RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 CMTM3Q96MX0 182 aa3.6□□□□□ -1.83
CDH9-203ENST00000505045 SRSF8Q9BRL6 282 aaKnown RBP3.6□□□□□ -1.83
CDH9-203ENST00000505045 SRRQ9GZT4 340 aa3.6□□□□□ -1.83
CDH9-203ENST00000505045 SLC2A8Q9NY64 477 aa3.6□□□□□ -1.83
CDH9-203ENST00000505045 C21orf62Q9NYP8 219 aa3.6□□□□□ -1.83
CDH9-203ENST00000505045 TECRQ9NZ01 308 aaKnown RBP3.6□□□□□ -1.83
CDH9-203ENST00000505045 MTFP1Q9UDX5 166 aa3.6□□□□□ -1.83
CDH9-203ENST00000505045 A0A0B4J293 547 aa3.59□□□□□ -1.83
CDH9-203ENST00000505045 LCE6AA0A183 80 aa3.59□□□□□ -1.83
CDH9-203ENST00000505045 CD74P04233 296 aa3.59□□□□□ -1.83
CDH9-203ENST00000505045 CTSGP08311 255 aa3.59□□□□□ -1.83
CDH9-203ENST00000505045 PGAM2P15259 253 aa3.59□□□□□ -1.83
CDH9-203ENST00000505045 UCP3P55916 312 aa3.59□□□□□ -1.83
CDH9-203ENST00000505045 BAK1Q16611 211 aa3.59□□□□□ -1.83
CDH9-203ENST00000505045 FAM106AQ4KMX7 169 aa3.59□□□□□ -1.83
CDH9-203ENST00000505045 RNASE10Q5GAN6 216 aaKnown RBP3.59□□□□□ -1.83
CDH9-203ENST00000505045 ZNF114Q8NC26 417 aa3.59□□□□□ -1.83
CDH9-203ENST00000505045 OR52B4Q8NGK2 314 aa3.59□□□□□ -1.83
CDH9-203ENST00000505045 OR1P1Q8NH06 330 aa3.59□□□□□ -1.83
CDH9-203ENST00000505045 MARCH1Q8TCQ1 289 aa3.59□□□□□ -1.83
CDH9-203ENST00000505045 VN1R17PQ8TDU5 208 aa3.59□□□□□ -1.83
CDH9-203ENST00000505045 PINX1Q96BK5 328 aaKnown RBP3.59□□□□□ -1.83
CDH9-203ENST00000505045 BSCL2Q96G97 398 aaPredicted RBP3.59□□□□□ -1.83
CDH9-203ENST00000505045 RNF2Q99496 336 aa3.59□□□□□ -1.83
CDH9-203ENST00000505045 C20orf24Q9BUV8 137 aa3.59□□□□□ -1.83
CDH9-203ENST00000505045 DAZ1Q9NQZ3 744 aaKnown RBP3.59□□□□□ -1.83
CDH9-203ENST00000505045 PRNDQ9UKY0 176 aa3.59□□□□□ -1.83
CDH9-203ENST00000505045 V9GYH0 126 aa3.59□□□□□ -1.83
CDH9-203ENST00000505045 IGKV3-7A0A075B6H7 116 aa3.58□□□□□ -1.84
CDH9-203ENST00000505045 NDUFA4O00483 81 aa3.58□□□□□ -1.84
CDH9-203ENST00000505045 ST8SIA3O43173 380 aa3.58□□□□□ -1.84
CDH9-203ENST00000505045 SNAPC5O75971 98 aa3.58□□□□□ -1.84
CDH9-203ENST00000505045 NXPH3O95157 252 aa3.58□□□□□ -1.84
CDH9-203ENST00000505045 MT-CO2P00403 227 aa3.58□□□□□ -1.84
CDH9-203ENST00000505045 APOHP02749 345 aaPredicted RBP3.58□□□□□ -1.84
CDH9-203ENST00000505045 MALP21145 153 aa3.58□□□□□ -1.84
CDH9-203ENST00000505045 AKR1C2P52895 323 aa3.58□□□□□ -1.84
CDH9-203ENST00000505045 RND3P61587 244 aa3.58□□□□□ -1.84
CDH9-203ENST00000505045 ODF1Q14990 250 aa3.58□□□□□ -1.84
CDH9-203ENST00000505045 DEFB135Q30KP9 77 aa3.58□□□□□ -1.84
CDH9-203ENST00000505045 SCGB2B2Q4G0G5 96 aa3.58□□□□□ -1.84
CDH9-203ENST00000505045 Q56UQ5 140 aa3.58□□□□□ -1.84
CDH9-203ENST00000505045 MZT2BQ6NZ67 158 aa3.58□□□□□ -1.84
CDH9-203ENST00000505045 H2BFWTQ7Z2G1 175 aa3.58□□□□□ -1.84
CDH9-203ENST00000505045 HSD17B13Q7Z5P4 300 aaPredicted RBP3.58□□□□□ -1.84
CDH9-203ENST00000505045 ARRDC1Q8N5I2 433 aa3.58□□□□□ -1.84
CDH9-203ENST00000505045 FAM24BQ8N5W8 94 aa3.58□□□□□ -1.84
CDH9-203ENST00000505045 OR4C16Q8NGL9 310 aa3.58□□□□□ -1.84
CDH9-203ENST00000505045 OR1L6Q8NGR2 347 aa3.58□□□□□ -1.84
CDH9-203ENST00000505045 SMIM4Q8WVI0 70 aa3.58□□□□□ -1.84
CDH9-203ENST00000505045 AP3S1Q92572 193 aa3.58□□□□□ -1.84
CDH9-203ENST00000505045 OVOL2Q9BRP0 275 aa3.58□□□□□ -1.84
CDH9-203ENST00000505045 C5orf66Q9H5L9 145 aa3.58□□□□□ -1.84
CDH9-203ENST00000505045 FNDC4Q9H6D8 234 aaPredicted RBP3.58□□□□□ -1.84
CDH9-203ENST00000505045 FAM212BQ9NTI7 297 aaPredicted RBP3.58□□□□□ -1.84
CDH9-203ENST00000505045 THYN1Q9P016 225 aa3.58□□□□□ -1.84
CDH9-203ENST00000505045 RABL2BQ9UNT1 228 aa3.58□□□□□ -1.84
CDH9-203ENST00000505045 VPS13DQ5THJ4 4388 aa3.58□□□□□ -1.84
CDH9-203ENST00000505045 IGHV3-66A0A0C4DH42 116 aa3.58□□□□□ -1.84
CDH9-203ENST00000505045 C3orf85A0A1B0GTC6 90 aa3.58□□□□□ -1.84
CDH9-203ENST00000505045 A0A1B0GU03 582 aa3.58□□□□□ -1.84
CDH9-203ENST00000505045 GABARAPH6UMI1 98 aa3.58□□□□□ -1.84
CDH9-203ENST00000505045 TSPAN4O14817 238 aa3.58□□□□□ -1.84
CDH9-203ENST00000505045 PLA2G10O15496 165 aa3.58□□□□□ -1.84
CDH9-203ENST00000505045 NUPL2O15504 423 aaKnown RBP3.58□□□□□ -1.84
CDH9-203ENST00000505045 RGS5O15539 181 aa3.58□□□□□ -1.84
CDH9-203ENST00000505045 RAB3DO95716 219 aa3.58□□□□□ -1.84
CDH9-203ENST00000505045 CTSDP07339 412 aaPredicted RBP3.58□□□□□ -1.84
CDH9-203ENST00000505045 OR5AC1P0C628 307 aa3.58□□□□□ -1.84
CDH9-203ENST00000505045 RNASE2P10153 161 aaKnown RBP3.58□□□□□ -1.84
CDH9-203ENST00000505045 UCP1P25874 307 aa3.58□□□□□ -1.84
CDH9-203ENST00000505045 TFPI2P48307 235 aa3.58□□□□□ -1.84
CDH9-203ENST00000505045 CTAG1AP78358 180 aa3.58□□□□□ -1.84
CDH9-203ENST00000505045 ZNF79Q15937 498 aa3.58□□□□□ -1.84
CDH9-203ENST00000505045 LAMTOR1Q6IAA8 161 aa3.58□□□□□ -1.84
CDH9-203ENST00000505045 STEAP1BQ6NZ63 245 aa3.58□□□□□ -1.84
CDH9-203ENST00000505045 SLC16A13Q7RTY0 426 aa3.58□□□□□ -1.84
CDH9-203ENST00000505045 APRG1Q8IVJ8 170 aa3.58□□□□□ -1.84
CDH9-203ENST00000505045 DUSP18Q8NEJ0 188 aa3.58□□□□□ -1.84
CDH9-203ENST00000505045 OR4A16Q8NH70 328 aa3.58□□□□□ -1.84
CDH9-203ENST00000505045 ENKURQ8TC29 256 aa3.58□□□□□ -1.84
CDH9-203ENST00000505045 TMEM170AQ8WVE7 144 aa3.58□□□□□ -1.84
CDH9-203ENST00000505045 TMEM230Q96A57 120 aa3.58□□□□□ -1.84
CDH9-203ENST00000505045 OR10C1Q96KK4 312 aa3.58□□□□□ -1.84
CDH9-203ENST00000505045 HYLS1Q96M11 299 aa3.58□□□□□ -1.84
CDH9-203ENST00000505045 TMEM56Q96MV1 263 aa3.58□□□□□ -1.84
CDH9-203ENST00000505045 SPAG8Q99932 426 aaPredicted RBP3.58□□□□□ -1.84
CDH9-203ENST00000505045 RTBDNQ9BSG5 229 aaPredicted RBP3.58□□□□□ -1.84
CDH9-203ENST00000505045 GGTLC1Q9BX51 225 aa3.58□□□□□ -1.84
CDH9-203ENST00000505045 MRPL27Q9P0M9 148 aaKnown RBP3.58□□□□□ -1.84
CDH9-203ENST00000505045 UFC1Q9Y3C8 167 aa3.58□□□□□ -1.84
CDH9-203ENST00000505045 ALG5Q9Y673 324 aa3.58□□□□□ -1.84
CDH9-203ENST00000505045 LOC102724200A0A096LPH7 203 aaPredicted RBP3.57□□□□□ -1.84
CDH9-203ENST00000505045 IGHV7-4-1A0A0J9YVY3 117 aa3.57□□□□□ -1.84
CDH9-203ENST00000505045 LINC00854A0A1B0GVQ3 168 aa3.57□□□□□ -1.84
CDH9-203ENST00000505045 FABP12A6NFH5 140 aa3.57□□□□□ -1.84
CDH9-203ENST00000505045 C15orf62A8K5M9 175 aa3.57□□□□□ -1.84
CDH9-203ENST00000505045 CHEK1O14757 476 aa3.57□□□□□ -1.84
CDH9-203ENST00000505045 IFNA6P05013 189 aa3.57□□□□□ -1.84
CDH9-203ENST00000505045 RPL35AP18077 110 aaKnown RBP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms