RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 FNDC4Q9H6D8 234 aaPredicted RBP10.62□□□□□ -0.71
HMGCS1-203ENST00000507004 PFDN2Q9UHV9 154 aa10.62□□□□□ -0.71
HMGCS1-203ENST00000507004 ANKRD20A5PA0PJZ0 165 aa10.61□□□□□ -0.71
HMGCS1-203ENST00000507004 NUP62P37198 522 aaPredicted RBP10.61□□□□□ -0.71
HMGCS1-203ENST00000507004 P2RY1P47900 373 aa10.61□□□□□ -0.71
HMGCS1-203ENST00000507004 DEFB131AP59861 70 aa10.61□□□□□ -0.71
HMGCS1-203ENST00000507004 TMEM187Q14656 261 aa10.61□□□□□ -0.71
HMGCS1-203ENST00000507004 Q6ZRM9 215 aa10.61□□□□□ -0.71
HMGCS1-203ENST00000507004 OR51S1Q8NGJ8 323 aa10.61□□□□□ -0.71
HMGCS1-203ENST00000507004 DEDD2Q8WXF8 326 aa10.61□□□□□ -0.71
HMGCS1-203ENST00000507004 GPR146Q96CH1 333 aa10.61□□□□□ -0.71
HMGCS1-203ENST00000507004 SEPSECSQ9HD40 501 aaKnown RBP10.61□□□□□ -0.71
HMGCS1-203ENST00000507004 RABAC1Q9UI14 185 aa10.61□□□□□ -0.71
HMGCS1-203ENST00000507004 U3KQ87 197 aa10.61□□□□□ -0.71
HMGCS1-203ENST00000507004 A0A0B4J2A0 478 aa10.6□□□□□ -0.71
HMGCS1-203ENST00000507004 CA1P00915 261 aaPredicted RBP10.6□□□□□ -0.71
HMGCS1-203ENST00000507004 IGKV1-17P01599 117 aa10.6□□□□□ -0.71
HMGCS1-203ENST00000507004 IGLC1P0CG04 106 aa10.6□□□□□ -0.71
HMGCS1-203ENST00000507004 SPP1P10451 314 aa10.6□□□□□ -0.71
HMGCS1-203ENST00000507004 NPY1RP25929 384 aa10.6□□□□□ -0.71
HMGCS1-203ENST00000507004 CCR6P51684 374 aa10.6□□□□□ -0.71
HMGCS1-203ENST00000507004 TCTAP57738 103 aa10.6□□□□□ -0.71
HMGCS1-203ENST00000507004 AP3S2P59780 193 aa10.6□□□□□ -0.71
HMGCS1-203ENST00000507004 FAAP20Q6NZ36 180 aa10.6□□□□□ -0.71
HMGCS1-203ENST00000507004 OR11H2Q8NH07 326 aa10.6□□□□□ -0.71
HMGCS1-203ENST00000507004 LHFPL5Q8TAF8 219 aa10.6□□□□□ -0.71
HMGCS1-203ENST00000507004 SHPKQ9UHJ6 478 aa10.6□□□□□ -0.71
HMGCS1-203ENST00000507004 DUXBA0A1W2PPF3 345 aa10.59□□□□□ -0.71
HMGCS1-203ENST00000507004 FABP12A6NFH5 140 aa10.59□□□□□ -0.71
HMGCS1-203ENST00000507004 K7EQG2 157 aa10.59□□□□□ -0.71
HMGCS1-203ENST00000507004 APOHP02749 345 aaPredicted RBP10.59□□□□□ -0.71
HMGCS1-203ENST00000507004 IFNA4P05014 189 aa10.59□□□□□ -0.71
HMGCS1-203ENST00000507004 HNRNPCP07910 306 aaKnown RBP eCLIP10.59□□□□□ -0.71
HMGCS1-203ENST00000507004 OR10J1P30954 320 aa10.59□□□□□ -0.71
HMGCS1-203ENST00000507004 RND2P52198 227 aa10.59□□□□□ -0.71
HMGCS1-203ENST00000507004 NMSQ5H8A3 153 aa10.59□□□□□ -0.71
HMGCS1-203ENST00000507004 PRSS54Q6PEW0 395 aa10.59□□□□□ -0.71
HMGCS1-203ENST00000507004 LGI3Q8N145 548 aa10.59□□□□□ -0.71
HMGCS1-203ENST00000507004 STXBP6Q8NFX7 210 aa10.59□□□□□ -0.71
HMGCS1-203ENST00000507004 LYSTQ99698 3801 aa10.59□□□□□ -0.71
HMGCS1-203ENST00000507004 U3KQE9 123 aa10.59□□□□□ -0.71
HMGCS1-203ENST00000507004 IGHV3-66A0A0C4DH42 116 aa10.58□□□□□ -0.72
HMGCS1-203ENST00000507004 LY6G6CO95867 125 aa10.58□□□□□ -0.72
HMGCS1-203ENST00000507004 FABP1P07148 127 aa10.58□□□□□ -0.72
HMGCS1-203ENST00000507004 SMCO1Q147U7 214 aa10.58□□□□□ -0.72
HMGCS1-203ENST00000507004 TIGITQ495A1 244 aa10.58□□□□□ -0.72
HMGCS1-203ENST00000507004 LILRB2Q8N423 598 aa10.58□□□□□ -0.72
HMGCS1-203ENST00000507004 C11orf45Q8TAV5 145 aa10.58□□□□□ -0.72
HMGCS1-203ENST00000507004 PHLDA1Q8WV24 401 aaPredicted RBP10.58□□□□□ -0.72
HMGCS1-203ENST00000507004 MCUBQ9NWR8 336 aa10.58□□□□□ -0.72
HMGCS1-203ENST00000507004 MRPL36Q9P0J6 103 aaKnown RBP10.58□□□□□ -0.72
HMGCS1-203ENST00000507004 TOMM40O96008 361 aa10.57□□□□□ -0.72
HMGCS1-203ENST00000507004 IFNA10P01566 189 aa10.57□□□□□ -0.72
HMGCS1-203ENST00000507004 SNRPD3P62318 126 aaKnown RBP10.57□□□□□ -0.72
HMGCS1-203ENST00000507004 RBMS2Q15434 407 aaKnown RBP10.57□□□□□ -0.72
HMGCS1-203ENST00000507004 ZNF124Q15973 351 aa10.57□□□□□ -0.72
HMGCS1-203ENST00000507004 MLANAQ16655 118 aa10.57□□□□□ -0.72
HMGCS1-203ENST00000507004 LEMD1Q68G75 181 aa10.57□□□□□ -0.72
HMGCS1-203ENST00000507004 CENPSQ8N2Z9 138 aa10.57□□□□□ -0.72
HMGCS1-203ENST00000507004 MCFD2Q8NI22 146 aa10.57□□□□□ -0.72
HMGCS1-203ENST00000507004 SLIRPQ9GZT3 109 aaKnown RBP10.57□□□□□ -0.72
HMGCS1-203ENST00000507004 HSPB7Q9UBY9 170 aa10.57□□□□□ -0.72
HMGCS1-203ENST00000507004 C11orf94C9JXX5 98 aa10.56□□□□□ -0.72
HMGCS1-203ENST00000507004 RD3LP0DJH9 198 aa10.56□□□□□ -0.72
HMGCS1-203ENST00000507004 MIFP14174 115 aa10.56□□□□□ -0.72
HMGCS1-203ENST00000507004 AKR1C4P17516 323 aa10.56□□□□□ -0.72
HMGCS1-203ENST00000507004 TNFSF8P32971 234 aa10.56□□□□□ -0.72
HMGCS1-203ENST00000507004 GPX4P36969 197 aaPredicted RBP10.56□□□□□ -0.72
HMGCS1-203ENST00000507004 NUTF2P61970 127 aaKnown RBP10.56□□□□□ -0.72
HMGCS1-203ENST00000507004 EWSR1Q01844 656 aaKnown RBP eCLIP10.56□□□□□ -0.72
HMGCS1-203ENST00000507004 C16orf54Q6UWD8 224 aa10.56□□□□□ -0.72
HMGCS1-203ENST00000507004 TRPT1Q86TN4 253 aaKnown RBP10.56□□□□□ -0.72
HMGCS1-203ENST00000507004 DTD1Q8TEA8 209 aa10.56□□□□□ -0.72
HMGCS1-203ENST00000507004 DCANP1Q8TF63 244 aa10.56□□□□□ -0.72
HMGCS1-203ENST00000507004 SOSTQ9BQB4 213 aa10.56□□□□□ -0.72
HMGCS1-203ENST00000507004 C1QTNF4Q9BXJ3 329 aa10.56□□□□□ -0.72
HMGCS1-203ENST00000507004 HRH4Q9H3N8 390 aa10.56□□□□□ -0.72
HMGCS1-203ENST00000507004 IL4P05112 153 aa10.55□□□□□ -0.72
HMGCS1-203ENST00000507004 DHRS2Q13268 280 aa10.55□□□□□ -0.72
HMGCS1-203ENST00000507004 KLF9Q13886 244 aaPredicted RBP10.55□□□□□ -0.72
HMGCS1-203ENST00000507004 TMEM128Q5BJH2 165 aa10.55□□□□□ -0.72
HMGCS1-203ENST00000507004 LGALS9CQ6DKI2 356 aa10.55□□□□□ -0.72
HMGCS1-203ENST00000507004 OR8G2PQ6IF36 304 aa10.55□□□□□ -0.72
HMGCS1-203ENST00000507004 OR51G1Q8NGK1 321 aa10.55□□□□□ -0.72
HMGCS1-203ENST00000507004 GLMPQ8WWB7 406 aa10.55□□□□□ -0.72
HMGCS1-203ENST00000507004 NPIPB3Q92617 1050 aa10.55□□□□□ -0.72
HMGCS1-203ENST00000507004 SLC25A21Q9BQT8 299 aaPredicted RBP10.55□□□□□ -0.72
HMGCS1-203ENST00000507004 PLECQ15149 4684 aaKnown RBP10.55□□□□□ -0.72
HMGCS1-203ENST00000507004 FAM90A26D6RGX4 464 aa10.54□□□□□ -0.72
HMGCS1-203ENST00000507004 H3BMQ9 156 aa10.54□□□□□ -0.72
HMGCS1-203ENST00000507004 MED6O75586 246 aa10.54□□□□□ -0.72
HMGCS1-203ENST00000507004 ZNF688P0C7X2 276 aa10.54□□□□□ -0.72
HMGCS1-203ENST00000507004 SLC25A6P12236 298 aa10.54□□□□□ -0.72
HMGCS1-203ENST00000507004 S100A7P31151 101 aa10.54□□□□□ -0.72
HMGCS1-203ENST00000507004 S100A5P33763 92 aa10.54□□□□□ -0.72
HMGCS1-203ENST00000507004 RAB11AP62491 216 aa10.54□□□□□ -0.72
HMGCS1-203ENST00000507004 RPP30P78346 268 aaKnown RBP10.54□□□□□ -0.72
HMGCS1-203ENST00000507004 SAMD13Q5VXD3 122 aa10.54□□□□□ -0.72
HMGCS1-203ENST00000507004 TOMM5Q8N4H5 51 aa10.54□□□□□ -0.72
HMGCS1-203ENST00000507004 OR1S1Q8NH92 325 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms