RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 RARRES2Q99969 163 aa8.82□□□□□ -1
MED28-203ENST00000503945 SOSTQ9BQB4 213 aa8.82□□□□□ -1
MED28-203ENST00000503945 ZFAND3Q9H8U3 227 aa8.82□□□□□ -1
MED28-203ENST00000503945 RABAC1Q9UI14 185 aa8.82□□□□□ -1
MED28-203ENST00000503945 U3KQ87 197 aa8.82□□□□□ -1
MED28-203ENST00000503945 TRAV2A0A0B4J234 112 aa8.81□□□□□ -1
MED28-203ENST00000503945 H3BMQ9 156 aa8.81□□□□□ -1
MED28-203ENST00000503945 IFNA10P01566 189 aa8.81□□□□□ -1
MED28-203ENST00000503945 CRYBB3P26998 211 aa8.81□□□□□ -1
MED28-203ENST00000503945 FAUP35544 74 aaKnown RBP8.81□□□□□ -1
MED28-203ENST00000503945 EIF2B2P49770 351 aaKnown RBP8.81□□□□□ -1
MED28-203ENST00000503945 CCR6P51684 374 aa8.81□□□□□ -1
MED28-203ENST00000503945 AP2S1P53680 142 aaPredicted RBP8.81□□□□□ -1
MED28-203ENST00000503945 TMEM187Q14656 261 aa8.81□□□□□ -1
MED28-203ENST00000503945 ZNF124Q15973 351 aa8.81□□□□□ -1
MED28-203ENST00000503945 TIGITQ495A1 244 aa8.81□□□□□ -1
MED28-203ENST00000503945 PRSS54Q6PEW0 395 aa8.81□□□□□ -1
MED28-203ENST00000503945 SLC24A4Q8NFF2 622 aa8.81□□□□□ -1
MED28-203ENST00000503945 OR1S2Q8NGQ3 325 aa8.81□□□□□ -1
MED28-203ENST00000503945 GATAD1Q8WUU5 269 aa8.81□□□□□ -1
MED28-203ENST00000503945 SLIRPQ9GZT3 109 aaKnown RBP8.81□□□□□ -1
MED28-203ENST00000503945 MRPL36Q9P0J6 103 aaKnown RBP8.81□□□□□ -1
MED28-203ENST00000503945 A0A0B4J2A0 478 aa8.8□□□□□ -1
MED28-203ENST00000503945 IGKV1-17P01599 117 aa8.8□□□□□ -1
MED28-203ENST00000503945 ATF4P18848 351 aaPredicted RBP8.8□□□□□ -1
MED28-203ENST00000503945 OR10J1P30954 320 aa8.8□□□□□ -1
MED28-203ENST00000503945 ATP5IP56385 69 aaPredicted RBP8.8□□□□□ -1
MED28-203ENST00000503945 AP3S2P59780 193 aa8.8□□□□□ -1
MED28-203ENST00000503945 DEFB131AP59861 70 aa8.8□□□□□ -1
MED28-203ENST00000503945 YPEL3P61236 119 aaPredicted RBP8.8□□□□□ -1
MED28-203ENST00000503945 PMS2P11Q13670 270 aa8.8□□□□□ -1
MED28-203ENST00000503945 PYDC2Q56P42 97 aa8.8□□□□□ -1
MED28-203ENST00000503945 NMSQ5H8A3 153 aa8.8□□□□□ -1
MED28-203ENST00000503945 LEMD1Q68G75 181 aa8.8□□□□□ -1
MED28-203ENST00000503945 LGI3Q8N145 548 aa8.8□□□□□ -1
MED28-203ENST00000503945 SHPKQ9UHJ6 478 aa8.8□□□□□ -1
MED28-203ENST00000503945 KLK5Q9Y337 293 aaPredicted RBP8.8□□□□□ -1
MED28-203ENST00000503945 NUPR2A6NF83 97 aa8.79□□□□□ -1
MED28-203ENST00000503945 HELTA6NFD8 242 aa8.79□□□□□ -1
MED28-203ENST00000503945 CCDC160A6NGH7 325 aa8.79□□□□□ -1
MED28-203ENST00000503945 NXPH3O95157 252 aa8.79□□□□□ -1
MED28-203ENST00000503945 RD3LP0DJH9 198 aa8.79□□□□□ -1
MED28-203ENST00000503945 S100A5P33763 92 aa8.79□□□□□ -1
MED28-203ENST00000503945 P2RY1P47900 373 aa8.79□□□□□ -1
MED28-203ENST00000503945 RND2P52198 227 aa8.79□□□□□ -1
MED28-203ENST00000503945 SRPXP78539 464 aa8.79□□□□□ -1
MED28-203ENST00000503945 SMCO1Q147U7 214 aa8.79□□□□□ -1
MED28-203ENST00000503945 RBMS2Q15434 407 aaKnown RBP8.79□□□□□ -1
MED28-203ENST00000503945 CEMP1Q6PRD7 247 aaPredicted RBP8.79□□□□□ -1
MED28-203ENST00000503945 LYZL2Q7Z4W2 148 aa8.79□□□□□ -1
MED28-203ENST00000503945 STHQ8IWL8 128 aa8.79□□□□□ -1
MED28-203ENST00000503945 TOMM5Q8N4H5 51 aa8.79□□□□□ -1
MED28-203ENST00000503945 STXBP6Q8NFX7 210 aa8.79□□□□□ -1
MED28-203ENST00000503945 OR11H2Q8NH07 326 aa8.79□□□□□ -1
MED28-203ENST00000503945 NPIPB3Q92617 1050 aa8.79□□□□□ -1
MED28-203ENST00000503945 FRAS1Q86XX4 4008 aa8.78□□□□□ -1
MED28-203ENST00000503945 IFNA4P05014 189 aa8.78□□□□□ -1
MED28-203ENST00000503945 HNRNPCP07910 306 aaKnown RBP eCLIP8.78□□□□□ -1
MED28-203ENST00000503945 IGLC1P0CG04 106 aa8.78□□□□□ -1
MED28-203ENST00000503945 NPY1RP25929 384 aa8.78□□□□□ -1
MED28-203ENST00000503945 KLF9Q13886 244 aaPredicted RBP8.78□□□□□ -1
MED28-203ENST00000503945 TMEM128Q5BJH2 165 aa8.78□□□□□ -1
MED28-203ENST00000503945 OR1S1Q8NH92 325 aa8.78□□□□□ -1
MED28-203ENST00000503945 ACY3Q96HD9 319 aa8.78□□□□□ -1
MED28-203ENST00000503945 PRR13Q9NZ81 148 aa8.78□□□□□ -1
MED28-203ENST00000503945 PFDN2Q9UHV9 154 aa8.78□□□□□ -1
MED28-203ENST00000503945 K7EQG2 157 aa8.77□□□□□ -1.01
MED28-203ENST00000503945 LY6G6CO95867 125 aa8.77□□□□□ -1.01
MED28-203ENST00000503945 CA1P00915 261 aaPredicted RBP8.77□□□□□ -1.01
MED28-203ENST00000503945 GPX4P36969 197 aaPredicted RBP8.77□□□□□ -1.01
MED28-203ENST00000503945 SUPT4H1P63272 117 aaKnown RBP8.77□□□□□ -1.01
MED28-203ENST00000503945 EWSR1Q01844 656 aaKnown RBP eCLIP8.77□□□□□ -1.01
MED28-203ENST00000503945 TMED4Q7Z7H5 227 aa8.77□□□□□ -1.01
MED28-203ENST00000503945 DTD1Q8TEA8 209 aa8.77□□□□□ -1.01
MED28-203ENST00000503945 LINC00476Q8WZB0 136 aa8.77□□□□□ -1.01
MED28-203ENST00000503945 SLC25A21Q9BQT8 299 aaPredicted RBP8.77□□□□□ -1.01
MED28-203ENST00000503945 RBKSQ9H477 322 aa8.77□□□□□ -1.01
MED28-203ENST00000503945 HSPB7Q9UBY9 170 aa8.77□□□□□ -1.01
MED28-203ENST00000503945 U3KQE9 123 aa8.77□□□□□ -1.01
MED28-203ENST00000503945 IL4P05112 153 aa8.76□□□□□ -1.01
MED28-203ENST00000503945 DHRS2Q13268 280 aa8.76□□□□□ -1.01
MED28-203ENST00000503945 TMEM41BQ5BJD5 291 aa8.76□□□□□ -1.01
MED28-203ENST00000503945 C16orf54Q6UWD8 224 aa8.76□□□□□ -1.01
MED28-203ENST00000503945 FAM24BQ8N5W8 94 aa8.76□□□□□ -1.01
MED28-203ENST00000503945 C11orf45Q8TAV5 145 aa8.76□□□□□ -1.01
MED28-203ENST00000503945 TMEM170AQ8WVE7 144 aa8.76□□□□□ -1.01
MED28-203ENST00000503945 DEDD2Q8WXF8 326 aa8.76□□□□□ -1.01
MED28-203ENST00000503945 KMT2AQ03164 3969 aa8.76□□□□□ -1.01
MED28-203ENST00000503945 DNAH10Q8IVF4 4471 aa8.75□□□□□ -1.01
MED28-203ENST00000503945 DUXBA0A1W2PPF3 345 aa8.75□□□□□ -1.01
MED28-203ENST00000503945 SNRPGP15A8MWD9 76 aa8.75□□□□□ -1.01
MED28-203ENST00000503945 TOMM40O96008 361 aa8.75□□□□□ -1.01
MED28-203ENST00000503945 FABP1P07148 127 aa8.75□□□□□ -1.01
MED28-203ENST00000503945 PSG1P11464 419 aa8.75□□□□□ -1.01
MED28-203ENST00000503945 SNRPD3P62318 126 aaKnown RBP8.75□□□□□ -1.01
MED28-203ENST00000503945 RAB11AP62491 216 aa8.75□□□□□ -1.01
MED28-203ENST00000503945 RPP30P78346 268 aaKnown RBP8.75□□□□□ -1.01
MED28-203ENST00000503945 DMRTA1Q5VZB9 504 aa8.75□□□□□ -1.01
MED28-203ENST00000503945 MORN3Q6PF18 240 aaPredicted RBP8.75□□□□□ -1.01
MED28-203ENST00000503945 OR51G1Q8NGK1 321 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms