RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 TCF24Q7RTU0 167 aa7.82□□□□□ -1.16
PDGFRB-203ENST00000517660 WFDC3Q8IUB2 231 aa7.82□□□□□ -1.16
PDGFRB-203ENST00000517660 TMEM230Q96A57 120 aa7.82□□□□□ -1.16
PDGFRB-203ENST00000517660 ZFAND3Q9H8U3 227 aa7.82□□□□□ -1.16
PDGFRB-203ENST00000517660 MCUBQ9NWR8 336 aa7.82□□□□□ -1.16
PDGFRB-203ENST00000517660 MRPL36Q9P0J6 103 aaKnown RBP7.82□□□□□ -1.16
PDGFRB-203ENST00000517660 DNAH11Q96DT5 4516 aa7.82□□□□□ -1.16
PDGFRB-203ENST00000517660 HSPG2P98160 4391 aa7.81□□□□□ -1.16
PDGFRB-203ENST00000517660 IGKV3-7A0A075B6H7 116 aa7.81□□□□□ -1.16
PDGFRB-203ENST00000517660 A0A1B0GU03 582 aa7.81□□□□□ -1.16
PDGFRB-203ENST00000517660 A0A1W2PS18 150 aa7.81□□□□□ -1.16
PDGFRB-203ENST00000517660 CEBPZOSA8MTT3 80 aa7.81□□□□□ -1.16
PDGFRB-203ENST00000517660 DFFBO76075 338 aa7.81□□□□□ -1.16
PDGFRB-203ENST00000517660 APOHP02749 345 aaPredicted RBP7.81□□□□□ -1.16
PDGFRB-203ENST00000517660 SULT1A3P0DMM9 295 aa7.81□□□□□ -1.16
PDGFRB-203ENST00000517660 SULT1A4P0DMN0 295 aa7.81□□□□□ -1.16
PDGFRB-203ENST00000517660 RPL35AP18077 110 aaKnown RBP7.81□□□□□ -1.16
PDGFRB-203ENST00000517660 NPPCP23582 126 aa7.81□□□□□ -1.16
PDGFRB-203ENST00000517660 IFITM3Q01628 133 aa7.81□□□□□ -1.16
PDGFRB-203ENST00000517660 OXA1LQ15070 435 aa7.81□□□□□ -1.16
PDGFRB-203ENST00000517660 C2orf83Q53S99 150 aa7.81□□□□□ -1.16
PDGFRB-203ENST00000517660 NOXA1Q86UR1 476 aa7.81□□□□□ -1.16
PDGFRB-203ENST00000517660 APRG1Q8IVJ8 170 aa7.81□□□□□ -1.16
PDGFRB-203ENST00000517660 LILRB2Q8N423 598 aa7.81□□□□□ -1.16
PDGFRB-203ENST00000517660 GBGT1Q8N5D6 347 aa7.81□□□□□ -1.16
PDGFRB-203ENST00000517660 RNASEH2CQ8TDP1 164 aaKnown RBP7.81□□□□□ -1.16
PDGFRB-203ENST00000517660 ST8SIA2Q92186 375 aa7.81□□□□□ -1.16
PDGFRB-203ENST00000517660 RNF183Q96D59 192 aa7.81□□□□□ -1.16
PDGFRB-203ENST00000517660 TMEM231Q9H6L2 316 aa7.81□□□□□ -1.16
PDGFRB-203ENST00000517660 MAP6D1Q9H9H5 199 aa7.81□□□□□ -1.16
PDGFRB-203ENST00000517660 DNAH6Q9C0G6 4158 aa7.81□□□□□ -1.16
PDGFRB-203ENST00000517660 TRAV2A0A0B4J234 112 aa7.8□□□□□ -1.16
PDGFRB-203ENST00000517660 A0A0B4J2A0 478 aa7.8□□□□□ -1.16
PDGFRB-203ENST00000517660 DNASE2O00115 360 aaPredicted RBP7.8□□□□□ -1.16
PDGFRB-203ENST00000517660 PTTG1O95997 202 aa7.8□□□□□ -1.16
PDGFRB-203ENST00000517660 IGKV1-17P01599 117 aa7.8□□□□□ -1.16
PDGFRB-203ENST00000517660 SLC25A4P12235 298 aa7.8□□□□□ -1.16
PDGFRB-203ENST00000517660 ANXA3P12429 323 aa7.8□□□□□ -1.16
PDGFRB-203ENST00000517660 AKR1C4P17516 323 aa7.8□□□□□ -1.16
PDGFRB-203ENST00000517660 FAUP35544 74 aaKnown RBP7.8□□□□□ -1.16
PDGFRB-203ENST00000517660 CCR6P51684 374 aa7.8□□□□□ -1.16
PDGFRB-203ENST00000517660 AP3S2P59780 193 aa7.8□□□□□ -1.16
PDGFRB-203ENST00000517660 SRPXP78539 464 aa7.8□□□□□ -1.16
PDGFRB-203ENST00000517660 DEFB135Q30KP9 77 aa7.8□□□□□ -1.16
PDGFRB-203ENST00000517660 TIGITQ495A1 244 aa7.8□□□□□ -1.16
PDGFRB-203ENST00000517660 PYDC2Q56P42 97 aa7.8□□□□□ -1.16
PDGFRB-203ENST00000517660 NMSQ5H8A3 153 aa7.8□□□□□ -1.16
PDGFRB-203ENST00000517660 ETFRF1Q6IPR1 90 aa7.8□□□□□ -1.16
PDGFRB-203ENST00000517660 LGI3Q8N145 548 aa7.8□□□□□ -1.16
PDGFRB-203ENST00000517660 RPP25LQ8N5L8 163 aaKnown RBP7.8□□□□□ -1.16
PDGFRB-203ENST00000517660 SLC24A4Q8NFF2 622 aa7.8□□□□□ -1.16
PDGFRB-203ENST00000517660 PPP1R14BQ96C90 147 aa7.8□□□□□ -1.16
PDGFRB-203ENST00000517660 METTL26Q96S19 204 aa7.8□□□□□ -1.16
PDGFRB-203ENST00000517660 CSTL1Q9H114 145 aa7.8□□□□□ -1.16
PDGFRB-203ENST00000517660 MS4A6AQ9H2W1 248 aa7.8□□□□□ -1.16
PDGFRB-203ENST00000517660 SHPKQ9UHJ6 478 aa7.8□□□□□ -1.16
PDGFRB-203ENST00000517660 V9GYH0 126 aa7.8□□□□□ -1.16
PDGFRB-203ENST00000517660 PIGBOS1A0A0B4J2F0 54 aa7.79□□□□□ -1.16
PDGFRB-203ENST00000517660 IGHV3-66A0A0C4DH42 116 aa7.79□□□□□ -1.16
PDGFRB-203ENST00000517660 MPTX1A8MV57 137 aa7.79□□□□□ -1.16
PDGFRB-203ENST00000517660 CRYBB3P26998 211 aa7.79□□□□□ -1.16
PDGFRB-203ENST00000517660 BCAP31P51572 246 aa7.79□□□□□ -1.16
PDGFRB-203ENST00000517660 YPEL3P61236 119 aaPredicted RBP7.79□□□□□ -1.16
PDGFRB-203ENST00000517660 RPL11P62913 178 aaKnown RBP7.79□□□□□ -1.16
PDGFRB-203ENST00000517660 SUPT4H1P63272 117 aaKnown RBP7.79□□□□□ -1.16
PDGFRB-203ENST00000517660 TNFRSF9Q07011 255 aa7.79□□□□□ -1.16
PDGFRB-203ENST00000517660 KLF9Q13886 244 aaPredicted RBP7.79□□□□□ -1.16
PDGFRB-203ENST00000517660 SMCO1Q147U7 214 aa7.79□□□□□ -1.16
PDGFRB-203ENST00000517660 TRIQKQ629K1 86 aa7.79□□□□□ -1.16
PDGFRB-203ENST00000517660 PRSS54Q6PEW0 395 aa7.79□□□□□ -1.16
PDGFRB-203ENST00000517660 LYZL2Q7Z4W2 148 aa7.79□□□□□ -1.16
PDGFRB-203ENST00000517660 TOMM5Q8N4H5 51 aa7.79□□□□□ -1.16
PDGFRB-203ENST00000517660 OR1S2Q8NGQ3 325 aa7.79□□□□□ -1.16
PDGFRB-203ENST00000517660 Q8WTZ3 238 aa7.79□□□□□ -1.16
PDGFRB-203ENST00000517660 NARS2Q96I59 477 aaKnown RBP7.79□□□□□ -1.16
PDGFRB-203ENST00000517660 SRRQ9GZT4 340 aa7.79□□□□□ -1.16
PDGFRB-203ENST00000517660 PRR13Q9NZ81 148 aa7.79□□□□□ -1.16
PDGFRB-203ENST00000517660 DNAH17Q9UFH2 4485 aa7.78□□□□□ -1.16
PDGFRB-203ENST00000517660 A0A0J9YWU9 116 aa7.78□□□□□ -1.16
PDGFRB-203ENST00000517660 IFNA10P01566 189 aa7.78□□□□□ -1.16
PDGFRB-203ENST00000517660 IGLC1P0CG04 106 aa7.78□□□□□ -1.16
PDGFRB-203ENST00000517660 ATF4P18848 351 aaPredicted RBP7.78□□□□□ -1.16
PDGFRB-203ENST00000517660 NPY1RP25929 384 aa7.78□□□□□ -1.16
PDGFRB-203ENST00000517660 OR10J1P30954 320 aa7.78□□□□□ -1.16
PDGFRB-203ENST00000517660 RND2P52198 227 aa7.78□□□□□ -1.16
PDGFRB-203ENST00000517660 ATP5IP56385 69 aaPredicted RBP7.78□□□□□ -1.16
PDGFRB-203ENST00000517660 ZNF124Q15973 351 aa7.78□□□□□ -1.16
PDGFRB-203ENST00000517660 LYG2Q86SG7 212 aa7.78□□□□□ -1.16
PDGFRB-203ENST00000517660 TMEM170AQ8WVE7 144 aa7.78□□□□□ -1.16
PDGFRB-203ENST00000517660 DEDD2Q8WXF8 326 aa7.78□□□□□ -1.16
PDGFRB-203ENST00000517660 GRAMD2BQ96HH9 432 aa7.78□□□□□ -1.16
PDGFRB-203ENST00000517660 SDHCQ99643 169 aaPredicted RBP7.78□□□□□ -1.16
PDGFRB-203ENST00000517660 HSPB7Q9UBY9 170 aa7.78□□□□□ -1.16
PDGFRB-203ENST00000517660 U3KQ87 197 aa7.78□□□□□ -1.16
PDGFRB-203ENST00000517660 NXPH3O95157 252 aa7.77□□□□□ -1.17
PDGFRB-203ENST00000517660 HNRNPCP07910 306 aaKnown RBP eCLIP7.77□□□□□ -1.17
PDGFRB-203ENST00000517660 IL7P13232 177 aa7.77□□□□□ -1.17
PDGFRB-203ENST00000517660 P2RY1P47900 373 aa7.77□□□□□ -1.17
PDGFRB-203ENST00000517660 INPP1P49441 399 aa7.77□□□□□ -1.17
PDGFRB-203ENST00000517660 DEFB131AP59861 70 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms