RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 GPR146Q96CH1 333 aa11.97□□□□□ -0.49
SCLT1-204ENST00000503215 GALNT14Q96FL9 552 aa11.97□□□□□ -0.49
SCLT1-204ENST00000503215 DIRAS2Q96HU8 199 aa11.97□□□□□ -0.49
SCLT1-204ENST00000503215 VSIRQ9H7M9 311 aa11.97□□□□□ -0.49
SCLT1-204ENST00000503215 NAA60Q9H7X0 242 aa11.97□□□□□ -0.49
SCLT1-204ENST00000503215 TP53TG1Q9Y2A0 90 aa11.97□□□□□ -0.49
SCLT1-204ENST00000503215 TEX13DA0A0J9YY54 714 aaPredicted RBP11.96□□□□□ -0.49
SCLT1-204ENST00000503215 UBE2CO00762 179 aa11.96□□□□□ -0.49
SCLT1-204ENST00000503215 ATG12O94817 140 aa11.96□□□□□ -0.49
SCLT1-204ENST00000503215 BMI1P35226 326 aa11.96□□□□□ -0.49
SCLT1-204ENST00000503215 SSBP1Q04837 148 aaKnown RBP11.96□□□□□ -0.49
SCLT1-204ENST00000503215 IL18Q14116 193 aa11.96□□□□□ -0.49
SCLT1-204ENST00000503215 BSXQ3C1V8 233 aa11.96□□□□□ -0.49
SCLT1-204ENST00000503215 TRIQKQ629K1 86 aa11.96□□□□□ -0.49
SCLT1-204ENST00000503215 ZNF600Q6ZNG1 722 aa11.96□□□□□ -0.49
SCLT1-204ENST00000503215 OR51S1Q8NGJ8 323 aa11.96□□□□□ -0.49
SCLT1-204ENST00000503215 PDCD10Q9BUL8 212 aa11.96□□□□□ -0.49
SCLT1-204ENST00000503215 GPR132Q9UNW8 380 aa11.96□□□□□ -0.49
SCLT1-204ENST00000503215 C14orf166Q9Y224 244 aaKnown RBP11.96□□□□□ -0.49
SCLT1-204ENST00000503215 TMA7Q9Y2S6 64 aaKnown RBP11.96□□□□□ -0.49
SCLT1-204ENST00000503215 CXorf65A6NEN9 183 aa11.95□□□□□ -0.5
SCLT1-204ENST00000503215 PLA2G10O15496 165 aa11.95□□□□□ -0.5
SCLT1-204ENST00000503215 JTBO76095 146 aa11.95□□□□□ -0.5
SCLT1-204ENST00000503215 IGKV1-17P01599 117 aa11.95□□□□□ -0.5
SCLT1-204ENST00000503215 OPRK1P41145 380 aa11.95□□□□□ -0.5
SCLT1-204ENST00000503215 SUB1P53999 127 aaKnown RBP eCLIP11.95□□□□□ -0.55e-7■■■■■ 33
SCLT1-204ENST00000503215 SPCS3P61009 180 aa11.95□□□□□ -0.5
SCLT1-204ENST00000503215 MRPS10P82664 201 aaKnown RBP11.95□□□□□ -0.5
SCLT1-204ENST00000503215 TNFRSF9Q07011 255 aa11.95□□□□□ -0.5
SCLT1-204ENST00000503215 TIGITQ495A1 244 aa11.95□□□□□ -0.5
SCLT1-204ENST00000503215 AARDQ4LEZ3 155 aa11.95□□□□□ -0.5
SCLT1-204ENST00000503215 TMEM170AQ8WVE7 144 aa11.95□□□□□ -0.5
SCLT1-204ENST00000503215 MS4A6AQ9H2W1 248 aa11.95□□□□□ -0.5
SCLT1-204ENST00000503215 ENY2Q9NPA8 101 aa11.95□□□□□ -0.5
SCLT1-204ENST00000503215 CACNG5Q9UF02 275 aa11.95□□□□□ -0.5
SCLT1-204ENST00000503215 ALMS1Q8TCU4 4167 aa11.94□□□□□ -0.5
SCLT1-204ENST00000503215 CRYM-AS1A6NIL9 109 aa11.94□□□□□ -0.5
SCLT1-204ENST00000503215 DISC1C4P0D8 188 aa11.94□□□□□ -0.5
SCLT1-204ENST00000503215 CTDSPLO15194 276 aa11.94□□□□□ -0.5
SCLT1-204ENST00000503215 CLN5O75503 358 aa11.94□□□□□ -0.5
SCLT1-204ENST00000503215 NXPH3O95157 252 aa11.94□□□□□ -0.5
SCLT1-204ENST00000503215 AKAIN1P0CW23 69 aa11.94□□□□□ -0.5
SCLT1-204ENST00000503215 C4BPBP20851 252 aa11.94□□□□□ -0.5
SCLT1-204ENST00000503215 PYDC2Q56P42 97 aa11.94□□□□□ -0.5
SCLT1-204ENST00000503215 LEMD1Q68G75 181 aa11.94□□□□□ -0.5
SCLT1-204ENST00000503215 OR4X1Q8NH49 305 aa11.94□□□□□ -0.5
SCLT1-204ENST00000503215 RBPMSQ93062 196 aaKnown RBP11.94□□□□□ -0.5
SCLT1-204ENST00000503215 TMEM230Q96A57 120 aa11.94□□□□□ -0.5
SCLT1-204ENST00000503215 GINS3Q9BRX5 216 aa11.94□□□□□ -0.5
SCLT1-204ENST00000503215 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.94□□□□□ -0.5
SCLT1-204ENST00000503215 FAM240BA0A1B0GVZ2 78 aa11.93□□□□□ -0.5
SCLT1-204ENST00000503215 ANKRD20A5PA0PJZ0 165 aa11.93□□□□□ -0.5
SCLT1-204ENST00000503215 LYRM1O43325 122 aa11.93□□□□□ -0.5
SCLT1-204ENST00000503215 RPL11P62913 178 aaKnown RBP11.93□□□□□ -0.5
SCLT1-204ENST00000503215 TMEM268Q5VZI3 342 aa11.93□□□□□ -0.5
SCLT1-204ENST00000503215 FAM122CQ6P4D5 195 aa11.93□□□□□ -0.5
SCLT1-204ENST00000503215 CSTL1Q9H114 145 aa11.93□□□□□ -0.5
SCLT1-204ENST00000503215 RABL2AQ9UBK7 228 aaPredicted RBP11.93□□□□□ -0.5
SCLT1-204ENST00000503215 RABL2BQ9UNT1 228 aa11.93□□□□□ -0.5
SCLT1-204ENST00000503215 ALG5Q9Y673 324 aa11.93□□□□□ -0.5
SCLT1-204ENST00000503215 CORTO00230 105 aa11.92□□□□□ -0.5
SCLT1-204ENST00000503215 B3GALNT1O75752 331 aa11.92□□□□□ -0.5
SCLT1-204ENST00000503215 IFNA7P01567 189 aa11.92□□□□□ -0.5
SCLT1-204ENST00000503215 DEFB131AP59861 70 aa11.92□□□□□ -0.5
SCLT1-204ENST00000503215 DHODHQ02127 395 aa11.92□□□□□ -0.5
SCLT1-204ENST00000503215 SURF2Q15527 256 aaPredicted RBP11.92□□□□□ -0.5
SCLT1-204ENST00000503215 FAM219AQ8IW50 185 aa11.92□□□□□ -0.5
SCLT1-204ENST00000503215 OR52E5Q8NH55 327 aa11.92□□□□□ -0.5
SCLT1-204ENST00000503215 LRRC20Q8TCA0 184 aa11.92□□□□□ -0.5
SCLT1-204ENST00000503215 HEYLQ9NQ87 328 aaPredicted RBP11.92□□□□□ -0.5
SCLT1-204ENST00000503215 TMEM56-RWDD3S4R434 201 aa11.92□□□□□ -0.5
SCLT1-204ENST00000503215 MPTX1A8MV57 137 aa11.92□□□□□ -0.5
SCLT1-204ENST00000503215 DNASE2O00115 360 aaPredicted RBP11.92□□□□□ -0.5
SCLT1-204ENST00000503215 GSTZ1O43708 216 aaPredicted RBP11.92□□□□□ -0.5
SCLT1-204ENST00000503215 NPPCP23582 126 aa11.92□□□□□ -0.5
SCLT1-204ENST00000503215 TMEM187Q14656 261 aa11.92□□□□□ -0.5
SCLT1-204ENST00000503215 RBMS2Q15434 407 aaKnown RBP11.92□□□□□ -0.5
SCLT1-204ENST00000503215 CLLU1Q5K131 121 aa11.92□□□□□ -0.5
SCLT1-204ENST00000503215 PRSS54Q6PEW0 395 aa11.92□□□□□ -0.5
SCLT1-204ENST00000503215 AGRNO00468 2067 aa11.91□□□□□ -0.5
SCLT1-204ENST00000503215 C7orf66A4D0T2 115 aa11.91□□□□□ -0.5
SCLT1-204ENST00000503215 CEBPZOSA8MTT3 80 aa11.91□□□□□ -0.5
SCLT1-204ENST00000503215 INMT-MINDY4F8WBC2 141 aa11.91□□□□□ -0.5
SCLT1-204ENST00000503215 CRYBB3P26998 211 aa11.91□□□□□ -0.5
SCLT1-204ENST00000503215 INPP1P49441 399 aa11.91□□□□□ -0.5
SCLT1-204ENST00000503215 RND2P52198 227 aa11.91□□□□□ -0.5
SCLT1-204ENST00000503215 CMC4P56277 68 aaPredicted RBP11.91□□□□□ -0.5
SCLT1-204ENST00000503215 PAFAH1B2P68402 229 aa11.91□□□□□ -0.5
SCLT1-204ENST00000503215 CEMP1Q6PRD7 247 aaPredicted RBP11.91□□□□□ -0.5
SCLT1-204ENST00000503215 TEX261Q6UWH6 196 aa11.91□□□□□ -0.5
SCLT1-204ENST00000503215 C9orf62Q8N4C0 152 aa11.91□□□□□ -0.5
SCLT1-204ENST00000503215 PRRT1Q99946 306 aa11.91□□□□□ -0.5
SCLT1-204ENST00000503215 C7orf50Q9BRJ6 194 aaKnown RBP11.91□□□□□ -0.5
SCLT1-204ENST00000503215 MED9Q9NWA0 146 aa11.91□□□□□ -0.5
SCLT1-204ENST00000503215 RABAC1Q9UI14 185 aa11.91□□□□□ -0.5
SCLT1-204ENST00000503215 HSPB11Q9Y547 144 aa11.91□□□□□ -0.5
SCLT1-204ENST00000503215 U3KQ87 197 aa11.91□□□□□ -0.5
SCLT1-204ENST00000503215 IGLC1P0CG04 106 aa11.9□□□□□ -0.5
SCLT1-204ENST00000503215 P2RY1P47900 373 aa11.9□□□□□ -0.5
SCLT1-204ENST00000503215 SUPT4H1P63272 117 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms