□ -2.11
CPNE3-204ENST00000517862 A6NJ64 397 aa1.9□□□□□ -2.11
CPNE3-204ENST00000517862 EFCAB9A8MZ26 197 aa1.9□□□□□ -2.11
CPNE3-204ENST00000517862 UPK1AO00322 258 aa1.9□□□□□ -2.11
CPNE3-204ENST00000517862 UBDO15205 165 aa1.9□□□□□ -2.11
CPNE3-204ENST00000517862 PSCAO43653 123 aa1.9□□□□□ -2.11
CPNE3-204ENST00000517862 IGKV1D-33P01593 117 aa1.9□□□□□ -2.11
CPNE3-204ENST00000517862 IGKV1-33P01594 117 aa1.9□□□□□ -2.11
CPNE3-204ENST00000517862 HLA-DQB1P01920 261 aa1.9□□□□□ -2.11
CPNE3-204ENST00000517862 ORM1P02763 201 aa1.9□□□□□ -2.11
CPNE3-204ENST00000517862 REG1AP05451 166 aa1.9□□□□□ -2.11
CPNE3-204ENST00000517862 CDK1P06493 297 aa1.9□□□□□ -2.11
CPNE3-204ENST00000517862 S100A6P06703 90 aa1.9□□□□□ -2.11
CPNE3-204ENST00000517862 SPRR2DP22532 72 aa1.9□□□□□ -2.11
CPNE3-204ENST00000517862 KDELR1P24390 212 aa1.9□□□□□ -2.11
CPNE3-204ENST00000517862 MPIP34949 423 aa1.9□□□□□ -2.11
CPNE3-204ENST00000517862 PRSS3P35030 304 aa1.9□□□□□ -2.11
CPNE3-204ENST00000517862 HBG1P69891 147 aa1.9□□□□□ -2.11
CPNE3-204ENST00000517862 HBG2P69892 147 aa1.9□□□□□ -2.11
CPNE3-204ENST00000517862 BAXQ07812 192 aa1.9□□□□□ -2.11
CPNE3-204ENST00000517862 OR8G1Q15617 311 aa1.9□□□□□ -2.11
CPNE3-204ENST00000517862 TMEM241Q24JQ0 296 aa1.9□□□□□ -2.11
CPNE3-204ENST00000517862 PAGE2Q7Z2X7 111 aa1.9□□□□□ -2.11
CPNE3-204ENST00000517862 LINC01551Q86U37 167 aa1.9□□□□□ -2.11
CPNE3-204ENST00000517862 PDPNQ86YL7 162 aa1.9□□□□□ -2.11
CPNE3-204ENST00000517862 MSRB3Q8IXL7 192 aa1.9□□□□□ -2.11
CPNE3-204ENST00000517862 OR5T1Q8NG75 326 aa1.9□□□□□ -2.11
CPNE3-204ENST00000517862 EXOSC8Q96B26 276 aaKnown RBP1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms