RNA–Protein interactions for RNA: ENST00000507944.5

CLDND1-216, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-216ENST00000507944 TMBIM6P55061 237 aa15.24■□□□□ 0.03
CLDND1-216ENST00000507944 PRSS54Q6PEW0 395 aa15.24■□□□□ 0.03
CLDND1-216ENST00000507944 SLC24A4Q8NFF2 622 aa15.24■□□□□ 0.03
CLDND1-216ENST00000507944 OR1S2Q8NGQ3 325 aa15.24■□□□□ 0.03
CLDND1-216ENST00000507944 RNASEH2CQ8TDP1 164 aaKnown RBP15.24■□□□□ 0.03
CLDND1-216ENST00000507944 BCL7BQ9BQE9 202 aa15.24■□□□□ 0.03
CLDND1-216ENST00000507944 KCNIP3Q9Y2W7 256 aa15.24■□□□□ 0.03
CLDND1-216ENST00000507944 K7EQG2 157 aa15.23■□□□□ 0.03
CLDND1-216ENST00000507944 GSTZ1O43708 216 aaPredicted RBP15.23■□□□□ 0.03
CLDND1-216ENST00000507944 IGLC1P0CG04 106 aa15.23■□□□□ 0.03
CLDND1-216ENST00000507944 RND2P52198 227 aa15.23■□□□□ 0.03
CLDND1-216ENST00000507944 TMEM187Q14656 261 aa15.23■□□□□ 0.03
CLDND1-216ENST00000507944 RBMS2Q15434 407 aaKnown RBP15.23■□□□□ 0.03
CLDND1-216ENST00000507944 STHQ8IWL8 128 aa15.23■□□□□ 0.03
CLDND1-216ENST00000507944 Q8WTZ3 238 aa15.23■□□□□ 0.03
CLDND1-216ENST00000507944 GRAMD2BQ96HH9 432 aa15.23■□□□□ 0.03
CLDND1-216ENST00000507944 CACFD1Q9UGQ2 172 aa15.23■□□□□ 0.03
CLDND1-216ENST00000507944 RSL24D1Q9UHA3 163 aaKnown RBP15.23■□□□□ 0.03
CLDND1-216ENST00000507944 SCP2D1Q9UJQ7 156 aa15.23■□□□□ 0.03
CLDND1-216ENST00000507944 OR10J1P30954 320 aa15.22■□□□□ 0.03
CLDND1-216ENST00000507944 YPEL3P61236 119 aaPredicted RBP15.22■□□□□ 0.03
CLDND1-216ENST00000507944 C11orf45Q8TAV5 145 aa15.22■□□□□ 0.03
CLDND1-216ENST00000507944 TMEM170AQ8WVE7 144 aa15.22■□□□□ 0.03
CLDND1-216ENST00000507944 IL22RA2Q969J5 263 aa15.22■□□□□ 0.03
CLDND1-216ENST00000507944 SCGB3A2Q96PL1 93 aa15.22■□□□□ 0.03
CLDND1-216ENST00000507944 C11orf68Q9H3H3 251 aaKnown RBP15.22■□□□□ 0.03
CLDND1-216ENST00000507944 PRR13Q9NZ81 148 aa15.22■□□□□ 0.03
CLDND1-216ENST00000507944 U3KQE9 123 aa15.22■□□□□ 0.03
CLDND1-216ENST00000507944 NXPH3O95157 252 aa15.21■□□□□ 0.03
CLDND1-216ENST00000507944 SULT1A3P0DMM9 295 aa15.21■□□□□ 0.03
CLDND1-216ENST00000507944 SULT1A4P0DMN0 295 aa15.21■□□□□ 0.03
CLDND1-216ENST00000507944 NANOS2P60321 138 aaKnown RBP15.21■□□□□ 0.03
CLDND1-216ENST00000507944 ETFRF1Q6IPR1 90 aa15.21■□□□□ 0.03
CLDND1-216ENST00000507944 NOXA1Q86UR1 476 aa15.21■□□□□ 0.03
CLDND1-216ENST00000507944 HNRNPCP07910 306 aaKnown RBP eCLIP15.2■□□□□ 0.02
CLDND1-216ENST00000507944 ZNF688P0C7X2 276 aa15.2■□□□□ 0.02
CLDND1-216ENST00000507944 NPY1RP25929 384 aa15.2■□□□□ 0.02
CLDND1-216ENST00000507944 EIF2B2P49770 351 aaKnown RBP15.2■□□□□ 0.02
CLDND1-216ENST00000507944 NMSQ5H8A3 153 aa15.2■□□□□ 0.02
CLDND1-216ENST00000507944 DCANP1Q8TF63 244 aa15.2■□□□□ 0.02
CLDND1-216ENST00000507944 NPIPB3Q92617 1050 aa15.2■□□□□ 0.02
CLDND1-216ENST00000507944 MFFQ9GZY8 342 aa15.2■□□□□ 0.02
CLDND1-216ENST00000507944 MCUBQ9NWR8 336 aa15.2■□□□□ 0.02
CLDND1-216ENST00000507944 HELTA6NFD8 242 aa15.19■□□□□ 0.02
CLDND1-216ENST00000507944 DEFB4AO15263 64 aa15.19■□□□□ 0.02
CLDND1-216ENST00000507944 AKR1C4P17516 323 aa15.19■□□□□ 0.02
CLDND1-216ENST00000507944 TNFSF8P32971 234 aa15.19■□□□□ 0.02
CLDND1-216ENST00000507944 DHRS2Q13268 280 aa15.19■□□□□ 0.02
CLDND1-216ENST00000507944 C16orf54Q6UWD8 224 aa15.19■□□□□ 0.02
CLDND1-216ENST00000507944 TRPT1Q86TN4 253 aaKnown RBP15.19■□□□□ 0.02
CLDND1-216ENST00000507944 SOSTQ9BQB4 213 aa15.19■□□□□ 0.02
CLDND1-216ENST00000507944 SLIRPQ9GZT3 109 aaKnown RBP15.19■□□□□ 0.02
CLDND1-216ENST00000507944 FBXL17Q9UF56 701 aa15.19■□□□□ 0.02
CLDND1-216ENST00000507944 KMT2AQ03164 3969 aa15.18■□□□□ 0.02
CLDND1-216ENST00000507944 A0A0B4J2A0 478 aa15.18■□□□□ 0.02
CLDND1-216ENST00000507944 FABP12A6NFH5 140 aa15.18■□□□□ 0.02
CLDND1-216ENST00000507944 KNCNA6PVL3 124 aa15.18■□□□□ 0.02
CLDND1-216ENST00000507944 IFNA10P01566 189 aa15.18■□□□□ 0.02
CLDND1-216ENST00000507944 IFNA4P05014 189 aa15.18■□□□□ 0.02
CLDND1-216ENST00000507944 GIG44P09565 113 aaPredicted RBP15.18■□□□□ 0.02
CLDND1-216ENST00000507944 CCR6P51684 374 aa15.18■□□□□ 0.02
CLDND1-216ENST00000507944 AP2S1P53680 142 aaPredicted RBP15.18■□□□□ 0.02
CLDND1-216ENST00000507944 GLMPQ8WWB7 406 aa15.18■□□□□ 0.02
CLDND1-216ENST00000507944 ACY3Q96HD9 319 aa15.18■□□□□ 0.02
CLDND1-216ENST00000507944 SHPKQ9UHJ6 478 aa15.18■□□□□ 0.02
CLDND1-216ENST00000507944 U3KQ87 197 aa15.18■□□□□ 0.02
CLDND1-216ENST00000507944 NOL3O60936 208 aaKnown RBP15.17■□□□□ 0.02
CLDND1-216ENST00000507944 IL4P05112 153 aa15.17■□□□□ 0.02
CLDND1-216ENST00000507944 RD3LP0DJH9 198 aa15.17■□□□□ 0.02
CLDND1-216ENST00000507944 SUPT4H1P63272 117 aaKnown RBP15.17■□□□□ 0.02
CLDND1-216ENST00000507944 SMCO1Q147U7 214 aa15.17■□□□□ 0.02
CLDND1-216ENST00000507944 USF2Q15853 346 aaPredicted RBP15.17■□□□□ 0.02
CLDND1-216ENST00000507944 TMEM41BQ5BJD5 291 aa15.17■□□□□ 0.02
CLDND1-216ENST00000507944 MORN3Q6PF18 240 aaPredicted RBP15.17■□□□□ 0.02
CLDND1-216ENST00000507944 LYZL2Q7Z4W2 148 aa15.17■□□□□ 0.02
CLDND1-216ENST00000507944 HSPB7Q9UBY9 170 aa15.17■□□□□ 0.02
CLDND1-216ENST00000507944 H3BMQ9 156 aa15.16■□□□□ 0.02
CLDND1-216ENST00000507944 TOMM40O96008 361 aa15.16■□□□□ 0.02
CLDND1-216ENST00000507944 SPP1P10451 314 aa15.16■□□□□ 0.02
CLDND1-216ENST00000507944 ACTL10Q5JWF8 245 aa15.16■□□□□ 0.02
CLDND1-216ENST00000507944 LGI3Q8N145 548 aa15.16■□□□□ 0.02
CLDND1-216ENST00000507944 MCFD2Q8NI22 146 aa15.16■□□□□ 0.02
CLDND1-216ENST00000507944 DTD1Q8TEA8 209 aa15.16■□□□□ 0.02
CLDND1-216ENST00000507944 ANXA3P12429 323 aa15.15■□□□□ 0.02
CLDND1-216ENST00000507944 RBKSQ9H477 322 aa15.15■□□□□ 0.02
CLDND1-216ENST00000507944 SRPXP78539 464 aa15.14■□□□□ 0.01
CLDND1-216ENST00000507944 PSMG4Q5JS54 123 aa15.14■□□□□ 0.01
CLDND1-216ENST00000507944 LGALS9CQ6DKI2 356 aa15.14■□□□□ 0.01
CLDND1-216ENST00000507944 Q8NAQ8 132 aa15.14■□□□□ 0.01
CLDND1-216ENST00000507944 RAB40CQ96S21 281 aa15.14■□□□□ 0.01
CLDND1-216ENST00000507944 BUB3O43684 328 aa15.13■□□□□ 0.01
CLDND1-216ENST00000507944 PSG1P11464 419 aa15.13■□□□□ 0.01
CLDND1-216ENST00000507944 C4BPBP20851 252 aa15.13■□□□□ 0.01
CLDND1-216ENST00000507944 FAUP35544 74 aaKnown RBP15.13■□□□□ 0.01
CLDND1-216ENST00000507944 KLF9Q13886 244 aaPredicted RBP15.13■□□□□ 0.01
CLDND1-216ENST00000507944 RPP25LQ8N5L8 163 aaKnown RBP15.13■□□□□ 0.01
CLDND1-216ENST00000507944 OR1S1Q8NH92 325 aa15.13■□□□□ 0.01
CLDND1-216ENST00000507944 IGHV4-28A0A0C4DH34 117 aa15.12■□□□□ 0.01
CLDND1-216ENST00000507944 RBMY1A1P0DJD3 496 aaKnown RBP15.12■□□□□ 0.01
CLDND1-216ENST00000507944 RBMY1CP0DJD4 496 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms