RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 LTBP4Q8N2S1 1624 aa7.38□□□□□ -1.23
VCAN-208ENST00000512590 TIAF1O95411 115 aa7.38□□□□□ -1.23
VCAN-208ENST00000512590 SAA4P35542 130 aa7.38□□□□□ -1.23
VCAN-208ENST00000512590 PAQR4Q8N4S7 273 aaPredicted RBP7.38□□□□□ -1.23
VCAN-208ENST00000512590 ZC2HC1AQ96GY0 325 aa7.38□□□□□ -1.23
VCAN-208ENST00000512590 SPCS1Q9Y6A9 102 aa7.38□□□□□ -1.23
VCAN-208ENST00000512590 K7ERS5 55 aa7.38□□□□□ -1.23
VCAN-208ENST00000512590 C14orf177Q52M58 125 aa7.38□□□□□ -1.23
VCAN-208ENST00000512590 MIXL1Q9H2W2 232 aa7.38□□□□□ -1.23
VCAN-208ENST00000512590 CRYBG1Q9Y4K1 1723 aa7.38□□□□□ -1.23
VCAN-208ENST00000512590 KNCNA6PVL3 124 aa7.38□□□□□ -1.23
VCAN-208ENST00000512590 IGKV1-5P01602 117 aa7.38□□□□□ -1.23
VCAN-208ENST00000512590 EGR2P11161 476 aaPredicted RBP7.38□□□□□ -1.23
VCAN-208ENST00000512590 LINC00477Q96M19 166 aa7.38□□□□□ -1.23
VCAN-208ENST00000512590 A0A0A6YYD4 124 aa7.37□□□□□ -1.23
VCAN-208ENST00000512590 IGHV1-18A0A0C4DH31 117 aa7.37□□□□□ -1.23
VCAN-208ENST00000512590 SNRPEP62304 92 aaKnown RBP7.37□□□□□ -1.23
VCAN-208ENST00000512590 LYZL4Q96KX0 146 aa7.37□□□□□ -1.23
VCAN-208ENST00000512590 MYH1P12882 1939 aa7.37□□□□□ -1.23
VCAN-208ENST00000512590 IQCF6A8MYZ5 107 aa7.37□□□□□ -1.23
VCAN-208ENST00000512590 F2Z2F3 143 aa7.37□□□□□ -1.23
VCAN-208ENST00000512590 NCR2O95944 276 aa7.37□□□□□ -1.23
VCAN-208ENST00000512590 IGHV1-46P01743 117 aa7.37□□□□□ -1.23
VCAN-208ENST00000512590 Q6ZQT7 251 aa7.37□□□□□ -1.23
VCAN-208ENST00000512590 FUNDC1Q8IVP5 155 aa7.37□□□□□ -1.23
VCAN-208ENST00000512590 TRAF4Q9BUZ4 470 aaPredicted RBP7.37□□□□□ -1.23
VCAN-208ENST00000512590 SAA2-SAA4A0A096LPE2 208 aa7.37□□□□□ -1.23
VCAN-208ENST00000512590 IGHV1-69DA0A0B4J2H0 117 aa7.37□□□□□ -1.23
VCAN-208ENST00000512590 IGHV1-69P01742 117 aa7.37□□□□□ -1.23
VCAN-208ENST00000512590 SAA2P0DJI9 122 aaPredicted RBP7.37□□□□□ -1.23
VCAN-208ENST00000512590 C9orf47Q6ZRZ4 202 aa7.37□□□□□ -1.23
VCAN-208ENST00000512590 IGLV3-16A0A075B6K0 115 aa7.37□□□□□ -1.23
VCAN-208ENST00000512590 NPIPB13A6NJU9 1138 aa7.37□□□□□ -1.23
VCAN-208ENST00000512590 NPIPB5A8MRT5 1133 aa7.37□□□□□ -1.23
VCAN-208ENST00000512590 PFN1P07737 140 aaKnown RBP7.37□□□□□ -1.23
VCAN-208ENST00000512590 RNF144BQ7Z419 303 aa7.37□□□□□ -1.23
VCAN-208ENST00000512590 COQ2Q96H96 371 aa7.37□□□□□ -1.23
VCAN-208ENST00000512590 CTSGP08311 255 aa7.37□□□□□ -1.23
VCAN-208ENST00000512590 PEBP1P30086 187 aaKnown RBP7.37□□□□□ -1.23
VCAN-208ENST00000512590 NCMAPQ5T1S8 102 aa7.37□□□□□ -1.23
VCAN-208ENST00000512590 CADM3Q8N126 398 aa7.37□□□□□ -1.23
VCAN-208ENST00000512590 SSBP4Q9BWG4 385 aaPredicted RBP7.37□□□□□ -1.23
VCAN-208ENST00000512590 TRBV9A0A0B4J1U6 114 aa7.36□□□□□ -1.23
VCAN-208ENST00000512590 GAGE2AQ6NT46 116 aa7.36□□□□□ -1.23
VCAN-208ENST00000512590 ZAR1Q86SH2 424 aa7.36□□□□□ -1.23
VCAN-208ENST00000512590 DPM2O94777 84 aa7.36□□□□□ -1.23
VCAN-208ENST00000512590 NRTNQ99748 197 aa7.36□□□□□ -1.23
VCAN-208ENST00000512590 HMSDA8MTL9 139 aa7.36□□□□□ -1.23
VCAN-208ENST00000512590 C12orf77C9JDV5 145 aa7.36□□□□□ -1.23
VCAN-208ENST00000512590 ZFP36P26651 326 aaKnown RBP7.36□□□□□ -1.23
VCAN-208ENST00000512590 PSG3Q16557 428 aa7.36□□□□□ -1.23
VCAN-208ENST00000512590 TSKUQ8WUA8 353 aa7.36□□□□□ -1.23
VCAN-208ENST00000512590 MRPL36Q9P0J6 103 aaKnown RBP7.36□□□□□ -1.23
VCAN-208ENST00000512590 CLDN16Q9Y5I7 305 aa7.36□□□□□ -1.23
VCAN-208ENST00000512590 IGKV2-40A0A087WW87 121 aaPredicted RBP7.36□□□□□ -1.23
VCAN-208ENST00000512590 TEX22C9J3V5 150 aa7.36□□□□□ -1.23
VCAN-208ENST00000512590 CCL24O00175 119 aa7.36□□□□□ -1.23
VCAN-208ENST00000512590 CDC42EP2O14613 210 aa7.36□□□□□ -1.23
VCAN-208ENST00000512590 CGAP01215 116 aa7.36□□□□□ -1.23
VCAN-208ENST00000512590 IGKV2D-40P01614 121 aaPredicted RBP7.36□□□□□ -1.23
VCAN-208ENST00000512590 CTAG1AP78358 180 aa7.36□□□□□ -1.23
VCAN-208ENST00000512590 TMEM155Q4W5P6 130 aa7.36□□□□□ -1.23
VCAN-208ENST00000512590 ATP5L2Q7Z4Y8 100 aa7.36□□□□□ -1.23
VCAN-208ENST00000512590 ATOH7Q8N100 152 aa7.36□□□□□ -1.23
VCAN-208ENST00000512590 CAMK2N2Q96S95 79 aa7.36□□□□□ -1.23
VCAN-208ENST00000512590 PSG8Q9UQ74 426 aa7.36□□□□□ -1.23
VCAN-208ENST00000512590 SNAI2O43623 268 aa7.35□□□□□ -1.23
VCAN-208ENST00000512590 IGF2P01344 180 aa7.35□□□□□ -1.23
VCAN-208ENST00000512590 MDKP21741 143 aaPredicted RBP7.35□□□□□ -1.23
VCAN-208ENST00000512590 GPHA2Q96T91 129 aa7.35□□□□□ -1.23
VCAN-208ENST00000512590 A0A087WWL8 130 aa7.35□□□□□ -1.23
VCAN-208ENST00000512590 IGKV1-39P01597 117 aa7.35□□□□□ -1.23
VCAN-208ENST00000512590 IGKV1D-39P04432 117 aa7.35□□□□□ -1.23
VCAN-208ENST00000512590 NIT1Q86X76 327 aa7.35□□□□□ -1.23
VCAN-208ENST00000512590 SPRR3Q9UBC9 169 aa7.35□□□□□ -1.23
VCAN-208ENST00000512590 DOT1LQ8TEK3 1739 aa7.35□□□□□ -1.23
VCAN-208ENST00000512590 NDUFA4O00483 81 aa7.35□□□□□ -1.23
VCAN-208ENST00000512590 GALP22466 123 aa7.35□□□□□ -1.23
VCAN-208ENST00000512590 PLA2G5P39877 138 aa7.35□□□□□ -1.23
VCAN-208ENST00000512590 HAMPP81172 84 aa7.35□□□□□ -1.23
VCAN-208ENST00000512590 PDE4DIPQ5VU43 2346 aa7.35□□□□□ -1.23
VCAN-208ENST00000512590 LRP6O75581 1613 aa7.35□□□□□ -1.23
VCAN-208ENST00000512590 ASXL3Q9C0F0 2248 aa7.35□□□□□ -1.23
VCAN-208ENST00000512590 A0A087X0M5 115 aa7.35□□□□□ -1.23
VCAN-208ENST00000512590 A0A0G2JMM0 328 aa7.35□□□□□ -1.23
VCAN-208ENST00000512590 A0A1B0GX30 115 aa7.35□□□□□ -1.23
VCAN-208ENST00000512590 A0A1W2PPB8 328 aa7.35□□□□□ -1.23
VCAN-208ENST00000512590 A0A1W2PRS3 328 aa7.35□□□□□ -1.23
VCAN-208ENST00000512590 KIR3DP1A8MWS1 328 aa7.35□□□□□ -1.23
VCAN-208ENST00000512590 SOCS3O14543 225 aa7.35□□□□□ -1.23
VCAN-208ENST00000512590 GNG5P63218 68 aa7.35□□□□□ -1.23
VCAN-208ENST00000512590 SMIM8Q96KF7 97 aa7.35□□□□□ -1.23
VCAN-208ENST00000512590 MGST2Q99735 147 aa7.35□□□□□ -1.23
VCAN-208ENST00000512590 TMEM14BQ9NUH8 114 aa7.35□□□□□ -1.23
VCAN-208ENST00000512590 A0A1W2PR77 199 aa7.34□□□□□ -1.23
VCAN-208ENST00000512590 RS1O15537 224 aa7.34□□□□□ -1.23
VCAN-208ENST00000512590 HLA-DQB1P01920 261 aa7.34□□□□□ -1.23
VCAN-208ENST00000512590 CRYBB2P43320 205 aa7.34□□□□□ -1.23
VCAN-208ENST00000512590 DYNAPQ8N1N2 210 aa7.34□□□□□ -1.23
VCAN-208ENST00000512590 TIMM21Q9BVV7 248 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms