RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 CCDC140Q96MF4 163 aa15.49■□□□□ 0.07
USP53-208ENST00000514305 MCRIP2Q9BUT9 160 aaKnown RBP15.49■□□□□ 0.07
USP53-208ENST00000514305 S4R3C0 116 aa15.49■□□□□ 0.07
USP53-208ENST00000514305 IGHV4OR15-8A0A075B7B6 117 aa15.48■□□□□ 0.07
USP53-208ENST00000514305 A0A087WW49 117 aa15.48■□□□□ 0.07
USP53-208ENST00000514305 OR2T8A6NH00 312 aa15.48■□□□□ 0.07
USP53-208ENST00000514305 FNDC10F2Z333 226 aa15.48■□□□□ 0.07
USP53-208ENST00000514305 TMEM50AO95807 157 aa15.48■□□□□ 0.07
USP53-208ENST00000514305 S100A11P31949 105 aa15.48■□□□□ 0.07
USP53-208ENST00000514305 SULT1A1P50225 295 aa15.48■□□□□ 0.07
USP53-208ENST00000514305 BAXQ07812 192 aa15.48■□□□□ 0.07
USP53-208ENST00000514305 DEFB136Q30KP8 78 aa15.48■□□□□ 0.07
USP53-208ENST00000514305 TMEM170AQ8WVE7 144 aa15.48■□□□□ 0.07
USP53-208ENST00000514305 FNDC4Q9H6D8 234 aaPredicted RBP15.48■□□□□ 0.07
USP53-208ENST00000514305 FAM24AA6NFZ4 105 aa15.47■□□□□ 0.07
USP53-208ENST00000514305 HOXD3P31249 432 aaPredicted RBP15.47■□□□□ 0.07
USP53-208ENST00000514305 KRTAP10-11P60412 298 aa15.47■□□□□ 0.07
USP53-208ENST00000514305 DLK1P80370 383 aa15.47■□□□□ 0.07
USP53-208ENST00000514305 EGFEM1PQ0D2K5 195 aa15.47■□□□□ 0.07
USP53-208ENST00000514305 FHL3Q13643 280 aa15.47■□□□□ 0.07
USP53-208ENST00000514305 ATP6V1FQ16864 119 aa15.47■□□□□ 0.07
USP53-208ENST00000514305 C11orf87Q6NUJ2 197 aa15.47■□□□□ 0.07
USP53-208ENST00000514305 TMEM252Q8N6L7 170 aa15.47■□□□□ 0.07
USP53-208ENST00000514305 OR1S2Q8NGQ3 325 aa15.47■□□□□ 0.07
USP53-208ENST00000514305 ACY3Q96HD9 319 aa15.47■□□□□ 0.07
USP53-208ENST00000514305 C11orf1Q9H5F2 150 aa15.47■□□□□ 0.07
USP53-208ENST00000514305 ZC4H2Q9NQZ6 224 aa15.47■□□□□ 0.07
USP53-208ENST00000514305 RND2P52198 227 aa15.46■□□□□ 0.07
USP53-208ENST00000514305 GPHB5Q86YW7 130 aa15.46■□□□□ 0.07
USP53-208ENST00000514305 LILRB2Q8N423 598 aa15.46■□□□□ 0.07
USP53-208ENST00000514305 OR2T35Q8NGX2 323 aa15.46■□□□□ 0.07
USP53-208ENST00000514305 ELOVL1Q9BW60 279 aa15.46■□□□□ 0.07
USP53-208ENST00000514305 NPVFQ9HCQ7 196 aa15.46■□□□□ 0.07
USP53-208ENST00000514305 OR5AC2Q9NZP5 309 aa15.46■□□□□ 0.07
USP53-208ENST00000514305 PEMTQ9UBM1 199 aa15.46■□□□□ 0.07
USP53-208ENST00000514305 WI2-2373I1.2A0A1W2PRP0 233 aa15.45■□□□□ 0.06
USP53-208ENST00000514305 PPP5D1E7EU14 171 aa15.45■□□□□ 0.06
USP53-208ENST00000514305 BMPR1BO00238 502 aa15.45■□□□□ 0.06
USP53-208ENST00000514305 IGHV3-48P01763 117 aa15.45■□□□□ 0.06
USP53-208ENST00000514305 AKR1C1Q04828 323 aa15.45■□□□□ 0.06
USP53-208ENST00000514305 NPIPB3Q92617 1050 aa15.45■□□□□ 0.06
USP53-208ENST00000514305 WDR89Q96FK6 387 aaPredicted RBP15.45■□□□□ 0.06
USP53-208ENST00000514305 MBD2Q9UBB5 411 aa15.45■□□□□ 0.06
USP53-208ENST00000514305 ZMAT5Q9UDW3 170 aaKnown RBP15.45■□□□□ 0.06
USP53-208ENST00000514305 SMCO3A2RU48 225 aa15.44■□□□□ 0.06
USP53-208ENST00000514305 ZFP92A6NM28 416 aa15.44■□□□□ 0.06
USP53-208ENST00000514305 OVOL1O14753 267 aa15.44■□□□□ 0.06
USP53-208ENST00000514305 CTSGP08311 255 aa15.44■□□□□ 0.06
USP53-208ENST00000514305 LYL1P12980 280 aa15.44■□□□□ 0.06
USP53-208ENST00000514305 OR10J1P30954 320 aa15.44■□□□□ 0.06
USP53-208ENST00000514305 SLC38A11Q08AI6 406 aa15.44■□□□□ 0.06
USP53-208ENST00000514305 GAMTQ14353 236 aa15.44■□□□□ 0.06
USP53-208ENST00000514305 MLANAQ16655 118 aa15.44■□□□□ 0.06
USP53-208ENST00000514305 ZNF600Q6ZNG1 722 aa15.44■□□□□ 0.06
USP53-208ENST00000514305 INO80EQ8NBZ0 244 aaPredicted RBP15.44■□□□□ 0.06
USP53-208ENST00000514305 Q8WTZ3 238 aa15.44■□□□□ 0.06
USP53-208ENST00000514305 DUX3Q96PT4 197 aa15.44■□□□□ 0.06
USP53-208ENST00000514305 RNF126Q9BV68 326 aa15.44■□□□□ 0.06
USP53-208ENST00000514305 PMS2P5A8MQ11 134 aa15.43■□□□□ 0.06
USP53-208ENST00000514305 H0YIZ8 118 aa15.43■□□□□ 0.06
USP53-208ENST00000514305 LGALS9O00182 355 aa15.43■□□□□ 0.06
USP53-208ENST00000514305 NDUFA4O00483 81 aa15.43■□□□□ 0.06
USP53-208ENST00000514305 CST7O76096 145 aa15.43■□□□□ 0.06
USP53-208ENST00000514305 OR2C1O95371 312 aa15.43■□□□□ 0.06
USP53-208ENST00000514305 TRBV12-3P01733 135 aa15.43■□□□□ 0.06
USP53-208ENST00000514305 RPL12P30050 165 aaKnown RBP15.43■□□□□ 0.06
USP53-208ENST00000514305 RAB31Q13636 194 aa15.43■□□□□ 0.06
USP53-208ENST00000514305 KLF5Q13887 457 aaPredicted RBP15.43■□□□□ 0.06
USP53-208ENST00000514305 ACOT7LQ6ZUV0 252 aa15.43■□□□□ 0.06
USP53-208ENST00000514305 TMEM144Q7Z5S9 345 aa15.43■□□□□ 0.06
USP53-208ENST00000514305 UFC1Q9Y3C8 167 aa15.43■□□□□ 0.06
USP53-208ENST00000514305 PRSS46E5RG02 174 aa15.42■□□□□ 0.06
USP53-208ENST00000514305 CFDP00746 253 aaPredicted RBP15.42■□□□□ 0.06
USP53-208ENST00000514305 SLURP1P55000 103 aa15.42■□□□□ 0.06
USP53-208ENST00000514305 YPEL3P61236 119 aaPredicted RBP15.42■□□□□ 0.06
USP53-208ENST00000514305 EWSR1Q01844 656 aaKnown RBP eCLIP15.42■□□□□ 0.06
USP53-208ENST00000514305 TMEM217Q8N7C4 229 aa15.42■□□□□ 0.06
USP53-208ENST00000514305 CHAC2Q8WUX2 184 aa15.42■□□□□ 0.06
USP53-208ENST00000514305 GINS3Q9BRX5 216 aa15.42■□□□□ 0.06
USP53-208ENST00000514305 ZNF320A2RRD8 509 aa15.41■□□□□ 0.06
USP53-208ENST00000514305 F8W735 103 aaPredicted RBP15.41■□□□□ 0.06
USP53-208ENST00000514305 CCNKO75909 580 aa15.41■□□□□ 0.06
USP53-208ENST00000514305 YIF1AO95070 293 aa15.41■□□□□ 0.06
USP53-208ENST00000514305 S100A7P31151 101 aa15.41■□□□□ 0.06
USP53-208ENST00000514305 ELLP55199 621 aaPredicted RBP15.41■□□□□ 0.06
USP53-208ENST00000514305 SYNJ2BPP57105 145 aa15.41■□□□□ 0.06
USP53-208ENST00000514305 TEPPQ6URK8 271 aa15.41■□□□□ 0.06
USP53-208ENST00000514305 ZNF546Q86UE3 836 aa15.41■□□□□ 0.06
USP53-208ENST00000514305 DLX4Q92988 240 aaPredicted RBP15.41■□□□□ 0.06
USP53-208ENST00000514305 TRGV9Q99603 122 aa15.41■□□□□ 0.06
USP53-208ENST00000514305 TMEM147Q9BVK8 224 aa15.41■□□□□ 0.06
USP53-208ENST00000514305 UQCC1Q9NVA1 299 aa15.41■□□□□ 0.06
USP53-208ENST00000514305 hCG_2014768A0A024R1R8 64 aa15.4■□□□□ 0.06
USP53-208ENST00000514305 IGSF23A1L1A6 192 aa15.4■□□□□ 0.06
USP53-208ENST00000514305 DFFBO76075 338 aa15.4■□□□□ 0.06
USP53-208ENST00000514305 IGLC1P0CG04 106 aa15.4■□□□□ 0.06
USP53-208ENST00000514305 BMI1P35226 326 aa15.4■□□□□ 0.06
USP53-208ENST00000514305 INSL3P51460 131 aa15.4■□□□□ 0.06
USP53-208ENST00000514305 THAP8Q8NA92 274 aa15.4■□□□□ 0.06
USP53-208ENST00000514305 CHRDL1Q9BU40 450 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms