RNA–Protein interactions for RNA: ENST00000507996.5

KDM3B-204, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 3,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-204ENST00000507996 A0A1W2PPV4 95 aa5.03□□□□□ -1.6
KDM3B-204ENST00000507996 RBMXL2O75526 392 aaKnown RBP5.03□□□□□ -1.6
KDM3B-204ENST00000507996 IGFBP2P18065 325 aa5.03□□□□□ -1.6
KDM3B-204ENST00000507996 GRNP28799 593 aaKnown RBP5.03□□□□□ -1.6
KDM3B-204ENST00000507996 CDAP32320 146 aa5.03□□□□□ -1.6
KDM3B-204ENST00000507996 GDF5OSQ5U4N7 250 aa5.03□□□□□ -1.6
KDM3B-204ENST00000507996 GJC3Q8NFK1 279 aa5.03□□□□□ -1.6
KDM3B-204ENST00000507996 TMEM54Q969K7 222 aa5.03□□□□□ -1.6
KDM3B-204ENST00000507996 MAP1LC3CQ9BXW4 147 aa5.03□□□□□ -1.6
KDM3B-204ENST00000507996 SLC25A10Q9UBX3 287 aaPredicted RBP5.03□□□□□ -1.6
KDM3B-204ENST00000507996 LINC00312Q9Y6C7 94 aa5.03□□□□□ -1.6
KDM3B-204ENST00000507996 ZZEF1O43149 2961 aa5.03□□□□□ -1.6
KDM3B-204ENST00000507996 LEPROTL1O95214 131 aa5.02□□□□□ -1.61
KDM3B-204ENST00000507996 CLDN1O95832 211 aa5.02□□□□□ -1.61
KDM3B-204ENST00000507996 RPL24P83731 157 aaKnown RBP5.02□□□□□ -1.61
KDM3B-204ENST00000507996 GAGE5Q13069 117 aa5.02□□□□□ -1.61
KDM3B-204ENST00000507996 GAGE6Q13070 117 aa5.02□□□□□ -1.61
KDM3B-204ENST00000507996 KLRD1Q13241 179 aa5.02□□□□□ -1.61
KDM3B-204ENST00000507996 SAMD5Q5TGI4 173 aa5.02□□□□□ -1.61
KDM3B-204ENST00000507996 LINC00596Q86U02 117 aa5.02□□□□□ -1.61
KDM3B-204ENST00000507996 TUSC5Q8IXB3 177 aa5.02□□□□□ -1.61
KDM3B-204ENST00000507996 C8orf46Q8TAG6 207 aa5.02□□□□□ -1.61
KDM3B-204ENST00000507996 BORCS8Q96FH0 119 aa5.02□□□□□ -1.61
KDM3B-204ENST00000507996 GPHA2Q96T91 129 aa5.02□□□□□ -1.61
KDM3B-204ENST00000507996 SPAG8Q99932 426 aaPredicted RBP5.02□□□□□ -1.61
KDM3B-204ENST00000507996 HSPB8Q9UJY1 196 aa5.02□□□□□ -1.61
KDM3B-204ENST00000507996 AKAP6Q13023 2319 aa5.02□□□□□ -1.61
KDM3B-204ENST00000507996 SPTBN1Q01082 2364 aaKnown RBP5.02□□□□□ -1.61
KDM3B-204ENST00000507996 ZNF716A6NP11 495 aa5.02□□□□□ -1.61
KDM3B-204ENST00000507996 BRI3O95415 125 aa5.02□□□□□ -1.61
KDM3B-204ENST00000507996 CRYGSP22914 178 aa5.02□□□□□ -1.61
KDM3B-204ENST00000507996 FOXE3Q13461 319 aa5.02□□□□□ -1.61
KDM3B-204ENST00000507996 PDCD1Q15116 288 aa5.02□□□□□ -1.61
KDM3B-204ENST00000507996 IZUMO4Q1ZYL8 232 aa5.02□□□□□ -1.61
KDM3B-204ENST00000507996 CEACAM21Q3KPI0 293 aa5.02□□□□□ -1.61
KDM3B-204ENST00000507996 C8orf86Q6ZUL3 223 aa5.02□□□□□ -1.61
KDM3B-204ENST00000507996 AAED1Q7RTV5 226 aa5.02□□□□□ -1.61
KDM3B-204ENST00000507996 DOLPP1Q86YN1 238 aa5.02□□□□□ -1.61
KDM3B-204ENST00000507996 PIFOQ8TCI5 191 aa5.02□□□□□ -1.61
KDM3B-204ENST00000507996 GTSF1Q8WW33 167 aa5.02□□□□□ -1.61
KDM3B-204ENST00000507996 NEU4Q8WWR8 484 aaPredicted RBP5.02□□□□□ -1.61
KDM3B-204ENST00000507996 TRIB1Q96RU8 372 aa5.02□□□□□ -1.61
KDM3B-204ENST00000507996 TMEM133Q9H2Q1 129 aa5.02□□□□□ -1.61
KDM3B-204ENST00000507996 CLCF1Q9UBD9 225 aa5.02□□□□□ -1.61
KDM3B-204ENST00000507996 RABAC1Q9UI14 185 aa5.02□□□□□ -1.61
KDM3B-204ENST00000507996 CYSLTR1Q9Y271 337 aa5.02□□□□□ -1.61
KDM3B-204ENST00000507996 SOX21Q9Y651 276 aaPredicted RBP5.02□□□□□ -1.61
KDM3B-204ENST00000507996 PTPRQQ9UMZ3 2332 aa5.02□□□□□ -1.61
KDM3B-204ENST00000507996 BSNQ9UPA5 3926 aa5.02□□□□□ -1.61
KDM3B-204ENST00000507996 HELTA6NFD8 242 aa5.02□□□□□ -1.61
KDM3B-204ENST00000507996 IGHV3-7P01780 117 aa5.02□□□□□ -1.61
KDM3B-204ENST00000507996 ROS1P08922 2347 aa5.02□□□□□ -1.61
KDM3B-204ENST00000507996 SPATA46Q5T0L3 261 aa5.02□□□□□ -1.61
KDM3B-204ENST00000507996 IBA57Q5T440 356 aaKnown RBP5.02□□□□□ -1.61
KDM3B-204ENST00000507996 OR51H1Q8NH63 302 aa5.02□□□□□ -1.61
KDM3B-204ENST00000507996 PHLDA1Q8WV24 401 aaPredicted RBP5.02□□□□□ -1.61
KDM3B-204ENST00000507996 NABP1Q96AH0 204 aa5.02□□□□□ -1.61
KDM3B-204ENST00000507996 SPANXA1Q9NS26 97 aa5.02□□□□□ -1.61
KDM3B-204ENST00000507996 M0R135 149 aa5.01□□□□□ -1.61
KDM3B-204ENST00000507996 DHHO43323 396 aa5.01□□□□□ -1.61
KDM3B-204ENST00000507996 MRPL33O75394 65 aaKnown RBP5.01□□□□□ -1.61
KDM3B-204ENST00000507996 NTF4P34130 210 aa5.01□□□□□ -1.61
KDM3B-204ENST00000507996 UCNP55089 124 aa5.01□□□□□ -1.61
KDM3B-204ENST00000507996 TIGITQ495A1 244 aa5.01□□□□□ -1.61
KDM3B-204ENST00000507996 IGFL3Q6UXB1 125 aa5.01□□□□□ -1.61
KDM3B-204ENST00000507996 SPTSSAQ969W0 71 aa5.01□□□□□ -1.61
KDM3B-204ENST00000507996 ZNF837Q96EG3 531 aaPredicted RBP5.01□□□□□ -1.61
KDM3B-204ENST00000507996 ZNF799Q96GE5 643 aa5.01□□□□□ -1.61
KDM3B-204ENST00000507996 RNASE7Q9H1E1 156 aaKnown RBP5.01□□□□□ -1.61
KDM3B-204ENST00000507996 HIGD1BQ9P298 99 aa5.01□□□□□ -1.61
KDM3B-204ENST00000507996 ERRFI1Q9UJM3 462 aaPredicted RBP5.01□□□□□ -1.61
KDM3B-204ENST00000507996 A0A1W2PRD5 423 aa5.01□□□□□ -1.61
KDM3B-204ENST00000507996 A0A1W2PRF3 423 aa5.01□□□□□ -1.61
KDM3B-204ENST00000507996 A0A1W2PRM7 423 aa5.01□□□□□ -1.61
KDM3B-204ENST00000507996 PRSS46E5RG02 174 aa5.01□□□□□ -1.61
KDM3B-204ENST00000507996 CLDN14O95500 239 aa5.01□□□□□ -1.61
KDM3B-204ENST00000507996 FGF12P61328 243 aa5.01□□□□□ -1.61
KDM3B-204ENST00000507996 RPL8P62917 257 aaKnown RBP5.01□□□□□ -1.61
KDM3B-204ENST00000507996 EIF4EBP1Q13541 118 aaPredicted RBP5.01□□□□□ -1.61
KDM3B-204ENST00000507996 CR1LQ2VPA4 569 aa5.01□□□□□ -1.61
KDM3B-204ENST00000507996 PDLIM3Q53GG5 364 aaPredicted RBP5.01□□□□□ -1.61
KDM3B-204ENST00000507996 TMEM177Q53S58 311 aa5.01□□□□□ -1.61
KDM3B-204ENST00000507996 PSMG4Q5JS54 123 aa5.01□□□□□ -1.61
KDM3B-204ENST00000507996 LINC00173Q6ZV60 143 aa5.01□□□□□ -1.61
KDM3B-204ENST00000507996 CNEP1R1Q8N9A8 125 aa5.01□□□□□ -1.61
KDM3B-204ENST00000507996 WDR31Q8NA23 367 aa5.01□□□□□ -1.61
KDM3B-204ENST00000507996 CACNG8Q8WXS5 425 aa5.01□□□□□ -1.61
KDM3B-204ENST00000507996 CDIP1Q9H305 208 aa5.01□□□□□ -1.61
KDM3B-204ENST00000507996 HEYLQ9NQ87 328 aaPredicted RBP5.01□□□□□ -1.61
KDM3B-204ENST00000507996 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.01□□□□□ -1.61
KDM3B-204ENST00000507996 PRO0461Q9UI25 63 aa5.01□□□□□ -1.61
KDM3B-204ENST00000507996 ARHGAP21Q5T5U3 1957 aa5□□□□□ -1.61
KDM3B-204ENST00000507996 DOCK11Q5JSL3 2073 aa5□□□□□ -1.61
KDM3B-204ENST00000507996 A0A1W2PRE2 83 aa5□□□□□ -1.61
KDM3B-204ENST00000507996 C15orf62A8K5M9 175 aa5□□□□□ -1.61
KDM3B-204ENST00000507996 E9PLD3 99 aa5□□□□□ -1.61
KDM3B-204ENST00000507996 F5H5K5 113 aa5□□□□□ -1.61
KDM3B-204ENST00000507996 SMIM13P0DJ93 91 aa5□□□□□ -1.61
KDM3B-204ENST00000507996 DEFA4P12838 97 aa5□□□□□ -1.61
KDM3B-204ENST00000507996 HERV-K104P63124 156 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms