RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 CELSR3Q9NYQ7 3312 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 MYO18BQ8IUG5 2567 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 TRPM6Q9BX84 2022 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 BPTFQ12830 3046 aa1.83□□□□□ -2.12
HERC4-215ENST00000515753 LOC400499M0QZD8 3231 aa1.82□□□□□ -2.12
HERC4-215ENST00000515753 COL27A1Q8IZC6 1860 aaPredicted RBP1.82□□□□□ -2.12
HERC4-215ENST00000515753 CEP192Q8TEP8 1941 aa1.82□□□□□ -2.12
HERC4-215ENST00000515753 IGLV4-60A0A075B6I1 120 aa1.82□□□□□ -2.12
HERC4-215ENST00000515753 ZNF860A6NHJ4 632 aa1.82□□□□□ -2.12
HERC4-215ENST00000515753 C4orf51C9J302 202 aa1.82□□□□□ -2.12
HERC4-215ENST00000515753 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.82□□□□□ -2.12
HERC4-215ENST00000515753 BHLHE40O14503 412 aa1.82□□□□□ -2.12
HERC4-215ENST00000515753 APOMO95445 188 aa1.82□□□□□ -2.12
HERC4-215ENST00000515753 IGHG2P01859 326 aa1.82□□□□□ -2.12
HERC4-215ENST00000515753 OPN1SWP03999 348 aa1.82□□□□□ -2.12
HERC4-215ENST00000515753 CD7P09564 240 aa1.82□□□□□ -2.12
HERC4-215ENST00000515753 OR4E1P0C645 316 aa1.82□□□□□ -2.12
HERC4-215ENST00000515753 CGB3P0DN86 165 aa1.82□□□□□ -2.12
HERC4-215ENST00000515753 CGB7P0DN87 165 aa1.82□□□□□ -2.12
HERC4-215ENST00000515753 CRYGSP22914 178 aa1.82□□□□□ -2.12
HERC4-215ENST00000515753 GNG10P50151 68 aa1.82□□□□□ -2.12
HERC4-215ENST00000515753 TMEM33P57088 247 aa1.82□□□□□ -2.12
HERC4-215ENST00000515753 FGF12P61328 243 aa1.82□□□□□ -2.12
HERC4-215ENST00000515753 CAV1Q03135 178 aa1.82□□□□□ -2.12
HERC4-215ENST00000515753 KRR1Q13601 381 aaKnown RBP1.82□□□□□ -2.12
HERC4-215ENST00000515753 SNCBQ16143 134 aa1.82□□□□□ -2.12
HERC4-215ENST00000515753 LIN52Q52LA3 116 aa1.82□□□□□ -2.12
HERC4-215ENST00000515753 LINC00483Q53H64 154 aa1.82□□□□□ -2.12
HERC4-215ENST00000515753 ZNF880Q6PDB4 577 aa1.82□□□□□ -2.12
HERC4-215ENST00000515753 DHRS4L2Q6PKH6 230 aa1.82□□□□□ -2.12
HERC4-215ENST00000515753 SLC36A1Q7Z2H8 476 aa1.82□□□□□ -2.12
HERC4-215ENST00000515753 ZNF695Q8IW36 515 aa1.82□□□□□ -2.12
HERC4-215ENST00000515753 C20orf196Q8IYI0 205 aa1.82□□□□□ -2.12
HERC4-215ENST00000515753 OR51D1Q8NGF3 324 aa1.82□□□□□ -2.12
HERC4-215ENST00000515753 OR2D3Q8NGH3 330 aa1.82□□□□□ -2.12
HERC4-215ENST00000515753 STAG3L4Q8TBR4 150 aa1.82□□□□□ -2.12
HERC4-215ENST00000515753 ZNF721Q8TF20 911 aa1.82□□□□□ -2.12
HERC4-215ENST00000515753 OR5P3Q8WZ94 311 aa1.82□□□□□ -2.12
HERC4-215ENST00000515753 MAGOHBQ96A72 148 aaKnown RBP1.82□□□□□ -2.12
HERC4-215ENST00000515753 PHB2Q99623 299 aa1.82□□□□□ -2.12
HERC4-215ENST00000515753 SPIN2AQ99865 258 aa1.82□□□□□ -2.12
HERC4-215ENST00000515753 SPIN2BQ9BPZ2 258 aa1.82□□□□□ -2.12
HERC4-215ENST00000515753 C1QTNF6Q9BXI9 259 aa1.82□□□□□ -2.12
HERC4-215ENST00000515753 PLA2G12AQ9BZM1 189 aa1.82□□□□□ -2.12
HERC4-215ENST00000515753 NKX6-2Q9C056 277 aaPredicted RBP1.82□□□□□ -2.12
HERC4-215ENST00000515753 GABARAPL1Q9H0R8 117 aa1.82□□□□□ -2.12
HERC4-215ENST00000515753 RPUSD1Q9UJJ7 312 aaKnown RBP1.82□□□□□ -2.12
HERC4-215ENST00000515753 PRELID3BQ9Y3B1 194 aa1.82□□□□□ -2.12
HERC4-215ENST00000515753 MRPS16Q9Y3D3 137 aaKnown RBP1.82□□□□□ -2.12
HERC4-215ENST00000515753 KNL1Q8NG31 2342 aa1.82□□□□□ -2.12
HERC4-215ENST00000515753 AKAP13Q12802 2813 aa1.81□□□□□ -2.12
HERC4-215ENST00000515753 WDFY3Q8IZQ1 3526 aa1.81□□□□□ -2.12
HERC4-215ENST00000515753 SDK2Q58EX2 2172 aa1.81□□□□□ -2.12
HERC4-215ENST00000515753 IGHV3OR16-8A0A075B7F1 116 aa1.81□□□□□ -2.12
HERC4-215ENST00000515753 IGHV1-69-2A0A0G2JMI3 117 aa1.81□□□□□ -2.12
HERC4-215ENST00000515753 LINC00862A6NCI5 91 aa1.81□□□□□ -2.12
HERC4-215ENST00000515753 OR4C45A6NMZ5 311 aa1.81□□□□□ -2.12
HERC4-215ENST00000515753 ZNF729A6NN14 1252 aaPredicted RBP1.81□□□□□ -2.12
HERC4-215ENST00000515753 ZNF878C9JN71 531 aa1.81□□□□□ -2.12
HERC4-215ENST00000515753 H3BQF6 201 aa1.81□□□□□ -2.12
HERC4-215ENST00000515753 M0R381 172 aa1.81□□□□□ -2.12
HERC4-215ENST00000515753 GSTZ1O43708 216 aaPredicted RBP1.81□□□□□ -2.12
HERC4-215ENST00000515753 OR7C1O76099 320 aaPredicted RBP1.81□□□□□ -2.12
HERC4-215ENST00000515753 CNIH1O95406 144 aa1.81□□□□□ -2.12
HERC4-215ENST00000515753 STATHP02808 62 aa1.81□□□□□ -2.12
HERC4-215ENST00000515753 CCL3P10147 92 aa1.81□□□□□ -2.12
HERC4-215ENST00000515753 SLC25A16P16260 332 aa1.81□□□□□ -2.12
HERC4-215ENST00000515753 CCL1P22362 96 aa1.81□□□□□ -2.12
HERC4-215ENST00000515753 FKBP2P26885 142 aaKnown RBP1.81□□□□□ -2.12
HERC4-215ENST00000515753 ATP6V0CP27449 155 aa1.81□□□□□ -2.12
HERC4-215ENST00000515753 CD34P28906 385 aa1.81□□□□□ -2.12
HERC4-215ENST00000515753 CRABP2P29373 138 aa1.81□□□□□ -2.12
HERC4-215ENST00000515753 SSR2P43308 183 aa1.81□□□□□ -2.12
HERC4-215ENST00000515753 MAP2K4P45985 399 aa1.81□□□□□ -2.12
HERC4-215ENST00000515753 DSCR4P56555 118 aaPredicted RBP1.81□□□□□ -2.12
HERC4-215ENST00000515753 FABP9Q0Z7S8 132 aa1.81□□□□□ -2.12
HERC4-215ENST00000515753 CDK10Q15131 360 aa1.81□□□□□ -2.12
HERC4-215ENST00000515753 IAH1Q2TAA2 248 aaPredicted RBP1.81□□□□□ -2.12
HERC4-215ENST00000515753 SLC25A34Q6PIV7 304 aa1.81□□□□□ -2.12
HERC4-215ENST00000515753 TBPL2Q6SJ96 375 aa1.81□□□□□ -2.12
HERC4-215ENST00000515753 Q6ZQT7 251 aa1.81□□□□□ -2.12
HERC4-215ENST00000515753 LYZL2Q7Z4W2 148 aa1.81□□□□□ -2.12
HERC4-215ENST00000515753 BPIFB6Q8NFQ5 453 aa1.81□□□□□ -2.12
HERC4-215ENST00000515753 OR4X1Q8NH49 305 aa1.81□□□□□ -2.12
HERC4-215ENST00000515753 LHFPL5Q8TAF8 219 aa1.81□□□□□ -2.12
HERC4-215ENST00000515753 C1orf54Q8WWF1 131 aa1.81□□□□□ -2.12
HERC4-215ENST00000515753 MUCL1Q96DR8 90 aa1.81□□□□□ -2.12
HERC4-215ENST00000515753 SLC25A44Q96H78 314 aaPredicted RBP1.81□□□□□ -2.12
HERC4-215ENST00000515753 SERPINI1Q99574 410 aa1.81□□□□□ -2.12
HERC4-215ENST00000515753 TBX5Q99593 518 aa1.81□□□□□ -2.12
HERC4-215ENST00000515753 SIGMAR1Q99720 223 aa1.81□□□□□ -2.12
HERC4-215ENST00000515753 CMSS1Q9BQ75 279 aaKnown RBP1.81□□□□□ -2.12
HERC4-215ENST00000515753 TSSK6Q9BXA6 273 aa1.81□□□□□ -2.12
HERC4-215ENST00000515753 REG4Q9BYZ8 158 aa1.81□□□□□ -2.12
HERC4-215ENST00000515753 CXorf21Q9HAI6 301 aa1.81□□□□□ -2.12
HERC4-215ENST00000515753 MRPL27Q9P0M9 148 aaKnown RBP1.81□□□□□ -2.12
HERC4-215ENST00000515753 OPTCQ9UBM4 332 aa1.81□□□□□ -2.12
HERC4-215ENST00000515753 AK3Q9UIJ7 227 aa1.81□□□□□ -2.12
HERC4-215ENST00000515753 MCTS1Q9ULC4 181 aaKnown RBP1.81□□□□□ -2.12
HERC4-215ENST00000515753 CARHSP1Q9Y2V2 147 aaKnown RBP1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms