RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 TMBIM4Q9HC24 238 aa3.91□□□□□ -1.78
USP53-206ENST00000510737 PAK1IP1Q9NWT1 392 aaPredicted RBP3.91□□□□□ -1.78
USP53-206ENST00000510737 SDHAF2Q9NX18 166 aa3.91□□□□□ -1.78
USP53-206ENST00000510737 TAS2R4Q9NYW5 299 aa3.91□□□□□ -1.78
USP53-206ENST00000510737 YTHDF2Q9Y5A9 579 aaKnown RBP3.91□□□□□ -1.78
USP53-206ENST00000510737 PUS1Q9Y606 427 aaKnown RBP eCLIP3.91□□□□□ -1.78
USP53-206ENST00000510737 RFNGQ9Y644 331 aa3.91□□□□□ -1.78
USP53-206ENST00000510737 TRAV14DV4A0A0A6YYC5 116 aa3.9□□□□□ -1.79
USP53-206ENST00000510737 TRAV2A0A0B4J234 112 aa3.9□□□□□ -1.79
USP53-206ENST00000510737 HMGB1P1B2RPK0 211 aaPredicted RBP3.9□□□□□ -1.79
USP53-206ENST00000510737 PANO1I0J062 215 aa3.9□□□□□ -1.79
USP53-206ENST00000510737 NUPL2O15504 423 aaKnown RBP3.9□□□□□ -1.79
USP53-206ENST00000510737 CRYZL1O95825 349 aa3.9□□□□□ -1.79
USP53-206ENST00000510737 DHFRP00374 187 aa3.9□□□□□ -1.79
USP53-206ENST00000510737 CTSGP08311 255 aa3.9□□□□□ -1.79
USP53-206ENST00000510737 HTR1AP08908 422 aa3.9□□□□□ -1.79
USP53-206ENST00000510737 DEFA4P12838 97 aa3.9□□□□□ -1.79
USP53-206ENST00000510737 PSMD7P51665 324 aa3.9□□□□□ -1.79
USP53-206ENST00000510737 DAD1P61803 113 aa3.9□□□□□ -1.79
USP53-206ENST00000510737 ATP6AP1Q15904 470 aa3.9□□□□□ -1.79
USP53-206ENST00000510737 VKORC1L1Q8N0U8 176 aa3.9□□□□□ -1.79
USP53-206ENST00000510737 DUSP18Q8NEJ0 188 aa3.9□□□□□ -1.79
USP53-206ENST00000510737 VN1R17PQ8TDU5 208 aa3.9□□□□□ -1.79
USP53-206ENST00000510737 DGCR14Q96DF8 476 aaKnown RBP3.9□□□□□ -1.79
USP53-206ENST00000510737 BSCL2Q96G97 398 aaPredicted RBP3.9□□□□□ -1.79
USP53-206ENST00000510737 OR10C1Q96KK4 312 aa3.9□□□□□ -1.79
USP53-206ENST00000510737 SIKE1Q9BRV8 207 aa3.9□□□□□ -1.79
USP53-206ENST00000510737 TM2D1Q9BX74 207 aa3.9□□□□□ -1.79
USP53-206ENST00000510737 SELENOIQ9C0D9 397 aa3.9□□□□□ -1.79
USP53-206ENST00000510737 MAGT1Q9H0U3 335 aa3.9□□□□□ -1.79
USP53-206ENST00000510737 MRGBPQ9NV56 204 aa3.9□□□□□ -1.79
USP53-206ENST00000510737 ZNF446Q9NWS9 450 aa3.9□□□□□ -1.79
USP53-206ENST00000510737 IGHV3OR16-12A0A075B7B8 117 aa3.89□□□□□ -1.79
USP53-206ENST00000510737 IGHV3-21A0A0B4J1V1 117 aa3.89□□□□□ -1.79
USP53-206ENST00000510737 IGHV3-66A0A0C4DH42 116 aa3.89□□□□□ -1.79
USP53-206ENST00000510737 IGKV1-6A0A0C4DH72 117 aa3.89□□□□□ -1.79
USP53-206ENST00000510737 F5H768 121 aa3.89□□□□□ -1.79
USP53-206ENST00000510737 NAPSAO96009 420 aa3.89□□□□□ -1.79
USP53-206ENST00000510737 RRASP10301 218 aa3.89□□□□□ -1.79
USP53-206ENST00000510737 HSD17B1P14061 328 aa3.89□□□□□ -1.79
USP53-206ENST00000510737 GNRHRP30968 328 aa3.89□□□□□ -1.79
USP53-206ENST00000510737 RPL27AP46776 148 aaKnown RBP3.89□□□□□ -1.79
USP53-206ENST00000510737 CLINT1Q14677 625 aa3.89□□□□□ -1.79
USP53-206ENST00000510737 RTL8BQ17RB0 113 aa3.89□□□□□ -1.79
USP53-206ENST00000510737 FAM220AQ7Z4H9 259 aa3.89□□□□□ -1.79
USP53-206ENST00000510737 CBR4Q8N4T8 237 aa3.89□□□□□ -1.79
USP53-206ENST00000510737 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.89□□□□□ -1.79
USP53-206ENST00000510737 OR6M1Q8NGM8 313 aa3.89□□□□□ -1.79
USP53-206ENST00000510737 FAM104AQ969W3 186 aa3.89□□□□□ -1.79
USP53-206ENST00000510737 PDCD1LG2Q9BQ51 273 aa3.89□□□□□ -1.79
USP53-206ENST00000510737 OR51E2Q9H255 320 aa3.89□□□□□ -1.79
USP53-206ENST00000510737 VSIRQ9H7M9 311 aa3.89□□□□□ -1.79
USP53-206ENST00000510737 TMEM138Q9NPI0 162 aa3.89□□□□□ -1.79
USP53-206ENST00000510737 WARS2Q9UGM6 360 aaKnown RBP3.89□□□□□ -1.79
USP53-206ENST00000510737 J3QLW9 94 aa3.88□□□□□ -1.79
USP53-206ENST00000510737 J3QRE1 110 aa3.88□□□□□ -1.79
USP53-206ENST00000510737 ST8SIA3O43173 380 aa3.88□□□□□ -1.79
USP53-206ENST00000510737 PDCD6O75340 191 aa3.88□□□□□ -1.79
USP53-206ENST00000510737 YIF1AO95070 293 aa3.88□□□□□ -1.79
USP53-206ENST00000510737 PRM2P04554 102 aa3.88□□□□□ -1.79
USP53-206ENST00000510737 ZNF688P0C7X2 276 aa3.88□□□□□ -1.79
USP53-206ENST00000510737 FXYD7P58549 80 aa3.88□□□□□ -1.79
USP53-206ENST00000510737 CBX3Q13185 183 aa3.88□□□□□ -1.79
USP53-206ENST00000510737 GPR176Q14439 515 aa3.88□□□□□ -1.79
USP53-206ENST00000510737 LBHQ53QV2 105 aaPredicted RBP3.88□□□□□ -1.79
USP53-206ENST00000510737 DDI2Q5TDH0 399 aa3.88□□□□□ -1.79
USP53-206ENST00000510737 GLIPR1L1Q6UWM5 242 aa3.88□□□□□ -1.79
USP53-206ENST00000510737 Q6ZSA8 131 aa3.88□□□□□ -1.79
USP53-206ENST00000510737 C6orf201Q7Z4U5 140 aa3.88□□□□□ -1.79
USP53-206ENST00000510737 SETD6Q8TBK2 473 aa3.88□□□□□ -1.79
USP53-206ENST00000510737 PCNPQ8WW12 178 aaKnown RBP3.88□□□□□ -1.79
USP53-206ENST00000510737 DYDC1Q8WWB3 177 aa3.88□□□□□ -1.79
USP53-206ENST00000510737 THTPAQ9BU02 230 aa3.88□□□□□ -1.79
USP53-206ENST00000510737 RDH8Q9NYR8 311 aa3.88□□□□□ -1.79
USP53-206ENST00000510737 RABAC1Q9UI14 185 aa3.88□□□□□ -1.79
USP53-206ENST00000510737 TRAV18A0A075B6X5 111 aa3.87□□□□□ -1.79
USP53-206ENST00000510737 PRSS46E5RG02 174 aa3.87□□□□□ -1.79
USP53-206ENST00000510737 H3BMM0 161 aa3.87□□□□□ -1.79
USP53-206ENST00000510737 CREBL2O60519 120 aaPredicted RBP3.87□□□□□ -1.79
USP53-206ENST00000510737 C1QBP02746 253 aa3.87□□□□□ -1.79
USP53-206ENST00000510737 CD5P06127 495 aa3.87□□□□□ -1.79
USP53-206ENST00000510737 RPSAP08865 295 aaKnown RBP3.87□□□□□ -1.79
USP53-206ENST00000510737 CD3GP09693 182 aa3.87□□□□□ -1.79
USP53-206ENST00000510737 FGF9P31371 208 aaPredicted RBP3.87□□□□□ -1.79
USP53-206ENST00000510737 ATP6V1E1P36543 226 aa3.87□□□□□ -1.79
USP53-206ENST00000510737 ALDH3B2P48448 385 aa3.87□□□□□ -1.79
USP53-206ENST00000510737 TPBGQ13641 420 aa3.87□□□□□ -1.79
USP53-206ENST00000510737 GID4Q8IVV7 300 aa3.87□□□□□ -1.79
USP53-206ENST00000510737 PUSL1Q8N0Z8 303 aaKnown RBP3.87□□□□□ -1.79
USP53-206ENST00000510737 C1orf158Q8N1D5 194 aa3.87□□□□□ -1.79
USP53-206ENST00000510737 OR5AK2Q8NH90 309 aa3.87□□□□□ -1.79
USP53-206ENST00000510737 TMEM167AQ8TBQ9 72 aa3.87□□□□□ -1.79
USP53-206ENST00000510737 DCANP1Q8TF63 244 aa3.87□□□□□ -1.79
USP53-206ENST00000510737 ZNF184Q99676 751 aaPredicted RBP3.87□□□□□ -1.79
USP53-206ENST00000510737 HDHD3Q9BSH5 251 aaPredicted RBP3.87□□□□□ -1.79
USP53-206ENST00000510737 DCUN1D5Q9BTE7 237 aa3.87□□□□□ -1.79
USP53-206ENST00000510737 OR2D2Q9H210 308 aa3.87□□□□□ -1.79
USP53-206ENST00000510737 C21orf62Q9NYP8 219 aa3.87□□□□□ -1.79
USP53-206ENST00000510737 MRPS16Q9Y3D3 137 aaKnown RBP3.87□□□□□ -1.79
USP53-206ENST00000510737 IGLC7A0M8Q6 106 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms