RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 C1QL4Q86Z23 238 aa11.4□□□□□ -0.58
RNF4-213ENST00000509388 OR1S2Q8NGQ3 325 aa11.4□□□□□ -0.58
RNF4-213ENST00000509388 CHRDL1Q9BU40 450 aa11.4□□□□□ -0.58
RNF4-213ENST00000509388 MRPL36Q9P0J6 103 aaKnown RBP11.4□□□□□ -0.58
RNF4-213ENST00000509388 IGHV3-35A0A0C4DH35 117 aa11.39□□□□□ -0.59
RNF4-213ENST00000509388 PRSS46E5RG02 174 aa11.39□□□□□ -0.59
RNF4-213ENST00000509388 OVOL1O14753 267 aa11.39□□□□□ -0.59
RNF4-213ENST00000509388 FABP1P07148 127 aa11.39□□□□□ -0.59
RNF4-213ENST00000509388 LYL1P12980 280 aa11.39□□□□□ -0.59
RNF4-213ENST00000509388 RPL12P30050 165 aaKnown RBP11.39□□□□□ -0.59
RNF4-213ENST00000509388 ATP6V1FQ16864 119 aa11.39□□□□□ -0.59
RNF4-213ENST00000509388 TIGITQ495A1 244 aa11.39□□□□□ -0.59
RNF4-213ENST00000509388 LINC00482Q8N8I6 264 aa11.39□□□□□ -0.59
RNF4-213ENST00000509388 INO80EQ8NBZ0 244 aaPredicted RBP11.39□□□□□ -0.59
RNF4-213ENST00000509388 Q8WTZ3 238 aa11.39□□□□□ -0.59
RNF4-213ENST00000509388 DLX4Q92988 240 aaPredicted RBP11.39□□□□□ -0.59
RNF4-213ENST00000509388 NPVFQ9HCQ7 196 aa11.39□□□□□ -0.59
RNF4-213ENST00000509388 PEMTQ9UBM1 199 aa11.39□□□□□ -0.59
RNF4-213ENST00000509388 FXYD6-FXYD2A0A087WZ82 144 aa11.38□□□□□ -0.59
RNF4-213ENST00000509388 ADMP35318 185 aa11.38□□□□□ -0.59
RNF4-213ENST00000509388 NHLH2Q02577 135 aa11.38□□□□□ -0.59
RNF4-213ENST00000509388 ARL16Q0P5N6 197 aa11.38□□□□□ -0.59
RNF4-213ENST00000509388 KLF5Q13887 457 aaPredicted RBP11.38□□□□□ -0.59
RNF4-213ENST00000509388 Q5BKY6 102 aa11.38□□□□□ -0.59
RNF4-213ENST00000509388 PRR31Q5SQ13 230 aa11.38□□□□□ -0.59
RNF4-213ENST00000509388 ZNF600Q6ZNG1 722 aa11.38□□□□□ -0.59
RNF4-213ENST00000509388 C20orf24Q9BUV8 137 aa11.38□□□□□ -0.59
RNF4-213ENST00000509388 ELOVL1Q9BW60 279 aa11.38□□□□□ -0.59
RNF4-213ENST00000509388 UQCC1Q9NVA1 299 aa11.38□□□□□ -0.59
RNF4-213ENST00000509388 FNDC10F2Z333 226 aa11.37□□□□□ -0.59
RNF4-213ENST00000509388 NDUFA4O00483 81 aa11.37□□□□□ -0.59
RNF4-213ENST00000509388 IGLC1P0CG04 106 aa11.37□□□□□ -0.59
RNF4-213ENST00000509388 RAB31Q13636 194 aa11.37□□□□□ -0.59
RNF4-213ENST00000509388 TREML4Q6UXN2 200 aa11.37□□□□□ -0.59
RNF4-213ENST00000509388 TMEM144Q7Z5S9 345 aa11.37□□□□□ -0.59
RNF4-213ENST00000509388 ZNF546Q86UE3 836 aa11.37□□□□□ -0.59
RNF4-213ENST00000509388 AKAP14Q86UN6 197 aa11.37□□□□□ -0.59
RNF4-213ENST00000509388 HAPLN4Q86UW8 402 aa11.37□□□□□ -0.59
RNF4-213ENST00000509388 OR5C1Q8NGR4 320 aa11.37□□□□□ -0.59
RNF4-213ENST00000509388 MCRIP2Q9BUT9 160 aaKnown RBP11.37□□□□□ -0.59
RNF4-213ENST00000509388 TMEM147Q9BVK8 224 aa11.37□□□□□ -0.59
RNF4-213ENST00000509388 UFC1Q9Y3C8 167 aa11.37□□□□□ -0.59
RNF4-213ENST00000509388 A0A1B0GVG6 124 aa11.36□□□□□ -0.59
RNF4-213ENST00000509388 SMLR1H3BR10 107 aa11.36□□□□□ -0.59
RNF4-213ENST00000509388 RD3LP0DJH9 198 aa11.36□□□□□ -0.59
RNF4-213ENST00000509388 YPEL3P61236 119 aaPredicted RBP11.36□□□□□ -0.59
RNF4-213ENST00000509388 TEPPQ6URK8 271 aa11.36□□□□□ -0.59
RNF4-213ENST00000509388 WFDC9Q8NEX5 89 aa11.36□□□□□ -0.59
RNF4-213ENST00000509388 OR9G4Q8NGQ1 327 aa11.36□□□□□ -0.59
RNF4-213ENST00000509388 HSPB11Q9Y547 144 aa11.36□□□□□ -0.59
RNF4-213ENST00000509388 PUS1Q9Y606 427 aaKnown RBP eCLIP11.36□□□□□ -0.59
RNF4-213ENST00000509388 LGALS9O00182 355 aa11.35□□□□□ -0.59
RNF4-213ENST00000509388 DFFBO76075 338 aa11.35□□□□□ -0.59
RNF4-213ENST00000509388 IGKV1-17P01599 117 aa11.35□□□□□ -0.59
RNF4-213ENST00000509388 CLINT1Q14677 625 aa11.35□□□□□ -0.59
RNF4-213ENST00000509388 REC114Q7Z4M0 266 aa11.35□□□□□ -0.59
RNF4-213ENST00000509388 THAP8Q8NA92 274 aa11.35□□□□□ -0.59
RNF4-213ENST00000509388 TMEM190Q8WZ59 177 aa11.35□□□□□ -0.59
RNF4-213ENST00000509388 RCC1LQ96I51 464 aaKnown RBP11.35□□□□□ -0.59
RNF4-213ENST00000509388 TRGV9Q99603 122 aa11.35□□□□□ -0.59
RNF4-213ENST00000509388 GINS3Q9BRX5 216 aa11.35□□□□□ -0.59
RNF4-213ENST00000509388 SMIM3Q9BZL3 60 aa11.35□□□□□ -0.59
RNF4-213ENST00000509388 IGHV3OR16-8A0A075B7F1 116 aa11.34□□□□□ -0.59
RNF4-213ENST00000509388 UBE2L5PA0A1B0GUS4 154 aa11.34□□□□□ -0.59
RNF4-213ENST00000509388 SEC14L6B5MCN3 397 aa11.34□□□□□ -0.59
RNF4-213ENST00000509388 TOMM40O96008 361 aa11.34□□□□□ -0.59
RNF4-213ENST00000509388 AP2S1P53680 142 aaPredicted RBP11.34□□□□□ -0.59
RNF4-213ENST00000509388 OR2F1Q13607 317 aa11.34□□□□□ -0.59
RNF4-213ENST00000509388 TOMM20LQ6UXN7 152 aa11.34□□□□□ -0.59
RNF4-213ENST00000509388 UNQ9165/PRO28630Q6UXU0 137 aa11.34□□□□□ -0.59
RNF4-213ENST00000509388 AQP10Q96PS8 301 aa11.34□□□□□ -0.59
RNF4-213ENST00000509388 GPR61Q9BZJ8 451 aa11.34□□□□□ -0.59
RNF4-213ENST00000509388 IGKV1D-37A0A075B6S9 117 aa11.33□□□□□ -0.6
RNF4-213ENST00000509388 ARPC5O15511 151 aa11.33□□□□□ -0.6
RNF4-213ENST00000509388 SAP30O75446 220 aa11.33□□□□□ -0.6
RNF4-213ENST00000509388 CFDP00746 253 aaPredicted RBP11.33□□□□□ -0.6
RNF4-213ENST00000509388 IFNA5P01569 189 aa11.33□□□□□ -0.6
RNF4-213ENST00000509388 PSG1P11464 419 aa11.33□□□□□ -0.6
RNF4-213ENST00000509388 ELLP55199 621 aaPredicted RBP11.33□□□□□ -0.6
RNF4-213ENST00000509388 ZNF90Q03938 601 aa11.33□□□□□ -0.6
RNF4-213ENST00000509388 CYP2G1PQ6ZSU1 146 aa11.33□□□□□ -0.6
RNF4-213ENST00000509388 BPIFCQ8NFQ6 507 aa11.33□□□□□ -0.6
RNF4-213ENST00000509388 OR51G1Q8NGK1 321 aa11.33□□□□□ -0.6
RNF4-213ENST00000509388 ST6GAL2Q96JF0 529 aa11.33□□□□□ -0.6
RNF4-213ENST00000509388 ATP5SQ99766 215 aa11.33□□□□□ -0.6
RNF4-213ENST00000509388 DAZ1Q9NQZ3 744 aaKnown RBP11.33□□□□□ -0.6
RNF4-213ENST00000509388 TNFSF18Q9UNG2 199 aa11.33□□□□□ -0.6
RNF4-213ENST00000509388 IGKV1OR2-108A0A075B7D4 117 aa11.32□□□□□ -0.6
RNF4-213ENST00000509388 K7EMT4 169 aa11.32□□□□□ -0.6
RNF4-213ENST00000509388 ZNF207O43670 478 aaKnown RBP11.32□□□□□ -0.6
RNF4-213ENST00000509388 IL4P05112 153 aa11.32□□□□□ -0.6
RNF4-213ENST00000509388 IGLL1P15814 213 aa11.32□□□□□ -0.6
RNF4-213ENST00000509388 FGF7P21781 194 aa11.32□□□□□ -0.6
RNF4-213ENST00000509388 CAMLGP49069 296 aa11.32□□□□□ -0.6
RNF4-213ENST00000509388 SELENOTP62341 195 aa11.32□□□□□ -0.6
RNF4-213ENST00000509388 VWC2Q2TAL6 325 aa11.32□□□□□ -0.6
RNF4-213ENST00000509388 TM4SF20Q53R12 229 aa11.32□□□□□ -0.6
RNF4-213ENST00000509388 C9orf66Q5T8R8 295 aa11.32□□□□□ -0.6
RNF4-213ENST00000509388 BTNL8Q6UX41 500 aa11.32□□□□□ -0.6
RNF4-213ENST00000509388 TCTE3Q8IZS6 198 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 608.5 ms