RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 ATP6V0E1O15342 81 aa7.15□□□□□ -1.26
NR1I3-228ENST00000511676 NDUFA7O95182 113 aa7.15□□□□□ -1.26
NR1I3-228ENST00000511676 PRH1P02810 166 aa7.15□□□□□ -1.26
NR1I3-228ENST00000511676 AMY1AP04745 511 aa7.15□□□□□ -1.26
NR1I3-228ENST00000511676 S100A1P23297 94 aa7.15□□□□□ -1.26
NR1I3-228ENST00000511676 PAX6P26367 422 aa7.15□□□□□ -1.26
NR1I3-228ENST00000511676 NPBWR1P48145 328 aa7.15□□□□□ -1.26
NR1I3-228ENST00000511676 MFAP2P55001 183 aa7.15□□□□□ -1.26
NR1I3-228ENST00000511676 TMEM182Q6ZP80 229 aaPredicted RBP7.15□□□□□ -1.26
NR1I3-228ENST00000511676 Q6ZRG5 221 aa7.15□□□□□ -1.26
NR1I3-228ENST00000511676 REC114Q7Z4M0 266 aa7.15□□□□□ -1.26
NR1I3-228ENST00000511676 S100A7AQ86SG5 101 aa7.15□□□□□ -1.26
NR1I3-228ENST00000511676 FAM223AQ8IWN6 122 aa7.15□□□□□ -1.26
NR1I3-228ENST00000511676 RBMXL1Q96E39 390 aaKnown RBP7.15□□□□□ -1.26
NR1I3-228ENST00000511676 CXorf58Q96LI9 332 aa7.15□□□□□ -1.26
NR1I3-228ENST00000511676 FANCD2OSQ96PS1 177 aa7.15□□□□□ -1.26
NR1I3-228ENST00000511676 RNF2Q99496 336 aa7.15□□□□□ -1.26
NR1I3-228ENST00000511676 MGST2Q99735 147 aa7.15□□□□□ -1.26
NR1I3-228ENST00000511676 HSPB9Q9BQS6 159 aa7.15□□□□□ -1.26
NR1I3-228ENST00000511676 SMDT1Q9H4I9 107 aa7.15□□□□□ -1.26
NR1I3-228ENST00000511676 SLC45A2Q9UMX9 530 aa7.15□□□□□ -1.26
NR1I3-228ENST00000511676 TET2Q6N021 2002 aaPredicted RBP7.15□□□□□ -1.27
NR1I3-228ENST00000511676 TRAV41A0A0B4J266 112 aa7.14□□□□□ -1.27
NR1I3-228ENST00000511676 CTXND1A0A1B0GTU2 59 aa7.14□□□□□ -1.27
NR1I3-228ENST00000511676 TCRBV4S1A1TA0A5B7 111 aa7.14□□□□□ -1.27
NR1I3-228ENST00000511676 CLPSL1A2RUU4 121 aa7.14□□□□□ -1.27
NR1I3-228ENST00000511676 K7EIM0 57 aa7.14□□□□□ -1.27
NR1I3-228ENST00000511676 MT-CO2P00403 227 aa7.14□□□□□ -1.27
NR1I3-228ENST00000511676 H2AFB1P0C5Y9 115 aa7.14□□□□□ -1.27
NR1I3-228ENST00000511676 TNCP24821 2201 aa7.14□□□□□ -1.27
NR1I3-228ENST00000511676 PPT1P50897 306 aa7.14□□□□□ -1.27
NR1I3-228ENST00000511676 PLP1P60201 277 aa7.14□□□□□ -1.27
NR1I3-228ENST00000511676 B2MP61769 119 aa7.14□□□□□ -1.27
NR1I3-228ENST00000511676 FFAR4Q5NUL3 377 aa7.14□□□□□ -1.27
NR1I3-228ENST00000511676 SLC35E3Q7Z769 313 aa7.14□□□□□ -1.27
NR1I3-228ENST00000511676 NECAP1Q8NC96 275 aa7.14□□□□□ -1.27
NR1I3-228ENST00000511676 FAM213BQ8TBF2 198 aa7.14□□□□□ -1.27
NR1I3-228ENST00000511676 GATAD1Q8WUU5 269 aa7.14□□□□□ -1.27
NR1I3-228ENST00000511676 TMEM190Q8WZ59 177 aa7.14□□□□□ -1.27
NR1I3-228ENST00000511676 MARC2Q969Z3 335 aa7.14□□□□□ -1.27
NR1I3-228ENST00000511676 MISP3Q96FF7 219 aa7.14□□□□□ -1.27
NR1I3-228ENST00000511676 PFDN5Q99471 154 aa7.14□□□□□ -1.27
NR1I3-228ENST00000511676 ACTR3CQ9C0K3 210 aaPredicted RBP7.14□□□□□ -1.27
NR1I3-228ENST00000511676 NPFFR1Q9GZQ6 430 aa7.14□□□□□ -1.27
NR1I3-228ENST00000511676 RPRMQ9NS64 109 aa7.14□□□□□ -1.27
NR1I3-228ENST00000511676 SLC39A9Q9NUM3 307 aa7.14□□□□□ -1.27
NR1I3-228ENST00000511676 DMRT1Q9Y5R6 373 aa7.14□□□□□ -1.27
NR1I3-228ENST00000511676 PXMP4Q9Y6I8 212 aa7.14□□□□□ -1.27
NR1I3-228ENST00000511676 IGKV1OR2-108A0A075B7D4 117 aa7.13□□□□□ -1.27
NR1I3-228ENST00000511676 ELOA3CA0A087WX78 387 aaPredicted RBP7.13□□□□□ -1.27
NR1I3-228ENST00000511676 MFSD2BA6NFX1 497 aa7.13□□□□□ -1.27
NR1I3-228ENST00000511676 ATP6V1G1O75348 118 aa7.13□□□□□ -1.27
NR1I3-228ENST00000511676 CLN5O75503 358 aa7.13□□□□□ -1.27
NR1I3-228ENST00000511676 IGHV4-59P01825 116 aa7.13□□□□□ -1.27
NR1I3-228ENST00000511676 REG1AP05451 166 aa7.13□□□□□ -1.27
NR1I3-228ENST00000511676 RND2P52198 227 aa7.13□□□□□ -1.27
NR1I3-228ENST00000511676 MFAP4P55083 255 aa7.13□□□□□ -1.27
NR1I3-228ENST00000511676 ZNF616Q08AN1 781 aa7.13□□□□□ -1.27
NR1I3-228ENST00000511676 UNQ5815/PRO19632Q6UWF5 114 aa7.13□□□□□ -1.27
NR1I3-228ENST00000511676 CYP2G1PQ6ZSU1 146 aa7.13□□□□□ -1.27
NR1I3-228ENST00000511676 COMMD7Q86VX2 200 aa7.13□□□□□ -1.27
NR1I3-228ENST00000511676 TMEM219Q86XT9 240 aa7.13□□□□□ -1.27
NR1I3-228ENST00000511676 Q8N2B8 174 aa7.13□□□□□ -1.27
NR1I3-228ENST00000511676 RPP25LQ8N5L8 163 aaKnown RBP7.13□□□□□ -1.27
NR1I3-228ENST00000511676 STPG3Q8N7X2 389 aa7.13□□□□□ -1.27
NR1I3-228ENST00000511676 OR10G4Q8NGN3 311 aa7.13□□□□□ -1.27
NR1I3-228ENST00000511676 OR10G9Q8NGN4 311 aa7.13□□□□□ -1.27
NR1I3-228ENST00000511676 OR10G7Q8NGN6 311 aa7.13□□□□□ -1.27
NR1I3-228ENST00000511676 OR1L4Q8NGR5 311 aa7.13□□□□□ -1.27
NR1I3-228ENST00000511676 NPIPB3Q92617 1050 aa7.13□□□□□ -1.27
NR1I3-228ENST00000511676 ACY3Q96HD9 319 aa7.13□□□□□ -1.27
NR1I3-228ENST00000511676 RCC1LQ96I51 464 aaKnown RBP7.13□□□□□ -1.27
NR1I3-228ENST00000511676 PBDC1Q9BVG4 233 aa7.13□□□□□ -1.27
NR1I3-228ENST00000511676 MRPL32Q9BYC8 188 aaKnown RBP7.13□□□□□ -1.27
NR1I3-228ENST00000511676 RNF24Q9Y225 148 aa7.13□□□□□ -1.27
NR1I3-228ENST00000511676 ARL2-SNX15V9GYD0 113 aa7.13□□□□□ -1.27
NR1I3-228ENST00000511676 TRBV7-1A0A0A6YYK4 115 aa7.12□□□□□ -1.27
NR1I3-228ENST00000511676 ZFP92A6NM28 416 aa7.12□□□□□ -1.27
NR1I3-228ENST00000511676 LINC00869P0C866 280 aa7.12□□□□□ -1.27
NR1I3-228ENST00000511676 IGLC1P0CG04 106 aa7.12□□□□□ -1.27
NR1I3-228ENST00000511676 PPIFP30405 207 aaKnown RBP7.12□□□□□ -1.27
NR1I3-228ENST00000511676 OR10J1P30954 320 aa7.12□□□□□ -1.27
NR1I3-228ENST00000511676 S100A7P31151 101 aa7.12□□□□□ -1.27
NR1I3-228ENST00000511676 CDC34P49427 236 aaPredicted RBP7.12□□□□□ -1.27
NR1I3-228ENST00000511676 YPEL3P61236 119 aaPredicted RBP7.12□□□□□ -1.27
NR1I3-228ENST00000511676 RHOBP62745 196 aa7.12□□□□□ -1.27
NR1I3-228ENST00000511676 ACSM6Q6P461 480 aa7.12□□□□□ -1.27
NR1I3-228ENST00000511676 BCL6BQ8N143 479 aaPredicted RBP7.12□□□□□ -1.27
NR1I3-228ENST00000511676 BPIFCQ8NFQ6 507 aa7.12□□□□□ -1.27
NR1I3-228ENST00000511676 SUN5Q8TC36 379 aa7.12□□□□□ -1.27
NR1I3-228ENST00000511676 USMG5Q96IX5 58 aa7.12□□□□□ -1.27
NR1I3-228ENST00000511676 FAM210AQ96ND0 272 aa7.12□□□□□ -1.27
NR1I3-228ENST00000511676 TXNDC17Q9BRA2 123 aa7.12□□□□□ -1.27
NR1I3-228ENST00000511676 FAM103A1Q9BTL3 118 aaKnown RBP7.12□□□□□ -1.27
NR1I3-228ENST00000511676 PRSS22Q9GZN4 317 aa7.12□□□□□ -1.27
NR1I3-228ENST00000511676 ESM1Q9NQ30 184 aa7.12□□□□□ -1.27
NR1I3-228ENST00000511676 TNFRSF19Q9NS68 423 aa7.12□□□□□ -1.27
NR1I3-228ENST00000511676 MGAM2Q2M2H8 2515 aa7.12□□□□□ -1.27
NR1I3-228ENST00000511676 IGKV1D-37A0A075B6S9 117 aa7.11□□□□□ -1.27
NR1I3-228ENST00000511676 A0A1W2PPV4 95 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms