RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 DHRS2Q13268 280 aa11.24□□□□□ -0.61
TPM3-219ENST00000509409 SURF2Q15527 256 aaPredicted RBP11.24□□□□□ -0.61
TPM3-219ENST00000509409 BSXQ3C1V8 233 aa11.24□□□□□ -0.61
TPM3-219ENST00000509409 C2orf83Q53S99 150 aa11.24□□□□□ -0.61
TPM3-219ENST00000509409 RPP25LQ8N5L8 163 aaKnown RBP11.24□□□□□ -0.61
TPM3-219ENST00000509409 DIRAS2Q96HU8 199 aa11.24□□□□□ -0.61
TPM3-219ENST00000509409 GPR132Q9UNW8 380 aa11.24□□□□□ -0.61
TPM3-219ENST00000509409 KCNIP3Q9Y2W7 256 aa11.24□□□□□ -0.61
TPM3-219ENST00000509409 KMT2AQ03164 3969 aa11.24□□□□□ -0.61
TPM3-219ENST00000509409 CRYM-AS1A6NIL9 109 aa11.23□□□□□ -0.61
TPM3-219ENST00000509409 NXPH3O95157 252 aa11.23□□□□□ -0.61
TPM3-219ENST00000509409 HNRNPCP07910 306 aaKnown RBP eCLIP11.23□□□□□ -0.61
TPM3-219ENST00000509409 SLC25A4P12235 298 aa11.23□□□□□ -0.61
TPM3-219ENST00000509409 OR10J1P30954 320 aa11.23□□□□□ -0.61
TPM3-219ENST00000509409 SPCS2Q15005 226 aa11.23□□□□□ -0.61
TPM3-219ENST00000509409 LGALS9CQ6DKI2 356 aa11.23□□□□□ -0.61
TPM3-219ENST00000509409 ETFRF1Q6IPR1 90 aa11.23□□□□□ -0.61
TPM3-219ENST00000509409 PRSS54Q6PEW0 395 aa11.23□□□□□ -0.61
TPM3-219ENST00000509409 NOXA1Q86UR1 476 aa11.23□□□□□ -0.61
TPM3-219ENST00000509409 CLVS1Q8IUQ0 354 aaPredicted RBP11.23□□□□□ -0.61
TPM3-219ENST00000509409 OR4C16Q8NGL9 310 aa11.23□□□□□ -0.61
TPM3-219ENST00000509409 RNASEH2CQ8TDP1 164 aaKnown RBP11.23□□□□□ -0.61
TPM3-219ENST00000509409 C2CD4CQ8TF44 421 aa11.23□□□□□ -0.61
TPM3-219ENST00000509409 SMIM4Q8WVI0 70 aa11.23□□□□□ -0.61
TPM3-219ENST00000509409 PRRT1Q99946 306 aa11.23□□□□□ -0.61
TPM3-219ENST00000509409 HELTA6NFD8 242 aa11.22□□□□□ -0.61
TPM3-219ENST00000509409 DEDDO75618 318 aa11.22□□□□□ -0.61
TPM3-219ENST00000509409 AP2S1P53680 142 aaPredicted RBP11.22□□□□□ -0.61
TPM3-219ENST00000509409 AARDQ4LEZ3 155 aa11.22□□□□□ -0.61
TPM3-219ENST00000509409 TMEM41BQ5BJD5 291 aa11.22□□□□□ -0.61
TPM3-219ENST00000509409 ACTL10Q5JWF8 245 aa11.22□□□□□ -0.61
TPM3-219ENST00000509409 MORN3Q6PF18 240 aaPredicted RBP11.22□□□□□ -0.61
TPM3-219ENST00000509409 TRPT1Q86TN4 253 aaKnown RBP11.22□□□□□ -0.61
TPM3-219ENST00000509409 CENPSQ8N2Z9 138 aa11.22□□□□□ -0.61
TPM3-219ENST00000509409 SLC24A4Q8NFF2 622 aa11.22□□□□□ -0.61
TPM3-219ENST00000509409 OR51S1Q8NGJ8 323 aa11.22□□□□□ -0.61
TPM3-219ENST00000509409 NPIPB3Q92617 1050 aa11.22□□□□□ -0.61
TPM3-219ENST00000509409 SCGB3A2Q96PL1 93 aa11.22□□□□□ -0.61
TPM3-219ENST00000509409 CACFD1Q9UGQ2 172 aa11.22□□□□□ -0.61
TPM3-219ENST00000509409 CTDSPLO15194 276 aa11.21□□□□□ -0.61
TPM3-219ENST00000509409 IFNA10P01566 189 aa11.21□□□□□ -0.61
TPM3-219ENST00000509409 IGLC1P0CG04 106 aa11.21□□□□□ -0.61
TPM3-219ENST00000509409 SULT1A3P0DMM9 295 aa11.21□□□□□ -0.61
TPM3-219ENST00000509409 SULT1A4P0DMN0 295 aa11.21□□□□□ -0.61
TPM3-219ENST00000509409 SPP1P10451 314 aa11.21□□□□□ -0.61
TPM3-219ENST00000509409 NPY1RP25929 384 aa11.21□□□□□ -0.61
TPM3-219ENST00000509409 ALDH3B2P48448 385 aa11.21□□□□□ -0.61
TPM3-219ENST00000509409 YPEL3P61236 119 aaPredicted RBP11.21□□□□□ -0.61
TPM3-219ENST00000509409 C16orf54Q6UWD8 224 aa11.21□□□□□ -0.61
TPM3-219ENST00000509409 DCANP1Q8TF63 244 aa11.21□□□□□ -0.61
TPM3-219ENST00000509409 ACY3Q96HD9 319 aa11.21□□□□□ -0.61
TPM3-219ENST00000509409 RABL2AQ9UBK7 228 aaPredicted RBP11.21□□□□□ -0.61
TPM3-219ENST00000509409 SCP2D1Q9UJQ7 156 aa11.21□□□□□ -0.61
TPM3-219ENST00000509409 RABL2BQ9UNT1 228 aa11.21□□□□□ -0.61
TPM3-219ENST00000509409 TMEM56-RWDD3S4R434 201 aa11.21□□□□□ -0.61
TPM3-219ENST00000509409 IGLL5B9A064 214 aa11.2□□□□□ -0.62
TPM3-219ENST00000509409 IL4P05112 153 aa11.2□□□□□ -0.62
TPM3-219ENST00000509409 RD3LP0DJH9 198 aa11.2□□□□□ -0.62
TPM3-219ENST00000509409 PSMG4Q5JS54 123 aa11.2□□□□□ -0.62
TPM3-219ENST00000509409 RAB40CQ96S21 281 aa11.2□□□□□ -0.62
TPM3-219ENST00000509409 MCUBQ9NWR8 336 aa11.2□□□□□ -0.62
TPM3-219ENST00000509409 CLEC5AQ9NY25 188 aa11.2□□□□□ -0.62
TPM3-219ENST00000509409 PRR13Q9NZ81 148 aa11.2□□□□□ -0.62
TPM3-219ENST00000509409 U3KQE9 123 aa11.2□□□□□ -0.62
TPM3-219ENST00000509409 IGHV4-28A0A0C4DH34 117 aa11.19□□□□□ -0.62
TPM3-219ENST00000509409 GIG44P09565 113 aaPredicted RBP11.19□□□□□ -0.62
TPM3-219ENST00000509409 MIFP14174 115 aa11.19□□□□□ -0.62
TPM3-219ENST00000509409 AKR1C4P17516 323 aa11.19□□□□□ -0.62
TPM3-219ENST00000509409 Q8NAQ8 132 aa11.19□□□□□ -0.62
TPM3-219ENST00000509409 IL22RA2Q969J5 263 aa11.19□□□□□ -0.62
TPM3-219ENST00000509409 RSL24D1Q9UHA3 163 aaKnown RBP11.19□□□□□ -0.62
TPM3-219ENST00000509409 U3KQ87 197 aa11.19□□□□□ -0.62
TPM3-219ENST00000509409 ANKRD20A5PA0PJZ0 165 aa11.18□□□□□ -0.62
TPM3-219ENST00000509409 C11orf94C9JXX5 98 aa11.18□□□□□ -0.62
TPM3-219ENST00000509409 TOMM40O96008 361 aa11.18□□□□□ -0.62
TPM3-219ENST00000509409 RBMY1A1P0DJD3 496 aaKnown RBP11.18□□□□□ -0.62
TPM3-219ENST00000509409 RBMY1CP0DJD4 496 aa11.18□□□□□ -0.62
TPM3-219ENST00000509409 CCR6P51684 374 aa11.18□□□□□ -0.62
TPM3-219ENST00000509409 SNRPD3P62318 126 aaKnown RBP11.18□□□□□ -0.62
TPM3-219ENST00000509409 RBMY1FQ15415 496 aaKnown RBP11.18□□□□□ -0.62
TPM3-219ENST00000509409 RAB2BQ8WUD1 216 aa11.18□□□□□ -0.62
TPM3-219ENST00000509409 TMEM170AQ8WVE7 144 aa11.18□□□□□ -0.62
TPM3-219ENST00000509409 GLMPQ8WWB7 406 aa11.18□□□□□ -0.62
TPM3-219ENST00000509409 CCDC59Q9P031 241 aaKnown RBP11.18□□□□□ -0.62
TPM3-219ENST00000509409 TBC1D24Q9ULP9 559 aa11.18□□□□□ -0.62
TPM3-219ENST00000509409 GSTZ1O43708 216 aaPredicted RBP11.17□□□□□ -0.62
TPM3-219ENST00000509409 NOL3O60936 208 aaKnown RBP11.17□□□□□ -0.62
TPM3-219ENST00000509409 ANXA3P12429 323 aa11.17□□□□□ -0.62
TPM3-219ENST00000509409 C4BPBP20851 252 aa11.17□□□□□ -0.62
TPM3-219ENST00000509409 HLA-DMBP28068 263 aa11.17□□□□□ -0.62
TPM3-219ENST00000509409 TCTAP57738 103 aa11.17□□□□□ -0.62
TPM3-219ENST00000509409 NUTF2P61970 127 aaKnown RBP11.17□□□□□ -0.62
TPM3-219ENST00000509409 KLF9Q13886 244 aaPredicted RBP11.17□□□□□ -0.62
TPM3-219ENST00000509409 SMCO1Q147U7 214 aa11.17□□□□□ -0.62
TPM3-219ENST00000509409 USF2Q15853 346 aaPredicted RBP11.17□□□□□ -0.62
TPM3-219ENST00000509409 NMSQ5H8A3 153 aa11.17□□□□□ -0.62
TPM3-219ENST00000509409 SIGLEC15Q6ZMC9 328 aa11.17□□□□□ -0.62
TPM3-219ENST00000509409 LYZL2Q7Z4W2 148 aa11.17□□□□□ -0.62
TPM3-219ENST00000509409 LGI3Q8N145 548 aa11.17□□□□□ -0.62
TPM3-219ENST00000509409 OR51G1Q8NGK1 321 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms