RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 ARF6P62330 175 aa6.22□□□□□ -1.41
NEDD9-208ENST00000504387 TBR1Q16650 682 aa6.22□□□□□ -1.41
NEDD9-208ENST00000504387 LRRC10Q5BKY1 277 aa6.22□□□□□ -1.41
NEDD9-208ENST00000504387 LINC00322Q6ZN03 302 aaPredicted RBP6.22□□□□□ -1.41
NEDD9-208ENST00000504387 LINC00596Q86U02 117 aa6.22□□□□□ -1.41
NEDD9-208ENST00000504387 CD177Q8N6Q3 437 aa6.22□□□□□ -1.41
NEDD9-208ENST00000504387 OR1B1Q8NGR6 318 aa6.22□□□□□ -1.41
NEDD9-208ENST00000504387 GSX1Q9H4S2 264 aaPredicted RBP6.22□□□□□ -1.41
NEDD9-208ENST00000504387 OSTCQ9NRP0 149 aa6.22□□□□□ -1.41
NEDD9-208ENST00000504387 OR51B2Q9Y5P1 312 aa6.22□□□□□ -1.41
NEDD9-208ENST00000504387 TRBV9A0A0B4J1U6 114 aa6.22□□□□□ -1.41
NEDD9-208ENST00000504387 PGPA6NDG6 321 aa6.22□□□□□ -1.41
NEDD9-208ENST00000504387 C9JCJ5 164 aa6.22□□□□□ -1.41
NEDD9-208ENST00000504387 NPIPB11E5RHQ5 1161 aa6.22□□□□□ -1.41
NEDD9-208ENST00000504387 CHEK1O14757 476 aa6.22□□□□□ -1.41
NEDD9-208ENST00000504387 DNPH1O43598 174 aa6.22□□□□□ -1.41
NEDD9-208ENST00000504387 MPDU1O75352 247 aa6.22□□□□□ -1.41
NEDD9-208ENST00000504387 ZNF146Q15072 292 aa6.22□□□□□ -1.41
NEDD9-208ENST00000504387 C1orf210Q8IVY1 113 aa6.22□□□□□ -1.41
NEDD9-208ENST00000504387 TMUB1Q9BVT8 246 aa6.22□□□□□ -1.41
NEDD9-208ENST00000504387 GTSF1LQ9H1H1 148 aa6.22□□□□□ -1.41
NEDD9-208ENST00000504387 RELNP78509 3460 aa6.22□□□□□ -1.41
NEDD9-208ENST00000504387 SERTM2A0A1B0GWG4 89 aa6.21□□□□□ -1.41
NEDD9-208ENST00000504387 SP1P08047 785 aa6.21□□□□□ -1.41
NEDD9-208ENST00000504387 PRDX2P32119 198 aa6.21□□□□□ -1.41
NEDD9-208ENST00000504387 ERVK11-1P61568 191 aa6.21□□□□□ -1.41
NEDD9-208ENST00000504387 SMAGPQ0VAQ4 97 aa6.21□□□□□ -1.41
NEDD9-208ENST00000504387 MORN2Q502X0 79 aa6.21□□□□□ -1.41
NEDD9-208ENST00000504387 HES4Q9HCC6 221 aa6.21□□□□□ -1.41
NEDD9-208ENST00000504387 COL5A1P20908 1838 aaPredicted RBP6.21□□□□□ -1.41
NEDD9-208ENST00000504387 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.21□□□□□ -1.42
NEDD9-208ENST00000504387 SMIM27A0A1W2PRY6 76 aa6.21□□□□□ -1.42
NEDD9-208ENST00000504387 COX7A2P2O60397 106 aa6.21□□□□□ -1.42
NEDD9-208ENST00000504387 NCR2O95944 276 aa6.21□□□□□ -1.42
NEDD9-208ENST00000504387 FAM106CPP0CH98 169 aa6.21□□□□□ -1.42
NEDD9-208ENST00000504387 HTR1DP28221 377 aa6.21□□□□□ -1.42
NEDD9-208ENST00000504387 FAM106AQ4KMX7 169 aa6.21□□□□□ -1.42
NEDD9-208ENST00000504387 TMEM177Q53S58 311 aa6.21□□□□□ -1.42
NEDD9-208ENST00000504387 ZNF766Q5HY98 468 aa6.21□□□□□ -1.42
NEDD9-208ENST00000504387 RNFT1Q5M7Z0 435 aa6.21□□□□□ -1.42
NEDD9-208ENST00000504387 ACP7Q6ZNF0 438 aa6.21□□□□□ -1.42
NEDD9-208ENST00000504387 NPIPB3Q92617 1050 aa6.21□□□□□ -1.42
NEDD9-208ENST00000504387 TTTY13Q9BZ97 58 aa6.21□□□□□ -1.42
NEDD9-208ENST00000504387 TMEM167BQ9NRX6 74 aa6.21□□□□□ -1.42
NEDD9-208ENST00000504387 NTN3O00634 580 aaPredicted RBP6.21□□□□□ -1.42
NEDD9-208ENST00000504387 GPR183P32249 361 aa6.21□□□□□ -1.42
NEDD9-208ENST00000504387 NMUP48645 174 aa6.21□□□□□ -1.42
NEDD9-208ENST00000504387 MEF2CQ06413 473 aaPredicted RBP6.21□□□□□ -1.42
NEDD9-208ENST00000504387 HCP5Q6MZN7 132 aa6.21□□□□□ -1.42
NEDD9-208ENST00000504387 WDR82Q6UXN9 313 aa6.21□□□□□ -1.42
NEDD9-208ENST00000504387 ZBTB34Q8NCN2 500 aa6.21□□□□□ -1.42
NEDD9-208ENST00000504387 PERPQ96FX8 193 aa6.21□□□□□ -1.42
NEDD9-208ENST00000504387 ZZEF1O43149 2961 aa6.21□□□□□ -1.42
NEDD9-208ENST00000504387 SAA2-SAA4A0A096LPE2 208 aa6.2□□□□□ -1.42
NEDD9-208ENST00000504387 SRRM4A7MD48 611 aaKnown RBP6.2□□□□□ -1.42
NEDD9-208ENST00000504387 PRSS46E5RG02 174 aa6.2□□□□□ -1.42
NEDD9-208ENST00000504387 E7EUB6 86 aa6.2□□□□□ -1.42
NEDD9-208ENST00000504387 NKX2-8O15522 239 aa6.2□□□□□ -1.42
NEDD9-208ENST00000504387 SAA2P0DJI9 122 aaPredicted RBP6.2□□□□□ -1.42
NEDD9-208ENST00000504387 C8orf88P0DMB2 117 aa6.2□□□□□ -1.42
NEDD9-208ENST00000504387 NHLH1Q02575 133 aa6.2□□□□□ -1.42
NEDD9-208ENST00000504387 EIF4EBP1Q13541 118 aaPredicted RBP6.2□□□□□ -1.42
NEDD9-208ENST00000504387 VWA1Q6PCB0 445 aa6.2□□□□□ -1.42
NEDD9-208ENST00000504387 RBMXL3Q8N7X1 1067 aaKnown RBP6.2□□□□□ -1.42
NEDD9-208ENST00000504387 DAZAP1Q96EP5 407 aaKnown RBP6.2□□□□□ -1.42
NEDD9-208ENST00000504387 PAXXQ9BUH6 204 aa6.2□□□□□ -1.42
NEDD9-208ENST00000504387 TMEM191AQ9H0A3 160 aa6.2□□□□□ -1.42
NEDD9-208ENST00000504387 IGHV3-72A0A0B4J1Y9 119 aa6.2□□□□□ -1.42
NEDD9-208ENST00000504387 M0R1B8 84 aa6.2□□□□□ -1.42
NEDD9-208ENST00000504387 OR5AL1P0C617 328 aa6.2□□□□□ -1.42
NEDD9-208ENST00000504387 ACP1P24666 158 aa6.2□□□□□ -1.42
NEDD9-208ENST00000504387 HSPE1P61604 102 aaKnown RBP6.2□□□□□ -1.42
NEDD9-208ENST00000504387 BPIFA4PQ86YQ2 179 aa6.2□□□□□ -1.42
NEDD9-208ENST00000504387 C11orf53Q8IXP5 236 aa6.2□□□□□ -1.42
NEDD9-208ENST00000504387 Q8IYB0 196 aa6.2□□□□□ -1.42
NEDD9-208ENST00000504387 CIARTQ8N365 385 aaPredicted RBP6.2□□□□□ -1.42
NEDD9-208ENST00000504387 PNKDQ8N490 385 aa6.2□□□□□ -1.42
NEDD9-208ENST00000504387 DEFB125Q8N687 156 aa6.2□□□□□ -1.42
NEDD9-208ENST00000504387 FER1L6-AS1Q8NA97 138 aa6.2□□□□□ -1.42
NEDD9-208ENST00000504387 CORO2AQ92828 525 aa6.2□□□□□ -1.42
NEDD9-208ENST00000504387 C11orf52Q96A22 123 aa6.2□□□□□ -1.42
NEDD9-208ENST00000504387 TXNDC17Q9BRA2 123 aa6.2□□□□□ -1.42
NEDD9-208ENST00000504387 MAP1LC3CQ9BXW4 147 aa6.2□□□□□ -1.42
NEDD9-208ENST00000504387 THYN1Q9P016 225 aa6.2□□□□□ -1.42
NEDD9-208ENST00000504387 COLQQ9Y215 455 aaPredicted RBP6.2□□□□□ -1.42
NEDD9-208ENST00000504387 PEX7O00628 323 aa6.2□□□□□ -1.42
NEDD9-208ENST00000504387 DLX1P56177 255 aa6.2□□□□□ -1.42
NEDD9-208ENST00000504387 TAS2R45P59539 299 aa6.2□□□□□ -1.42
NEDD9-208ENST00000504387 PRR20EP86478 221 aa6.2□□□□□ -1.42
NEDD9-208ENST00000504387 PRR20CP86479 221 aa6.2□□□□□ -1.42
NEDD9-208ENST00000504387 PRR20DP86480 221 aa6.2□□□□□ -1.42
NEDD9-208ENST00000504387 PRR20BP86481 221 aa6.2□□□□□ -1.42
NEDD9-208ENST00000504387 PRR20AP86496 221 aa6.2□□□□□ -1.42
NEDD9-208ENST00000504387 OR4A5Q8NH83 315 aa6.2□□□□□ -1.42
NEDD9-208ENST00000504387 OR2V2Q96R30 315 aa6.2□□□□□ -1.42
NEDD9-208ENST00000504387 JMJD8Q96S16 334 aa6.2□□□□□ -1.42
NEDD9-208ENST00000504387 SLC25A33Q9BSK2 321 aa6.2□□□□□ -1.42
NEDD9-208ENST00000504387 SPRR3Q9UBC9 169 aa6.2□□□□□ -1.42
NEDD9-208ENST00000504387 TRAV9-1A0A075B6T8 112 aa6.19□□□□□ -1.42
NEDD9-208ENST00000504387 PPBPP02775 128 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms