RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 TYMSP04818 313 aa7.8□□□□□ -1.16
COL1A1-210ENST00000504289 S100A8P05109 93 aa7.8□□□□□ -1.16
COL1A1-210ENST00000504289 S100A9P06702 114 aaKnown RBP7.8□□□□□ -1.16
COL1A1-210ENST00000504289 PAX1P15863 534 aa7.8□□□□□ -1.16
COL1A1-210ENST00000504289 MFAP2P55001 183 aa7.8□□□□□ -1.16
COL1A1-210ENST00000504289 DSCR9P59020 149 aa7.8□□□□□ -1.16
COL1A1-210ENST00000504289 TAS2R60P59551 318 aa7.8□□□□□ -1.16
COL1A1-210ENST00000504289 FXYD3Q14802 87 aa7.8□□□□□ -1.16
COL1A1-210ENST00000504289 C16orf82Q7Z2V1 217 aa7.8□□□□□ -1.16
COL1A1-210ENST00000504289 TTC9CQ8N5M4 171 aa7.8□□□□□ -1.16
COL1A1-210ENST00000504289 ZNF503Q96F45 646 aa7.8□□□□□ -1.16
COL1A1-210ENST00000504289 TMEM68Q96MH6 324 aa7.8□□□□□ -1.16
COL1A1-210ENST00000504289 PIMREGQ9BSJ6 248 aa7.8□□□□□ -1.16
COL1A1-210ENST00000504289 THYN1Q9P016 225 aa7.8□□□□□ -1.16
COL1A1-210ENST00000504289 HILPDAQ9Y5L2 63 aa7.8□□□□□ -1.16
COL1A1-210ENST00000504289 ZNF462Q96JM2 2506 aa7.79□□□□□ -1.16
COL1A1-210ENST00000504289 MDFIC2A0A1B0GVS7 189 aa7.79□□□□□ -1.16
COL1A1-210ENST00000504289 HELTA6NFD8 242 aa7.79□□□□□ -1.16
COL1A1-210ENST00000504289 FCN1O00602 326 aa7.79□□□□□ -1.16
COL1A1-210ENST00000504289 EIF3GO75821 320 aaKnown RBP eCLIP7.79□□□□□ -1.16
COL1A1-210ENST00000504289 HLA-DRB1P01911 266 aa7.79□□□□□ -1.16
COL1A1-210ENST00000504289 OR10J4P0C629 311 aa7.79□□□□□ -1.16
COL1A1-210ENST00000504289 IGLC1P0CG04 106 aa7.79□□□□□ -1.16
COL1A1-210ENST00000504289 HIST1H1BP16401 226 aaKnown RBP7.79□□□□□ -1.16
COL1A1-210ENST00000504289 S100A7P31151 101 aa7.79□□□□□ -1.16
COL1A1-210ENST00000504289 GALR1P47211 349 aa7.79□□□□□ -1.16
COL1A1-210ENST00000504289 FAM3BP58499 235 aaPredicted RBP7.79□□□□□ -1.16
COL1A1-210ENST00000504289 UBE2L3P68036 154 aaKnown RBP7.79□□□□□ -1.16
COL1A1-210ENST00000504289 RPL19P84098 196 aaKnown RBP7.79□□□□□ -1.16
COL1A1-210ENST00000504289 PATE2Q6UY27 113 aa7.79□□□□□ -1.16
COL1A1-210ENST00000504289 LHFPL4Q7Z7J7 247 aa7.79□□□□□ -1.16
COL1A1-210ENST00000504289 OR5AU1Q8NGC0 362 aa7.79□□□□□ -1.16
COL1A1-210ENST00000504289 C2CD4CQ8TF44 421 aa7.79□□□□□ -1.16
COL1A1-210ENST00000504289 SMIM12Q96EX1 92 aa7.79□□□□□ -1.16
COL1A1-210ENST00000504289 TBX15Q96SF7 602 aa7.79□□□□□ -1.16
COL1A1-210ENST00000504289 TXN2Q99757 166 aa7.79□□□□□ -1.16
COL1A1-210ENST00000504289 PAXXQ9BUH6 204 aa7.79□□□□□ -1.16
COL1A1-210ENST00000504289 SLC25A2Q9BXI2 301 aa7.79□□□□□ -1.16
COL1A1-210ENST00000504289 BPESC1Q9GZL8 116 aa7.79□□□□□ -1.16
COL1A1-210ENST00000504289 WNT10AQ9GZT5 417 aa7.79□□□□□ -1.16
COL1A1-210ENST00000504289 OR51M1Q9H341 326 aa7.79□□□□□ -1.16
COL1A1-210ENST00000504289 SAV1Q9H4B6 383 aaPredicted RBP7.79□□□□□ -1.16
COL1A1-210ENST00000504289 ZNF355PQ9NSJ1 428 aa7.79□□□□□ -1.16
COL1A1-210ENST00000504289 TMEM14CQ9P0S9 112 aa7.79□□□□□ -1.16
COL1A1-210ENST00000504289 TGIF2-C20orf24A0A0A6YYL0 155 aa7.78□□□□□ -1.16
COL1A1-210ENST00000504289 SCO2A0A1W2PP80 73 aa7.78□□□□□ -1.16
COL1A1-210ENST00000504289 VWC2LB2RUY7 222 aa7.78□□□□□ -1.16
COL1A1-210ENST00000504289 PPP5D1E7EU14 171 aa7.78□□□□□ -1.16
COL1A1-210ENST00000504289 NDUFS7O75251 213 aa7.78□□□□□ -1.16
COL1A1-210ENST00000504289 IGHV4-39P01824 125 aa7.78□□□□□ -1.16
COL1A1-210ENST00000504289 REG1AP05451 166 aa7.78□□□□□ -1.16
COL1A1-210ENST00000504289 CXCL1P09341 107 aa7.78□□□□□ -1.16
COL1A1-210ENST00000504289 GATA2P23769 480 aaPredicted RBP7.78□□□□□ -1.16
COL1A1-210ENST00000504289 FCGR2BP31994 310 aaPredicted RBP7.78□□□□□ -1.16
COL1A1-210ENST00000504289 DLX1P56177 255 aa7.78□□□□□ -1.16
COL1A1-210ENST00000504289 YPEL3P61236 119 aaPredicted RBP7.78□□□□□ -1.16
COL1A1-210ENST00000504289 ZNF90Q03938 601 aa7.78□□□□□ -1.16
COL1A1-210ENST00000504289 PAX8Q06710 450 aa7.78□□□□□ -1.16
COL1A1-210ENST00000504289 KLRD1Q13241 179 aa7.78□□□□□ -1.16
COL1A1-210ENST00000504289 HES1Q14469 280 aa7.78□□□□□ -1.16
COL1A1-210ENST00000504289 ZNF343Q6P1L6 599 aa7.78□□□□□ -1.16
COL1A1-210ENST00000504289 LINC00305Q7Z4B0 112 aa7.78□□□□□ -1.16
COL1A1-210ENST00000504289 C10orf105Q8TEF2 133 aa7.78□□□□□ -1.16
COL1A1-210ENST00000504289 FAM168AQ92567 244 aa7.78□□□□□ -1.16
COL1A1-210ENST00000504289 ARPC1AQ92747 370 aa7.78□□□□□ -1.16
COL1A1-210ENST00000504289 SFRP2Q96HF1 295 aa7.78□□□□□ -1.16
COL1A1-210ENST00000504289 CCL19Q99731 98 aa7.78□□□□□ -1.16
COL1A1-210ENST00000504289 RASL11BQ9BPW5 248 aa7.78□□□□□ -1.16
COL1A1-210ENST00000504289 CDC42EP3Q9UKI2 254 aa7.78□□□□□ -1.16
COL1A1-210ENST00000504289 URGCP-MRPS24S4R325 110 aa7.78□□□□□ -1.16
COL1A1-210ENST00000504289 LRBAP50851 2863 aa7.78□□□□□ -1.16
COL1A1-210ENST00000504289 PLXNB1O43157 2135 aa7.78□□□□□ -1.16
COL1A1-210ENST00000504289 MYO18BQ8IUG5 2567 aa7.77□□□□□ -1.16
COL1A1-210ENST00000504289 TRBV20OR9-2A0A075B6H5 130 aa7.77□□□□□ -1.17
COL1A1-210ENST00000504289 IGLV11-55A0A075B6I3 123 aa7.77□□□□□ -1.17
COL1A1-210ENST00000504289 K7EIM0 57 aa7.77□□□□□ -1.17
COL1A1-210ENST00000504289 TMEM11P17152 192 aa7.77□□□□□ -1.17
COL1A1-210ENST00000504289 RPL35P42766 123 aaKnown RBP7.77□□□□□ -1.17
COL1A1-210ENST00000504289 GNG4P50150 75 aa7.77□□□□□ -1.17
COL1A1-210ENST00000504289 MFAP4P55083 255 aa7.77□□□□□ -1.17
COL1A1-210ENST00000504289 CX3CL1P78423 397 aa7.77□□□□□ -1.17
COL1A1-210ENST00000504289 KIAA0141Q14154 515 aaPredicted RBP7.77□□□□□ -1.17
COL1A1-210ENST00000504289 TIGITQ495A1 244 aa7.77□□□□□ -1.17
COL1A1-210ENST00000504289 TEX38Q6PEX7 206 aa7.77□□□□□ -1.17
COL1A1-210ENST00000504289 CLEC2AQ6UVW9 174 aa7.77□□□□□ -1.17
COL1A1-210ENST00000504289 OR10G8Q8NGN5 311 aa7.77□□□□□ -1.17
COL1A1-210ENST00000504289 OCC1Q8TAD7 63 aa7.77□□□□□ -1.17
COL1A1-210ENST00000504289 FXYD5Q96DB9 178 aa7.77□□□□□ -1.17
COL1A1-210ENST00000504289 ATP6V0BQ99437 205 aa7.77□□□□□ -1.17
COL1A1-210ENST00000504289 OSTCQ9NRP0 149 aa7.77□□□□□ -1.17
COL1A1-210ENST00000504289 GAR1Q9NY12 217 aaKnown RBP7.77□□□□□ -1.17
COL1A1-210ENST00000504289 MRPL36Q9P0J6 103 aaKnown RBP7.77□□□□□ -1.17
COL1A1-210ENST00000504289 HIGD1AQ9Y241 93 aa7.77□□□□□ -1.17
COL1A1-210ENST00000504289 DMRT1Q9Y5R6 373 aa7.77□□□□□ -1.17
COL1A1-210ENST00000504289 TENM4Q6N022 2769 aa7.76□□□□□ -1.17
COL1A1-210ENST00000504289 GGTLC3B5MD39 225 aa7.76□□□□□ -1.17
COL1A1-210ENST00000504289 ISLRO14498 428 aa7.76□□□□□ -1.17
COL1A1-210ENST00000504289 NPFFO15130 113 aa7.76□□□□□ -1.17
COL1A1-210ENST00000504289 TOMM40O96008 361 aa7.76□□□□□ -1.17
COL1A1-210ENST00000504289 PRB1P04280 392 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms