RNA–Protein interactions for RNA: ENST00000503057.5

LIMCH1-205, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-205ENST00000503057 RNASE2P10153 161 aaKnown RBP8.81□□□□□ -1
LIMCH1-205ENST00000503057 C10orf55Q5SWW7 151 aa8.81□□□□□ -1
LIMCH1-205ENST00000503057 PIP4P1Q86T03 277 aa8.81□□□□□ -1
LIMCH1-205ENST00000503057 TSKUQ8WUA8 353 aa8.81□□□□□ -1
LIMCH1-205ENST00000503057 COL25A1Q9BXS0 654 aaPredicted RBP8.81□□□□□ -1
LIMCH1-205ENST00000503057 S4R3C0 116 aa8.81□□□□□ -1
LIMCH1-205ENST00000503057 MYOD1P15172 320 aa8.8□□□□□ -1
LIMCH1-205ENST00000503057 TM4SF20Q53R12 229 aa8.8□□□□□ -1
LIMCH1-205ENST00000503057 CYB5R2Q6BCY4 276 aa8.8□□□□□ -1
LIMCH1-205ENST00000503057 RAXQ9Y2V3 346 aa8.8□□□□□ -1
LIMCH1-205ENST00000503057 C10orf142B7Z368 130 aa8.8□□□□□ -1
LIMCH1-205ENST00000503057 HINT1P49773 126 aaPredicted RBP8.8□□□□□ -1
LIMCH1-205ENST00000503057 FOXA3P55318 350 aaPredicted RBP8.8□□□□□ -1
LIMCH1-205ENST00000503057 ATP5J2P56134 94 aa8.8□□□□□ -1
LIMCH1-205ENST00000503057 RASL11AQ6T310 242 aa8.8□□□□□ -1
LIMCH1-205ENST00000503057 PMCHL2Q9BQD1 86 aa8.8□□□□□ -1
LIMCH1-205ENST00000503057 AP5S1Q9NUS5 200 aa8.8□□□□□ -1
LIMCH1-205ENST00000503057 CGB1A6NKQ9 187 aa8.8□□□□□ -1
LIMCH1-205ENST00000503057 WFDC3Q8IUB2 231 aa8.8□□□□□ -1
LIMCH1-205ENST00000503057 CEACAM8P31997 349 aaPredicted RBP8.8□□□□□ -1
LIMCH1-205ENST00000503057 C17orf58Q2M2W7 97 aa8.8□□□□□ -1
LIMCH1-205ENST00000503057 FAM106AQ4KMX7 169 aa8.8□□□□□ -1
LIMCH1-205ENST00000503057 A0A1B0GV90 55 aa8.79□□□□□ -1
LIMCH1-205ENST00000503057 PRB3Q04118 309 aaPredicted RBP8.79□□□□□ -1
LIMCH1-205ENST00000503057 LEMD1Q68G75 181 aa8.79□□□□□ -1
LIMCH1-205ENST00000503057 NRN1Q9NPD7 142 aa8.79□□□□□ -1
LIMCH1-205ENST00000503057 VDAC2P45880 294 aaPredicted RBP8.79□□□□□ -1
LIMCH1-205ENST00000503057 IGKV1-16P04430 117 aa8.79□□□□□ -1
LIMCH1-205ENST00000503057 COX6B1P14854 86 aa8.79□□□□□ -1
LIMCH1-205ENST00000503057 GPR183P32249 361 aa8.79□□□□□ -1
LIMCH1-205ENST00000503057 NMUP48645 174 aa8.79□□□□□ -1
LIMCH1-205ENST00000503057 DNLZQ5SXM8 178 aa8.79□□□□□ -1
LIMCH1-205ENST00000503057 TPTE2P1Q5T6R2 138 aa8.79□□□□□ -1
LIMCH1-205ENST00000503057 EBLN2Q6P2I7 272 aa8.79□□□□□ -1
LIMCH1-205ENST00000503057 BUB1B-PAK6H3BSN5 160 aa8.79□□□□□ -1
LIMCH1-205ENST00000503057 Q1RN00 199 aa8.79□□□□□ -1
LIMCH1-205ENST00000503057 ZNF833PQ6ZTB9 187 aa8.79□□□□□ -1
LIMCH1-205ENST00000503057 HAPLN4Q86UW8 402 aa8.79□□□□□ -1
LIMCH1-205ENST00000503057 ATOH7Q8N100 152 aa8.79□□□□□ -1
LIMCH1-205ENST00000503057 NDUFAF3Q9BU61 184 aa8.79□□□□□ -1
LIMCH1-205ENST00000503057 IGLV3-9A0A075B6K5 115 aa8.78□□□□□ -1
LIMCH1-205ENST00000503057 TRGV3P03979 118 aa8.78□□□□□ -1
LIMCH1-205ENST00000503057 TEX36Q5VZQ5 186 aa8.78□□□□□ -1
LIMCH1-205ENST00000503057 NDUFS6O75380 124 aaKnown RBP8.78□□□□□ -1
LIMCH1-205ENST00000503057 ZNF324O75467 553 aaPredicted RBP8.78□□□□□ -1
LIMCH1-205ENST00000503057 LY6EQ16553 131 aa8.78□□□□□ -1
LIMCH1-205ENST00000503057 PRELID3AQ96N28 172 aa8.78□□□□□ -1
LIMCH1-205ENST00000503057 MIEN1Q9BRT3 115 aa8.78□□□□□ -1
LIMCH1-205ENST00000503057 LYPD2Q6UXB3 125 aa8.78□□□□□ -1
LIMCH1-205ENST00000503057 NUDT10Q8NFP7 164 aa8.78□□□□□ -1
LIMCH1-205ENST00000503057 NUDT11Q96G61 164 aa8.78□□□□□ -1
LIMCH1-205ENST00000503057 IGHV3-35A0A0C4DH35 117 aa8.78□□□□□ -1
LIMCH1-205ENST00000503057 CDKN1AP38936 164 aa8.78□□□□□ -1
LIMCH1-205ENST00000503057 IGFL2Q6UWQ7 119 aa8.78□□□□□ -1
LIMCH1-205ENST00000503057 TMEM136Q6ZRR5 245 aa8.78□□□□□ -1
LIMCH1-205ENST00000503057 SYT8Q8NBV8 401 aa8.78□□□□□ -1
LIMCH1-205ENST00000503057 SPRY4Q9C004 299 aa8.78□□□□□ -1
LIMCH1-205ENST00000503057 PHLDA3Q9Y5J5 127 aa8.78□□□□□ -1
LIMCH1-205ENST00000503057 F11RQ9Y624 299 aaKnown RBP8.78□□□□□ -1
LIMCH1-205ENST00000503057 OOSP1A8MZH6 123 aa8.77□□□□□ -1
LIMCH1-205ENST00000503057 M0R1W7 72 aa8.77□□□□□ -1
LIMCH1-205ENST00000503057 FER1L5A0AVI2 2057 aa8.77□□□□□ -1
LIMCH1-205ENST00000503057 RTTNQ86VV8 2226 aa8.77□□□□□ -1.01
LIMCH1-205ENST00000503057 SH2D7A6NKC9 451 aaPredicted RBP8.77□□□□□ -1.01
LIMCH1-205ENST00000503057 APOHP02749 345 aaPredicted RBP8.77□□□□□ -1.01
LIMCH1-205ENST00000503057 SRCAPQ6ZRS2 3230 aa8.77□□□□□ -1.01
LIMCH1-205ENST00000503057 SCGB1C2P0DMR2 95 aa8.77□□□□□ -1.01
LIMCH1-205ENST00000503057 FAM19A2Q8N3H0 131 aa8.77□□□□□ -1.01
LIMCH1-205ENST00000503057 RPRMLQ8N4K4 120 aa8.77□□□□□ -1.01
LIMCH1-205ENST00000503057 PSG8Q9UQ74 426 aa8.77□□□□□ -1.01
LIMCH1-205ENST00000503057 SIGLEC9Q9Y336 463 aa8.77□□□□□ -1.01
LIMCH1-205ENST00000503057 A0A1B0GWJ7 208 aa8.77□□□□□ -1.01
LIMCH1-205ENST00000503057 CTAG1AP78358 180 aa8.77□□□□□ -1.01
LIMCH1-205ENST00000503057 C11orf53Q8IXP5 236 aa8.77□□□□□ -1.01
LIMCH1-205ENST00000503057 NEUROG1Q92886 237 aa8.77□□□□□ -1.01
LIMCH1-205ENST00000503057 SRSF8Q9BRL6 282 aaKnown RBP8.77□□□□□ -1.01
LIMCH1-205ENST00000503057 SLC50A1Q9BRV3 221 aa8.77□□□□□ -1.01
LIMCH1-205ENST00000503057 TMEM208Q9BTX3 173 aa8.77□□□□□ -1.01
LIMCH1-205ENST00000503057 GPX1P07203 203 aa8.77□□□□□ -1.01
LIMCH1-205ENST00000503057 PSG1P11464 419 aa8.77□□□□□ -1.01
LIMCH1-205ENST00000503057 CLEC19AQ6UXS0 136 aa8.77□□□□□ -1.01
LIMCH1-205ENST00000503057 ZNF841Q6ZN19 808 aa8.77□□□□□ -1.01
LIMCH1-205ENST00000503057 FAM168AQ92567 244 aa8.77□□□□□ -1.01
LIMCH1-205ENST00000503057 SLC25A39Q9BZJ4 359 aaPredicted RBP8.77□□□□□ -1.01
LIMCH1-205ENST00000503057 IGHV3OR16-10A0A075B7F0 116 aa8.76□□□□□ -1.01
LIMCH1-205ENST00000503057 MINOS1Q5TGZ0 78 aa8.76□□□□□ -1.01
LIMCH1-205ENST00000503057 FAM53AQ6NSI3 398 aaPredicted RBP8.76□□□□□ -1.01
LIMCH1-205ENST00000503057 SCGB1D4Q6XE38 83 aa8.76□□□□□ -1.01
LIMCH1-205ENST00000503057 ZNF600Q6ZNG1 722 aa8.76□□□□□ -1.01
LIMCH1-205ENST00000503057 FER1L6-AS1Q8NA97 138 aa8.76□□□□□ -1.01
LIMCH1-205ENST00000503057 MINOS1-NBL1R4GNA1 71 aa8.76□□□□□ -1.01
LIMCH1-205ENST00000503057 OR4C46A6NHA9 309 aa8.76□□□□□ -1.01
LIMCH1-205ENST00000503057 E7EQL1 145 aa8.76□□□□□ -1.01
LIMCH1-205ENST00000503057 DYNLRB2Q8TF09 96 aa8.76□□□□□ -1.01
LIMCH1-205ENST00000503057 SSBP4Q9BWG4 385 aaPredicted RBP8.76□□□□□ -1.01
LIMCH1-205ENST00000503057 FAM215AQ9Y5M1 114 aa8.76□□□□□ -1.01
LIMCH1-205ENST00000503057 NUDT3O95989 172 aa8.76□□□□□ -1.01
LIMCH1-205ENST00000503057 PYY3Q5JQD4 70 aa8.76□□□□□ -1.01
LIMCH1-205ENST00000503057 ST6GALNAC3Q8NDV1 305 aa8.76□□□□□ -1.01
LIMCH1-205ENST00000503057 NDUFA4L2Q9NRX3 87 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms